RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 HFE2Q6ZVN8 426 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 PRPF38AQ8NAV1 312 aaKnown RBP12.4□□□□□ -0.42
SSX3-204ENST00000612497 ANKS1AQ92625 1134 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 MFSD14AQ96MC6 490 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 ZBED2Q9BTP6 218 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 RAVER2Q9HCJ3 691 aaKnown RBP12.4□□□□□ -0.42
SSX3-204ENST00000612497 FBXO40Q9UH90 709 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 MTUS1Q9ULD2 1270 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 PTPRSQ13332 1948 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 USP34Q70CQ2 3546 aa12.4□□□□□ -0.43
SSX3-204ENST00000612497 TRIP12Q14669 1992 aaPredicted RBP12.39□□□□□ -0.43
SSX3-204ENST00000612497 GRXCR2A6NFK2 248 aa12.39□□□□□ -0.43
SSX3-204ENST00000612497 ATP2A1O14983 1001 aa12.39□□□□□ -0.43
SSX3-204ENST00000612497 SMPD1P17405 629 aa12.39□□□□□ -0.43
SSX3-204ENST00000612497 CDK8P49336 464 aa12.39□□□□□ -0.43
SSX3-204ENST00000612497 SLC9C2Q5TAH2 1124 aa12.39□□□□□ -0.43
SSX3-204ENST00000612497 RETREG2Q8NC44 543 aa12.39□□□□□ -0.43
SSX3-204ENST00000612497 CHST13Q8NET6 341 aa12.39□□□□□ -0.43
SSX3-204ENST00000612497 SUGCTQ9HAC7 445 aa12.39□□□□□ -0.43
SSX3-204ENST00000612497 HOMER2Q9NSB8 354 aa12.39□□□□□ -0.43
SSX3-204ENST00000612497 IQCF3P0C7M6 154 aa12.38□□□□□ -0.43
SSX3-204ENST00000612497 PDE6AP16499 860 aa12.38□□□□□ -0.43
SSX3-204ENST00000612497 PUS10Q3MIT2 529 aaKnown RBP12.38□□□□□ -0.43
SSX3-204ENST00000612497 FAM47CQ5HY64 1035 aa12.38□□□□□ -0.43
SSX3-204ENST00000612497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.38□□□□□ -0.43
SSX3-204ENST00000612497 AMOTL1Q8IY63 956 aa12.38□□□□□ -0.43
SSX3-204ENST00000612497 LCORLQ8N3X6 602 aa12.38□□□□□ -0.43
SSX3-204ENST00000612497 KIFC2Q96AC6 838 aa12.38□□□□□ -0.43
SSX3-204ENST00000612497 EAF2Q96CJ1 260 aaPredicted RBP12.38□□□□□ -0.43
SSX3-204ENST00000612497 PDGFCQ9NRA1 345 aa12.38□□□□□ -0.43
SSX3-204ENST00000612497 TANC1Q9C0D5 1861 aa12.38□□□□□ -0.43
SSX3-204ENST00000612497 SIP14410 1827 aa12.37□□□□□ -0.43
SSX3-204ENST00000612497 CYP2D7A0A087X1C5 515 aa12.37□□□□□ -0.43
SSX3-204ENST00000612497 ASB14A6NK59 587 aa12.37□□□□□ -0.43
SSX3-204ENST00000612497 H3BQ06 376 aaPredicted RBP12.37□□□□□ -0.43
SSX3-204ENST00000612497 BAIAP3O94812 1187 aa12.37□□□□□ -0.43
SSX3-204ENST00000612497 POLA2Q14181 598 aa12.37□□□□□ -0.43
SSX3-204ENST00000612497 IQSEC1Q6DN90 963 aa12.37□□□□□ -0.43
SSX3-204ENST00000612497 EEPD1Q7L9B9 569 aa12.37□□□□□ -0.43
SSX3-204ENST00000612497 TMCO2Q7Z6W1 182 aaPredicted RBP12.37□□□□□ -0.43
SSX3-204ENST00000612497 FAM133AQ8N9E0 248 aa12.37□□□□□ -0.43
SSX3-204ENST00000612497 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.37□□□□□ -0.43
SSX3-204ENST00000612497 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
SSX3-204ENST00000612497 ARMT1Q9H993 441 aa12.37□□□□□ -0.43
SSX3-204ENST00000612497 ZNF532Q9HCE3 1301 aa12.37□□□□□ -0.43
SSX3-204ENST00000612497 C5orf42Q9H799 3197 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 F5H6K3 240 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 PITPNM1O00562 1244 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 ANP32CO43423 234 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 PRKAB2O43741 272 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 BCAR3O75815 825 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 MYL3P08590 195 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 ERVK-21P61565 698 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 FOXK2Q01167 660 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 KLRC3Q07444 240 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
SSX3-204ENST00000612497 TMEM63BQ5T3F8 832 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 C12orf60Q5U649 245 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 EP400NLQ6ZTU2 488 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 C16orf86Q6ZW13 317 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 FBXO16Q8IX29 292 aaPredicted RBP12.36□□□□□ -0.43
SSX3-204ENST00000612497 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 UPF3BQ9BZI7 483 aaKnown RBP12.36□□□□□ -0.43
SSX3-204ENST00000612497 SLC38A10Q9HBR0 1119 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 POLR3EQ9NVU0 708 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 FAM50BQ9Y247 325 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 COG6Q9Y2V7 657 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 Q9Y3F1 56 aa12.36□□□□□ -0.43
SSX3-204ENST00000612497 DDX49Q9Y6V7 483 aaKnown RBP12.36□□□□□ -0.43
SSX3-204ENST00000612497 MYH4Q9Y623 1939 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 SOWAHBA6NEL2 793 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 USP17L12C9JPN9 530 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 USP17L21D6R901 530 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 NDUFB10O96000 172 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 CT47B1P0C2W7 299 aaPredicted RBP12.35□□□□□ -0.43
SSX3-204ENST00000612497 PTPN5P54829 565 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 WDR5P61964 334 aaKnown RBP12.35□□□□□ -0.43
SSX3-204ENST00000612497 ZP2Q05996 745 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 BFSP2Q13515 415 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 TAPT1Q6NXT6 567 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 KIAA1211Q6ZU35 1233 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 PRSS33Q8NF86 280 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 PPP1R13LQ8WUF5 828 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 ARHGAP45Q92619 1136 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 GPHNQ9NQX3 736 aaPredicted RBP12.35□□□□□ -0.43
SSX3-204ENST00000612497 ATP8A2Q9NTI2 1148 aa12.35□□□□□ -0.43
SSX3-204ENST00000612497 SPTBN4Q9H254 2564 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 LINC01553A4QN01 128 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 OAZ1P54368 228 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 ATP8B2P98198 1209 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 PURAQ00577 322 aaKnown RBP12.34□□□□□ -0.43
SSX3-204ENST00000612497 NBPF20Q3BBV1 942 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 NEK9Q8TD19 979 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 SSH3Q8TE77 659 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 DDRGK1Q96HY6 314 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 RAD9AQ99638 391 aa12.34□□□□□ -0.43
SSX3-204ENST00000612497 MTG1Q9BT17 334 aaPredicted RBP12.34□□□□□ -0.43
SSX3-204ENST00000612497 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms