RNA–Protein interactions for RNA: ENST00000602660.1

SFXN2-208, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 667 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-208ENST00000602660 CCDC144CPQ8IYA2 1237 aa18.68■□□□□ 0.58
SFXN2-208ENST00000602660 STAG2Q8N3U4 1231 aa18.68■□□□□ 0.58
SFXN2-208ENST00000602660 NCOA7Q8NI08 942 aa18.68■□□□□ 0.58
SFXN2-208ENST00000602660 CNPY2Q9Y2B0 182 aa18.68■□□□□ 0.58
SFXN2-208ENST00000602660 AKR1A1P14550 325 aa18.67■□□□□ 0.58
SFXN2-208ENST00000602660 SLC35G1Q2M3R5 365 aa18.67■□□□□ 0.58
SFXN2-208ENST00000602660 ADGRF4Q8IZF3 695 aa18.67■□□□□ 0.58
SFXN2-208ENST00000602660 PRO3102Q9H379 93 aa18.67■□□□□ 0.58
SFXN2-208ENST00000602660 COLQQ9Y215 455 aaPredicted RBP18.67■□□□□ 0.58
SFXN2-208ENST00000602660 NR2E3Q9Y5X4 410 aa18.67■□□□□ 0.58
SFXN2-208ENST00000602660 SCN10AQ9Y5Y9 1956 aa18.66■□□□□ 0.58
SFXN2-208ENST00000602660 SLC27A2O14975 620 aa18.66■□□□□ 0.58
SFXN2-208ENST00000602660 ADAMTS4O75173 837 aa18.66■□□□□ 0.58
SFXN2-208ENST00000602660 PARP1P09874 1014 aaKnown RBP18.66■□□□□ 0.58
SFXN2-208ENST00000602660 ACVR2BQ13705 512 aa18.66■□□□□ 0.58
SFXN2-208ENST00000602660 CDC37Q16543 378 aaPredicted RBP18.66■□□□□ 0.58
SFXN2-208ENST00000602660 NSMFQ6X4W1 530 aa18.66■□□□□ 0.58
SFXN2-208ENST00000602660 C7orf61Q8IZ16 206 aa18.66■□□□□ 0.58
SFXN2-208ENST00000602660 ARRDC4Q8NCT1 418 aa18.66■□□□□ 0.58
SFXN2-208ENST00000602660 IGDCC4Q8TDY8 1250 aa18.66■□□□□ 0.58
SFXN2-208ENST00000602660 SENP6Q9GZR1 1112 aaPredicted RBP18.66■□□□□ 0.58
SFXN2-208ENST00000602660 ABHD16BQ9H3Z7 469 aa18.66■□□□□ 0.58
SFXN2-208ENST00000602660 JMJD4Q9H9V9 463 aa18.66■□□□□ 0.58
SFXN2-208ENST00000602660 MAD2L2Q9UI95 211 aa18.66■□□□□ 0.58
SFXN2-208ENST00000602660 PALM3A6NDB9 673 aaPredicted RBP18.65■□□□□ 0.58
SFXN2-208ENST00000602660 IFIT3O14879 490 aaKnown RBP18.65■□□□□ 0.58
SFXN2-208ENST00000602660 PGK1P00558 417 aa18.65■□□□□ 0.58
SFXN2-208ENST00000602660 RARBP10826 455 aa18.65■□□□□ 0.58
SFXN2-208ENST00000602660 BAATQ14032 418 aaPredicted RBP18.65■□□□□ 0.58
SFXN2-208ENST00000602660 CCDC144BQ3MJ40 725 aa18.65■□□□□ 0.58
SFXN2-208ENST00000602660 SLC30A10Q6XR72 485 aa18.65■□□□□ 0.58
SFXN2-208ENST00000602660 KIAA1211Q6ZU35 1233 aa18.65■□□□□ 0.58
SFXN2-208ENST00000602660 RALYLQ86SE5 291 aaKnown RBP18.65■□□□□ 0.58
SFXN2-208ENST00000602660 MORC4Q8TE76 937 aa18.65■□□□□ 0.58
SFXN2-208ENST00000602660 XPNPEP3Q9NQH7 507 aa18.65■□□□□ 0.58
SFXN2-208ENST00000602660 GPHNQ9NQX3 736 aaPredicted RBP18.65■□□□□ 0.58
SFXN2-208ENST00000602660 PCDH10Q9P2E7 1040 aa18.65■□□□□ 0.58
SFXN2-208ENST00000602660 ZHX1Q9UKY1 873 aaPredicted RBP18.65■□□□□ 0.58
SFXN2-208ENST00000602660 SYNRGQ9UMZ2 1314 aa18.65■□□□□ 0.58
SFXN2-208ENST00000602660 TRIP12Q14669 1992 aaPredicted RBP18.64■□□□□ 0.58
SFXN2-208ENST00000602660 SZT2Q5T011 3432 aa18.64■□□□□ 0.57
SFXN2-208ENST00000602660 IRX5P78411 483 aaPredicted RBP18.64■□□□□ 0.57
SFXN2-208ENST00000602660 TROAPQ12815 778 aa18.64■□□□□ 0.57
SFXN2-208ENST00000602660 GRM4Q14833 912 aa18.64■□□□□ 0.57
SFXN2-208ENST00000602660 QRICH1Q2TAL8 776 aa18.64■□□□□ 0.57
SFXN2-208ENST00000602660 HABP4Q5JVS0 413 aaKnown RBP18.64■□□□□ 0.57
SFXN2-208ENST00000602660 CREB3L3Q68CJ9 461 aa18.64■□□□□ 0.57
SFXN2-208ENST00000602660 MTMR8Q96EF0 704 aa18.64■□□□□ 0.57
SFXN2-208ENST00000602660 ANO2Q9NQ90 1003 aa18.64■□□□□ 0.57
SFXN2-208ENST00000602660 PNMA2Q9UL42 364 aa18.64■□□□□ 0.57
SFXN2-208ENST00000602660 MYADML2A6NDP7 307 aa18.63■□□□□ 0.57
SFXN2-208ENST00000602660 ASB14A6NK59 587 aa18.63■□□□□ 0.57
SFXN2-208ENST00000602660 KBTBD13C9JR72 458 aa18.63■□□□□ 0.57
SFXN2-208ENST00000602660 CDC45O75419 566 aa18.63■□□□□ 0.57
SFXN2-208ENST00000602660 WTAPQ15007 396 aa18.63■□□□□ 0.57
SFXN2-208ENST00000602660 USH1GQ495M9 461 aa18.63■□□□□ 0.57
SFXN2-208ENST00000602660 CHRDL2Q6WN34 429 aa18.63■□□□□ 0.57
SFXN2-208ENST00000602660 KLHDC9Q8NEP7 349 aa18.63■□□□□ 0.57
SFXN2-208ENST00000602660 LY9Q9HBG7 655 aa18.63■□□□□ 0.57
SFXN2-208ENST00000602660 FAM184BQ9ULE4 1060 aa18.63■□□□□ 0.57
SFXN2-208ENST00000602660 ZMYND8Q9ULU4 1186 aaPredicted RBP18.63■□□□□ 0.57
SFXN2-208ENST00000602660 PHF24Q9UPV7 400 aa18.63■□□□□ 0.57
SFXN2-208ENST00000602660 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.62■□□□□ 0.57
SFXN2-208ENST00000602660 PTPDC1A2A3K4 754 aa18.62■□□□□ 0.57
SFXN2-208ENST00000602660 KLRF2D3W0D1 207 aa18.62■□□□□ 0.57
SFXN2-208ENST00000602660 CTAGE5O15320 804 aa18.62■□□□□ 0.57
SFXN2-208ENST00000602660 PPP1R11O60927 126 aaPredicted RBP18.62■□□□□ 0.57
SFXN2-208ENST00000602660 DUSP11O75319 330 aaKnown RBP18.62■□□□□ 0.57
SFXN2-208ENST00000602660 ADCYAP1R1P41586 468 aa18.62■□□□□ 0.57
SFXN2-208ENST00000602660 ALDH5A1P51649 535 aaPredicted RBP18.62■□□□□ 0.57
SFXN2-208ENST00000602660 ATN1P54259 1190 aaPredicted RBP18.62■□□□□ 0.57
SFXN2-208ENST00000602660 RPS6P62753 249 aaKnown RBP18.62■□□□□ 0.57
SFXN2-208ENST00000602660 SNX17Q15036 470 aa18.62■□□□□ 0.57
SFXN2-208ENST00000602660 TMEM67Q5HYA8 995 aa18.62■□□□□ 0.57
SFXN2-208ENST00000602660 CCSAPQ6IQ19 270 aaPredicted RBP18.62■□□□□ 0.57
SFXN2-208ENST00000602660 RNF207Q6ZRF8 634 aa18.62■□□□□ 0.57
SFXN2-208ENST00000602660 TBC1D5Q92609 795 aa18.62■□□□□ 0.57
SFXN2-208ENST00000602660 UPF3AQ9H1J1 476 aaKnown RBP18.62■□□□□ 0.57
SFXN2-208ENST00000602660 OPLAHO14841 1288 aa18.61■□□□□ 0.57
SFXN2-208ENST00000602660 CYTH3O43739 400 aa18.61■□□□□ 0.57
SFXN2-208ENST00000602660 MYCNP04198 464 aaPredicted RBP18.61■□□□□ 0.57
SFXN2-208ENST00000602660 SYN1P17600 705 aa18.61■□□□□ 0.57
SFXN2-208ENST00000602660 PTGS1P23219 599 aa18.61■□□□□ 0.57
SFXN2-208ENST00000602660 TAPT1Q6NXT6 567 aa18.61■□□□□ 0.57
SFXN2-208ENST00000602660 RGS22Q8NE09 1264 aa18.61■□□□□ 0.57
SFXN2-208ENST00000602660 VAT1LQ9HCJ6 419 aa18.61■□□□□ 0.57
SFXN2-208ENST00000602660 PDGFCQ9NRA1 345 aa18.61■□□□□ 0.57
SFXN2-208ENST00000602660 RBM27Q9P2N5 1060 aaKnown RBP18.61■□□□□ 0.57
SFXN2-208ENST00000602660 ABCB11O95342 1321 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 ERICH2A1L162 156 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 PRC1O43663 620 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 CALML3P27482 149 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 CST5P28325 142 aaPredicted RBP18.6■□□□□ 0.57
SFXN2-208ENST00000602660 RTP1P59025 263 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 TMEM63BQ5T3F8 832 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 SLC39A5Q6ZMH5 540 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 RNF180Q86T96 592 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 FBXO16Q8IX29 292 aaPredicted RBP18.6■□□□□ 0.57
SFXN2-208ENST00000602660 FERMT2Q96AC1 680 aa18.6■□□□□ 0.57
SFXN2-208ENST00000602660 GDF15Q99988 308 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms