RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 XPNPEP3Q9NQH7 507 aa15.61■□□□□ 0.09
SENP3-209ENST00000610454 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.61■□□□□ 0.09
SENP3-209ENST00000610454 ADD3Q9UEY8 706 aaKnown RBP15.61■□□□□ 0.09
SENP3-209ENST00000610454 FAM184BQ9ULE4 1060 aa15.61■□□□□ 0.09
SENP3-209ENST00000610454 SMCHD1A6NHR9 2005 aa15.6■□□□□ 0.09
SENP3-209ENST00000610454 KLRF2D3W0D1 207 aa15.6■□□□□ 0.09
SENP3-209ENST00000610454 PRC1O43663 620 aa15.6■□□□□ 0.09
SENP3-209ENST00000610454 TAL1P17542 331 aaPredicted RBP15.6■□□□□ 0.09
SENP3-209ENST00000610454 NECTIN1Q15223 517 aa15.6■□□□□ 0.09
SENP3-209ENST00000610454 RNF207Q6ZRF8 634 aa15.6■□□□□ 0.09
SENP3-209ENST00000610454 CCDC144CPQ8IYA2 1237 aa15.6■□□□□ 0.09
SENP3-209ENST00000610454 FAM133AQ8N9E0 248 aa15.6■□□□□ 0.09
SENP3-209ENST00000610454 TMEM87BQ96K49 555 aa15.6■□□□□ 0.09
SENP3-209ENST00000610454 MPHOSPH6Q99547 160 aaKnown RBP15.6■□□□□ 0.09
SENP3-209ENST00000610454 MTA3Q9BTC8 594 aa15.6■□□□□ 0.09
SENP3-209ENST00000610454 ABCB11O95342 1321 aa15.6■□□□□ 0.09
SENP3-209ENST00000610454 CCDC69A6NI79 296 aa15.59■□□□□ 0.09
SENP3-209ENST00000610454 NFIBO00712 420 aa15.59■□□□□ 0.09
SENP3-209ENST00000610454 SNAI1O95863 264 aaPredicted RBP15.59■□□□□ 0.09
SENP3-209ENST00000610454 ZNF865P0CJ78 1059 aaPredicted RBP15.59■□□□□ 0.09
SENP3-209ENST00000610454 CALML3P27482 149 aa15.59■□□□□ 0.09
SENP3-209ENST00000610454 MNX1P50219 401 aaPredicted RBP15.59■□□□□ 0.09
SENP3-209ENST00000610454 ACVR2BQ13705 512 aa15.59■□□□□ 0.09
SENP3-209ENST00000610454 BAATQ14032 418 aaPredicted RBP15.59■□□□□ 0.09
SENP3-209ENST00000610454 GRM4Q14833 912 aa15.59■□□□□ 0.09
SENP3-209ENST00000610454 GJC2Q5T442 439 aaPredicted RBP15.59■□□□□ 0.09
SENP3-209ENST00000610454 RNF180Q86T96 592 aa15.59■□□□□ 0.09
SENP3-209ENST00000610454 FBXO11Q86XK2 927 aa15.59■□□□□ 0.09
SENP3-209ENST00000610454 TMTC2Q8N394 836 aa15.59■□□□□ 0.09
SENP3-209ENST00000610454 NUP133Q8WUM0 1156 aa15.59■□□□□ 0.09
SENP3-209ENST00000610454 SENP6Q9GZR1 1112 aaPredicted RBP15.59■□□□□ 0.09
SENP3-209ENST00000610454 SOWAHBA6NEL2 793 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 B4DLN1 442 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 H0YGN5 161 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 REC8O95072 547 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 KIF5BP33176 963 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 MRPL12P52815 198 aaKnown RBP15.58■□□□□ 0.08
SENP3-209ENST00000610454 ANTXR2P58335 489 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 TRAF1Q13077 416 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 KRT32Q14532 448 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 QRICH1Q2TAL8 776 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 C7orf61Q8IZ16 206 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 STAG2Q8N3U4 1231 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 CTCFLQ8NI51 663 aaPredicted RBP15.58■□□□□ 0.08
SENP3-209ENST00000610454 FGD4Q96M96 766 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 SPC25Q9HBM1 224 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 MAD2L2Q9UI95 211 aa15.58■□□□□ 0.08
SENP3-209ENST00000610454 ALPK3Q96L96 1907 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 DDAH1O94760 285 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 COL6A1P12109 1028 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 LRRC41Q15345 812 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 CCDC144BQ3MJ40 725 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 NOL8Q76FK4 1167 aaKnown RBP15.57■□□□□ 0.08
SENP3-209ENST00000610454 HOMER1Q86YM7 354 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 MCF2L2Q86YR7 1114 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 ZNF654Q8IZM8 581 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 IGDCC4Q8TDY8 1250 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 CLEC4DQ8WXI8 215 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 AMNQ9BXJ7 453 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 JMJD4Q9H9V9 463 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 LY9Q9HBG7 655 aa15.57■□□□□ 0.08
SENP3-209ENST00000610454 MRPL11Q9Y3B7 192 aaKnown RBP15.57■□□□□ 0.08
SENP3-209ENST00000610454 DNAH12Q6ZR08 3092 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 LOC102724159A0A0B4J2E5 919 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 PALM3A6NDB9 673 aaPredicted RBP15.56■□□□□ 0.08
SENP3-209ENST00000610454 ZBTB5O15062 677 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 PGK1P00558 417 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 CALM1P0DP23 149 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 CALM2P0DP24 149 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 CALM3P0DP25 149 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 ALDH5A1P51649 535 aaPredicted RBP15.56■□□□□ 0.08
SENP3-209ENST00000610454 RPS6P62753 249 aaKnown RBP15.56■□□□□ 0.08
SENP3-209ENST00000610454 TROAPQ12815 778 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 PWP2Q15269 919 aaKnown RBP15.56■□□□□ 0.08
SENP3-209ENST00000610454 SLC30A10Q6XR72 485 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 SYNE3Q6ZMZ3 975 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 NEK1Q96PY6 1258 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 MAF1Q9H063 256 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 SENP2Q9HC62 589 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 LCTP09848 1927 aa15.56■□□□□ 0.08
SENP3-209ENST00000610454 SYNRGQ9UMZ2 1314 aa15.55■□□□□ 0.08
SENP3-209ENST00000610454 SH2B2O14492 632 aaPredicted RBP15.55■□□□□ 0.08
SENP3-209ENST00000610454 DUSP11O75319 330 aaKnown RBP15.55■□□□□ 0.08
SENP3-209ENST00000610454 GNAQP50148 359 aa15.55■□□□□ 0.08
SENP3-209ENST00000610454 ATN1P54259 1190 aaPredicted RBP15.55■□□□□ 0.08
SENP3-209ENST00000610454 PDE4DQ08499 809 aa15.55■□□□□ 0.08
SENP3-209ENST00000610454 EEPD1Q7L9B9 569 aa15.55■□□□□ 0.08
SENP3-209ENST00000610454 RGS22Q8NE09 1264 aa15.55■□□□□ 0.08
SENP3-209ENST00000610454 DNERQ8NFT8 737 aa15.55■□□□□ 0.08
SENP3-209ENST00000610454 LENG1Q96BZ8 264 aaPredicted RBP15.55■□□□□ 0.08
SENP3-209ENST00000610454 MAP3K14Q99558 947 aa15.55■□□□□ 0.08
SENP3-209ENST00000610454 VTA1Q9NP79 307 aa15.55■□□□□ 0.08
SENP3-209ENST00000610454 SLC12A7Q9Y666 1083 aa15.55■□□□□ 0.08
SENP3-209ENST00000610454 LRRC37A2A6NM11 1700 aa15.54■□□□□ 0.08
SENP3-209ENST00000610454 HMGB1P09429 215 aaKnown RBP15.54■□□□□ 0.08
SENP3-209ENST00000610454 C6orf222P0C671 652 aaPredicted RBP15.54■□□□□ 0.08
SENP3-209ENST00000610454 ADCYAP1R1P41586 468 aa15.54■□□□□ 0.08
SENP3-209ENST00000610454 LIFRP42702 1097 aa15.54■□□□□ 0.08
SENP3-209ENST00000610454 FGD1P98174 961 aa15.54■□□□□ 0.08
SENP3-209ENST00000610454 TNFAIP2Q03169 654 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms