RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 SLC9C2Q5TAH2 1124 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 SPATA1Q5VX52 437 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 KRT40Q6A162 431 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 FMNL3Q8IVF7 1028 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 USHBP1Q8N6Y0 703 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 NCOA7Q8NI08 942 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 KAZALD1Q96I82 304 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 SLF1Q9BQI6 1058 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 CARD10Q9BWT7 1032 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 COPRSQ9NQ92 184 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 PCDHB11Q9Y5F2 797 aa7.22□□□□□ -1.25
SRGAP2-211ENST00000604423 MYO5AQ9Y4I1 1855 aaKnown RBP7.21□□□□□ -1.25
SRGAP2-211ENST00000604423 LTN1O94822 1766 aa7.21□□□□□ -1.25
SRGAP2-211ENST00000604423 PARP4Q9UKK3 1724 aaKnown RBP7.21□□□□□ -1.25
SRGAP2-211ENST00000604423 PSMD14O00487 310 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 ENC1O14682 589 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 SPINT1O43278 529 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 KCNQ3O43525 872 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 ADH1AP07327 375 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 SCP2P22307 547 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 CCT6AP40227 531 aaKnown RBP7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 HAND2P61296 217 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 SPECC1Q5M775 1068 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 NT5DC1Q5TFE4 455 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 TTC19Q6DKK2 380 aaPredicted RBP7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 SND1Q7KZF4 910 aaKnown RBP eCLIP7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 KIAA1328Q86T90 577 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 IQCA1Q86XH1 822 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 TICAM2Q86XR7 235 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 FOXP4Q8IVH2 680 aaPredicted RBP7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 RUBCNQ92622 972 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 JAKMIP2Q96AA8 810 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 NEUROD6Q96NK8 337 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 MAP3K14Q99558 947 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 HAUS4Q9H6D7 363 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 CD248Q9HCU0 757 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 ADD3Q9UEY8 706 aaKnown RBP7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 SERTAD1Q9UHV2 236 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 MCM8Q9UJA3 840 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 ODF2LQ9ULJ1 636 aa7.21□□□□□ -1.26
SRGAP2-211ENST00000604423 ROBO2Q9HCK4 1378 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 A0A0G2JLW4 131 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 A0A1B0GUA9 196 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 PPP1R12AO14974 1030 aaPredicted RBP7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 N4BP3O15049 544 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 RNF113AO15541 343 aaKnown RBP7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 KRT86O43790 486 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 NEBLO76041 1014 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 EZRP15311 586 aaKnown RBP7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 GCFC2P16383 781 aaKnown RBP7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 ERCC3P19447 782 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 FXR1P51114 621 aaKnown RBP eCLIP7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 STX17P56962 302 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 ERVK-24P63145 666 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 PLCB4Q15147 1175 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 PROSER3Q2NL68 480 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 PREPLQ4J6C6 727 aaPredicted RBP7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 C1orf141Q5JVX7 400 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 CCDC122Q5T0U0 273 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 CCDC50Q8IVM0 306 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 TEX11Q8IYF3 940 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 ZKSCAN4Q969J2 545 aaPredicted RBP7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 MMS19Q96T76 1030 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 CEP131Q9UPN4 1083 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 DIP2BQ9P265 1576 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 NWD2Q9ULI1 1742 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 CPDO75976 1380 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 AGPSO00116 658 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 ZEB2O60315 1214 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 NDUFA10O95299 355 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 ATP1A1P05023 1023 aaKnown RBP7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 PBX1P40424 430 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 KRT83P78385 493 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 SPAG1Q07617 926 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 PDCLQ13371 301 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 SNCBQ16143 134 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 WASHC4Q2M389 1173 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 CCDC40Q4G0X9 1142 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 HSP90AB3PQ58FF7 597 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 ZNF530Q6P9A1 599 aaPredicted RBP7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 CCNI2Q6ZMN8 369 aaPredicted RBP7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 KDF1Q8NAX2 398 aaPredicted RBP7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 SLC16A10Q8TF71 515 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 TBC1D22AQ8WUA7 517 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 WASF1Q92558 559 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 MIEF2Q96C03 454 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 POM121Q96HA1 1249 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 EHD4Q9H223 541 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 VCPKMTQ9H867 229 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 LGR6Q9HBX8 967 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 JADE2Q9NQC1 790 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 KLC4Q9NSK0 619 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 HDAC6Q9UBN7 1215 aa7.2□□□□□ -1.26
SRGAP2-211ENST00000604423 WDR19Q8NEZ3 1342 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 NEURL1BA8MQ27 555 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 PATL2C9JE40 543 aaKnown RBP7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 M0R2C6 588 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 ZNF213O14771 459 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 SRGAP2O75044 1071 aa7.19□□□□□ -1.26
SRGAP2-211ENST00000604423 IFIT1P09914 478 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms