RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 UPF3BQ9BZI7 483 aaKnown RBP15.08■□□□□ 0
SRRM1-223ENST00000600523 RIOX1Q9H6W3 641 aa15.08■□□□□ 0
SRRM1-223ENST00000600523 PTPDC1A2A3K4 754 aa15.07■□□□□ 0
SRRM1-223ENST00000600523 B4DLN1 442 aa15.07■□□□□ 0
SRRM1-223ENST00000600523 PGK2P07205 417 aa15.07■□□□□ 0
SRRM1-223ENST00000600523 RXRAP19793 462 aa15.07■□□□□ 0
SRRM1-223ENST00000600523 MRPL12P52815 198 aaKnown RBP15.07■□□□□ 0
SRRM1-223ENST00000600523 APOBRQ0VD83 1088 aa15.07■□□□□ 0
SRRM1-223ENST00000600523 OLFML2BQ68BL8 750 aa15.07■□□□□ 0
SRRM1-223ENST00000600523 CPLX2Q6PUV4 134 aaKnown RBP15.07■□□□□ 0
SRRM1-223ENST00000600523 MSL3Q8N5Y2 521 aaKnown RBP15.07■□□□□ 0
SRRM1-223ENST00000600523 HMX1Q9NP08 348 aaPredicted RBP15.07■□□□□ 0
SRRM1-223ENST00000600523 ADD3Q9UEY8 706 aaKnown RBP15.07■□□□□ 0
SRRM1-223ENST00000600523 PCDHA1Q9Y5I3 950 aa15.07■□□□□ 0
SRRM1-223ENST00000600523 SEC24BO95487 1268 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 MYCP01106 439 aaPredicted RBP15.06■□□□□ 0
SRRM1-223ENST00000600523 CAPN2P17655 700 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 AKAP17AQ02040 695 aaKnown RBP15.06■□□□□ 0
SRRM1-223ENST00000600523 RNF207Q6ZRF8 634 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 TMTC3Q6ZXV5 915 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 RAB11FIP4Q86YS3 637 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 TRIB2Q92519 343 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 MAML3Q96JK9 1138 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 PIGSQ96S52 555 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 AGXT2Q9BYV1 514 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 C22orf23Q9BZE7 217 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 RNF208Q9H0X6 261 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 RBM27Q9P2N5 1060 aaKnown RBP15.06■□□□□ 0
SRRM1-223ENST00000600523 BRPF3Q9ULD4 1205 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 CNPY2Q9Y2B0 182 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 RPTORQ8N122 1335 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 PLXNB2O15031 1838 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 ZNF236Q9UL36 1845 aa15.06■□□□□ 0
SRRM1-223ENST00000600523 CPLX1O14810 134 aa15.05■□□□□ -0
SRRM1-223ENST00000600523 COBLO75128 1261 aa15.05■□□□□ -0
SRRM1-223ENST00000600523 CCL5P13501 91 aa15.05■□□□□ -0
SRRM1-223ENST00000600523 PRKAR2AP13861 404 aaKnown RBP15.05■□□□□ -0
SRRM1-223ENST00000600523 COL9A3Q14050 684 aaPredicted RBP15.05■□□□□ -0
SRRM1-223ENST00000600523 MUM1L1Q5H9M0 696 aa15.05■□□□□ -0
SRRM1-223ENST00000600523 ZNF467Q7Z7K2 595 aaPredicted RBP15.05■□□□□ -0
SRRM1-223ENST00000600523 CCDC82Q8N4S0 544 aa15.05■□□□□ -0
SRRM1-223ENST00000600523 RGS22Q8NE09 1264 aa15.05■□□□□ -0
SRRM1-223ENST00000600523 IL27Q8NEV9 243 aa15.05■□□□□ -0
SRRM1-223ENST00000600523 NPLOC4Q8TAT6 608 aa15.05■□□□□ -0
SRRM1-223ENST00000600523 PIBF1Q8WXW3 757 aa15.05■□□□□ -0
SRRM1-223ENST00000600523 MTMR8Q96EF0 704 aa15.05■□□□□ -0
SRRM1-223ENST00000600523 A1CFQ9NQ94 594 aaKnown RBP15.05■□□□□ -0
SRRM1-223ENST00000600523 ASB14A6NK59 587 aa15.04■□□□□ -0
SRRM1-223ENST00000600523 CAPN15O75808 1086 aa15.04■□□□□ -0
SRRM1-223ENST00000600523 PLEKHA8P1O95397 391 aa15.04■□□□□ -0
SRRM1-223ENST00000600523 CALML3P27482 149 aa15.04■□□□□ -0
SRRM1-223ENST00000600523 NEK4P51957 841 aa15.04■□□□□ -0
SRRM1-223ENST00000600523 CCL14Q16627 93 aa15.04■□□□□ -0
SRRM1-223ENST00000600523 ZNF792Q3KQV3 632 aa15.04■□□□□ -0
SRRM1-223ENST00000600523 SAMD3Q8N6K7 520 aa15.04■□□□□ -0
SRRM1-223ENST00000600523 ZNF274Q96GC6 653 aaPredicted RBP15.04■□□□□ -0
SRRM1-223ENST00000600523 TINF2Q9BSI4 451 aa15.04■□□□□ -0
SRRM1-223ENST00000600523 MAP3K20Q9NYL2 800 aaKnown RBP15.04■□□□□ -0
SRRM1-223ENST00000600523 CYP39A1Q9NYL5 469 aa15.04■□□□□ -0
SRRM1-223ENST00000600523 NRBP1Q9UHY1 535 aa15.04■□□□□ -0
SRRM1-223ENST00000600523 SYNGAP1Q96PV0 1343 aa15.03■□□□□ -0
SRRM1-223ENST00000600523 DNAJC25-GNG10A0A024R161 153 aa15.03■□□□□ -0
SRRM1-223ENST00000600523 LOC102724159A0A0B4J2E5 919 aa15.03■□□□□ -0
SRRM1-223ENST00000600523 NFIBO00712 420 aa15.03■□□□□ -0
SRRM1-223ENST00000600523 CYTH3O43739 400 aa15.03■□□□□ -0
SRRM1-223ENST00000600523 MSCO60682 206 aa15.03■□□□□ -0
SRRM1-223ENST00000600523 CNGA1P29973 690 aa15.03■□□□□ -0
SRRM1-223ENST00000600523 BAATQ14032 418 aaPredicted RBP15.03■□□□□ -0
SRRM1-223ENST00000600523 PWP2Q15269 919 aaKnown RBP15.03■□□□□ -0
SRRM1-223ENST00000600523 SRBD1Q8N5C6 995 aaKnown RBP15.03■□□□□ -0
SRRM1-223ENST00000600523 CUL5Q93034 780 aa15.03■□□□□ -0
SRRM1-223ENST00000600523 IL17RAQ96F46 866 aa15.03■□□□□ -0
SRRM1-223ENST00000600523 ALDH8A1Q9H2A2 487 aaPredicted RBP15.03■□□□□ -0
SRRM1-223ENST00000600523 DOCK3Q8IZD9 2030 aa15.02■□□□□ -0
SRRM1-223ENST00000600523 hCG_1984214I3L0E3 225 aa15.02■□□□□ -0
SRRM1-223ENST00000600523 CDKL5O76039 1030 aa15.02■□□□□ -0
SRRM1-223ENST00000600523 CFBP00751 764 aa15.02■□□□□ -0
SRRM1-223ENST00000600523 GJB1P08034 283 aa15.02■□□□□ -0
SRRM1-223ENST00000600523 PDIA3P30101 505 aaKnown RBP15.02■□□□□ -0
SRRM1-223ENST00000600523 CYP2C19P33261 490 aa15.02■□□□□ -0
SRRM1-223ENST00000600523 EVCP57679 992 aa15.02■□□□□ -0
SRRM1-223ENST00000600523 TOB2Q14106 344 aaPredicted RBP15.02■□□□□ -0
SRRM1-223ENST00000600523 TRIM22Q8IYM9 498 aa15.02■□□□□ -0
SRRM1-223ENST00000600523 CMTR1Q8N1G2 835 aaKnown RBP15.02■□□□□ -0
SRRM1-223ENST00000600523 ZNF713Q8N859 430 aaPredicted RBP15.02■□□□□ -0
SRRM1-223ENST00000600523 FAM133AQ8N9E0 248 aa15.02■□□□□ -0
SRRM1-223ENST00000600523 CLEC4DQ8WXI8 215 aa15.02■□□□□ -0
SRRM1-223ENST00000600523 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.02■□□□□ -0
SRRM1-223ENST00000600523 UNC93B1Q9H1C4 597 aa15.02■□□□□ -0
SRRM1-223ENST00000600523 SLKQ9H2G2 1235 aaPredicted RBP15.02■□□□□ -0
SRRM1-223ENST00000600523 GCOM1H8Y6P7 765 aaPredicted RBP15.01□□□□□ -0.01
SRRM1-223ENST00000600523 POLR2MP0CAP2 368 aa15.01□□□□□ -0.01
SRRM1-223ENST00000600523 RBM25P49756 843 aaKnown RBP15.01□□□□□ -0.01
SRRM1-223ENST00000600523 RPS6P62753 249 aaKnown RBP15.01□□□□□ -0.01
SRRM1-223ENST00000600523 CCT2P78371 535 aaKnown RBP15.01□□□□□ -0.01
SRRM1-223ENST00000600523 CACNB2Q08289 660 aaPredicted RBP15.01□□□□□ -0.01
SRRM1-223ENST00000600523 MTFR1Q15390 333 aa15.01□□□□□ -0.01
SRRM1-223ENST00000600523 MAP3K21Q5TCX8 1036 aa15.01□□□□□ -0.01
SRRM1-223ENST00000600523 MAMDC4Q6UXC1 1216 aa15.01□□□□□ -0.01
SRRM1-223ENST00000600523 HEATR3Q7Z4Q2 680 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms