RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 ZNF792Q3KQV3 632 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 MUM1L1Q5H9M0 696 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 WDR78Q5VTH9 848 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 FBXO11Q86XK2 927 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 TBC1D32Q96NH3 1257 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 PIGSQ96S52 555 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 AMNQ9BXJ7 453 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 UPF2Q9HAU5 1272 aaKnown RBP16.95■□□□□ 0.3
LTBP4-228ENST00000600499 CWC22Q9HCG8 908 aaKnown RBP16.95■□□□□ 0.3
LTBP4-228ENST00000600499 VAT1LQ9HCJ6 419 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 SLC5A4Q9NY91 659 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 MYH6P13533 1939 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 ABCB11O95342 1321 aa16.95■□□□□ 0.3
LTBP4-228ENST00000600499 GOLGA8AA7E2F4 631 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 GOLGA8BA8MQT2 603 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 CYP2B6P20813 491 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 METAP2P50579 478 aaKnown RBP eCLIP16.94■□□□□ 0.32e-7■■□□□ 12.5
LTBP4-228ENST00000600499 NTRK3Q16288 839 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 OLFML2BQ68BL8 750 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 ZNF467Q7Z7K2 595 aaPredicted RBP16.94■□□□□ 0.3
LTBP4-228ENST00000600499 CCDC144CPQ8IYA2 1237 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 TNS4Q8IZW8 715 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 SAMD3Q8N6K7 520 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 NPLOC4Q8TAT6 608 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 ZNF333Q96JL9 665 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 A1CFQ9NQ94 594 aaKnown RBP16.94■□□□□ 0.3
LTBP4-228ENST00000600499 PFASO15067 1338 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 CNTNAP5Q8WYK1 1306 aa16.94■□□□□ 0.3
LTBP4-228ENST00000600499 DHX16O60231 1041 aaKnown RBP16.93■□□□□ 0.3
LTBP4-228ENST00000600499 ADD1P35611 737 aaKnown RBP16.93■□□□□ 0.3
LTBP4-228ENST00000600499 NEK4P51957 841 aa16.93■□□□□ 0.3
LTBP4-228ENST00000600499 AK2P54819 239 aa16.93■□□□□ 0.3
LTBP4-228ENST00000600499 DPP9Q86TI2 863 aa16.93■□□□□ 0.3
LTBP4-228ENST00000600499 RAB11FIP4Q86YS3 637 aa16.93■□□□□ 0.3
LTBP4-228ENST00000600499 MSL3Q8N5Y2 521 aaKnown RBP16.93■□□□□ 0.3
LTBP4-228ENST00000600499 FAM133AQ8N9E0 248 aa16.93■□□□□ 0.3
LTBP4-228ENST00000600499 TRIB2Q92519 343 aa16.93■□□□□ 0.3
LTBP4-228ENST00000600499 RRP36Q96EU6 259 aaKnown RBP16.93■□□□□ 0.3
LTBP4-228ENST00000600499 MAP3K20Q9NYL2 800 aaKnown RBP16.93■□□□□ 0.3
LTBP4-228ENST00000600499 CYP39A1Q9NYL5 469 aa16.93■□□□□ 0.3
LTBP4-228ENST00000600499 MRPL11Q9Y3B7 192 aaKnown RBP16.93■□□□□ 0.3
LTBP4-228ENST00000600499 LOC102724159A0A0B4J2E5 919 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 NFIBO00712 420 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 OPLAHO14841 1288 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 HMGCRP04035 888 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 IFNAR1P17181 557 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 PWP2Q15269 919 aaKnown RBP16.92■□□□□ 0.3
LTBP4-228ENST00000600499 SLC9C1Q4G0N8 1177 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 MAP3K21Q5TCX8 1036 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 MAMDC4Q6UXC1 1216 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 ANKRD35Q8N283 1001 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 ABHD8Q96I13 439 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 MAML3Q96JK9 1138 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 FGD4Q96M96 766 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 HOMER2Q9NSB8 354 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 FLRT1Q9NZU1 646 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 TPCN1Q9ULQ1 816 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 PCDHA1Q9Y5I3 950 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 PLXNA1Q9UIW2 1896 aa16.92■□□□□ 0.3
LTBP4-228ENST00000600499 PFKFB2O60825 505 aa16.91■□□□□ 0.3
LTBP4-228ENST00000600499 PGK2P07205 417 aa16.91■□□□□ 0.3
LTBP4-228ENST00000600499 ELNP15502 786 aa16.91■□□□□ 0.3
LTBP4-228ENST00000600499 TAL1P17542 331 aaPredicted RBP16.91■□□□□ 0.3
LTBP4-228ENST00000600499 RABEP1Q15276 862 aa16.91■□□□□ 0.3
LTBP4-228ENST00000600499 MCF2L2Q86YR7 1114 aa16.91■□□□□ 0.3
LTBP4-228ENST00000600499 TEX2Q8IWB9 1127 aa16.91■□□□□ 0.3
LTBP4-228ENST00000600499 CMTR1Q8N1G2 835 aaKnown RBP16.91■□□□□ 0.3
LTBP4-228ENST00000600499 DDX11Q96FC9 970 aa16.91■□□□□ 0.3
LTBP4-228ENST00000600499 LCTP09848 1927 aa16.9■□□□□ 0.3
LTBP4-228ENST00000600499 hCG_1984214I3L0E3 225 aa16.9■□□□□ 0.3
LTBP4-228ENST00000600499 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
LTBP4-228ENST00000600499 CCL14Q16627 93 aa16.9■□□□□ 0.3
LTBP4-228ENST00000600499 USH1GQ495M9 461 aa16.9■□□□□ 0.3
LTBP4-228ENST00000600499 HOMER1Q86YM7 354 aa16.9■□□□□ 0.3
LTBP4-228ENST00000600499 ZNF713Q8N859 430 aaPredicted RBP16.9■□□□□ 0.3
LTBP4-228ENST00000600499 SH3TC2Q8TF17 1288 aa16.9■□□□□ 0.3
LTBP4-228ENST00000600499 RBM27Q9P2N5 1060 aaKnown RBP16.9■□□□□ 0.3
LTBP4-228ENST00000600499 SEC63Q9UGP8 760 aaKnown RBP16.9■□□□□ 0.3
LTBP4-228ENST00000600499 NRBP1Q9UHY1 535 aa16.9■□□□□ 0.3
LTBP4-228ENST00000600499 CENPFP49454 3210 aa16.89■□□□□ 0.29
LTBP4-228ENST00000600499 POTEB2H3BUK9 544 aa16.89■□□□□ 0.29
LTBP4-228ENST00000600499 PRPF3O43395 683 aaKnown RBP16.89■□□□□ 0.29
LTBP4-228ENST00000600499 INHAP05111 366 aa16.89■□□□□ 0.29
LTBP4-228ENST00000600499 HSD17B4P51659 736 aa16.89■□□□□ 0.29
LTBP4-228ENST00000600499 RPS6P62753 249 aaKnown RBP16.89■□□□□ 0.29
LTBP4-228ENST00000600499 UBXN2AP68543 259 aa16.89■□□□□ 0.29
LTBP4-228ENST00000600499 BAATQ14032 418 aaPredicted RBP16.89■□□□□ 0.29
LTBP4-228ENST00000600499 MORC4Q8TE76 937 aa16.89■□□□□ 0.29
LTBP4-228ENST00000600499 RNF26Q9BY78 433 aaPredicted RBP16.89■□□□□ 0.29
LTBP4-228ENST00000600499 SYNGAP1Q96PV0 1343 aa16.89■□□□□ 0.29
LTBP4-228ENST00000600499 RBBP6Q7Z6E9 1792 aaKnown RBP16.88■□□□□ 0.29
LTBP4-228ENST00000600499 SOWAHBA6NEL2 793 aa16.88■□□□□ 0.29
LTBP4-228ENST00000600499 CCT2P78371 535 aaKnown RBP16.88■□□□□ 0.29
LTBP4-228ENST00000600499 CNTN2Q02246 1040 aa16.88■□□□□ 0.29
LTBP4-228ENST00000600499 SCRN1Q12765 414 aa16.88■□□□□ 0.29
LTBP4-228ENST00000600499 ME3Q16798 604 aa16.88■□□□□ 0.29
LTBP4-228ENST00000600499 NSMFQ6X4W1 530 aa16.88■□□□□ 0.29
LTBP4-228ENST00000600499 RNF207Q6ZRF8 634 aa16.88■□□□□ 0.29
LTBP4-228ENST00000600499 CCDC82Q8N4S0 544 aa16.88■□□□□ 0.29
LTBP4-228ENST00000600499 DNERQ8NFT8 737 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms