RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 NKX3-2P78367 333 aa18.56■□□□□ 0.56
VRK3-221ENST00000600284 PWP2Q15269 919 aaKnown RBP18.56■□□□□ 0.56
VRK3-221ENST00000600284 KCNA10Q16322 511 aa18.56■□□□□ 0.56
VRK3-221ENST00000600284 PCSK9Q8NBP7 692 aaKnown RBP18.56■□□□□ 0.56
VRK3-221ENST00000600284 LENG1Q96BZ8 264 aaPredicted RBP18.56■□□□□ 0.56
VRK3-221ENST00000600284 LRCH3Q96II8 777 aa18.56■□□□□ 0.56
VRK3-221ENST00000600284 CNNM2Q9H8M5 875 aa18.56■□□□□ 0.56
VRK3-221ENST00000600284 SZT2Q5T011 3432 aa18.56■□□□□ 0.56
VRK3-221ENST00000600284 KDM4AO75164 1064 aa18.55■□□□□ 0.56
VRK3-221ENST00000600284 TLE2Q04725 743 aa18.55■□□□□ 0.56
VRK3-221ENST00000600284 NSMFQ6X4W1 530 aa18.55■□□□□ 0.56
VRK3-221ENST00000600284 MORC4Q8TE76 937 aa18.55■□□□□ 0.56
VRK3-221ENST00000600284 TOX2Q96NM4 488 aa18.55■□□□□ 0.56
VRK3-221ENST00000600284 KRT23Q9C075 422 aa18.55■□□□□ 0.56
VRK3-221ENST00000600284 STARD7Q9NQZ5 370 aa18.55■□□□□ 0.56
VRK3-221ENST00000600284 PDLIM7Q9NR12 457 aa18.55■□□□□ 0.56
VRK3-221ENST00000600284 ELP1O95163 1332 aa18.54■□□□□ 0.56
VRK3-221ENST00000600284 WDR19Q8NEZ3 1342 aa18.54■□□□□ 0.56
VRK3-221ENST00000600284 RAD50Q92878 1312 aa18.54■□□□□ 0.56
VRK3-221ENST00000600284 C6orf222P0C671 652 aaPredicted RBP18.54■□□□□ 0.56
VRK3-221ENST00000600284 GSPT1P15170 499 aaKnown RBP18.54■□□□□ 0.56
VRK3-221ENST00000600284 TNFAIP2Q03169 654 aa18.54■□□□□ 0.56
VRK3-221ENST00000600284 ANKRD33Q7Z3H0 272 aa18.54■□□□□ 0.56
VRK3-221ENST00000600284 RUFY2Q8WXA3 655 aa18.54■□□□□ 0.56
VRK3-221ENST00000600284 ZSCAN10Q96SZ4 725 aaPredicted RBP18.54■□□□□ 0.56
VRK3-221ENST00000600284 ZKSCAN3Q9BRR0 538 aa18.54■□□□□ 0.56
VRK3-221ENST00000600284 MAF1Q9H063 256 aa18.54■□□□□ 0.56
VRK3-221ENST00000600284 PRDM5Q9NQX1 630 aaPredicted RBP18.54■□□□□ 0.56
VRK3-221ENST00000600284 ADD3Q9UEY8 706 aaKnown RBP18.54■□□□□ 0.56
VRK3-221ENST00000600284 TRIM43BA6NCK2 446 aa18.53■□□□□ 0.56
VRK3-221ENST00000600284 ADCY6O43306 1168 aa18.53■□□□□ 0.56
VRK3-221ENST00000600284 CLTBP09497 229 aa18.53■□□□□ 0.56
VRK3-221ENST00000600284 IQSEC1Q6DN90 963 aa18.53■□□□□ 0.56
VRK3-221ENST00000600284 PNMA1Q8ND90 353 aa18.53■□□□□ 0.56
VRK3-221ENST00000600284 TRIM43Q96BQ3 446 aaPredicted RBP18.53■□□□□ 0.56
VRK3-221ENST00000600284 GLT1D1Q96MS3 346 aa18.53■□□□□ 0.56
VRK3-221ENST00000600284 KAT14Q9H8E8 782 aa18.53■□□□□ 0.56
VRK3-221ENST00000600284 ZSWIM5Q9P217 1185 aa18.53■□□□□ 0.56
VRK3-221ENST00000600284 Q9Y3F1 56 aa18.53■□□□□ 0.56
VRK3-221ENST00000600284 ASTN1O14525 1302 aa18.52■□□□□ 0.56
VRK3-221ENST00000600284 LAMA3Q16787 3333 aa18.52■□□□□ 0.56
VRK3-221ENST00000600284 MYADML2A6NDP7 307 aa18.52■□□□□ 0.56
VRK3-221ENST00000600284 DCDC2CA8MYV0 355 aa18.52■□□□□ 0.56
VRK3-221ENST00000600284 B4E1Z4 1266 aa18.52■□□□□ 0.56
VRK3-221ENST00000600284 KIAA0355O15063 1070 aa18.52■□□□□ 0.56
VRK3-221ENST00000600284 ASGR1P07306 291 aa18.52■□□□□ 0.56
VRK3-221ENST00000600284 BAATQ14032 418 aaPredicted RBP18.52■□□□□ 0.56
VRK3-221ENST00000600284 GNASQ5JWF2 1037 aa18.52■□□□□ 0.56
VRK3-221ENST00000600284 SH3RF1Q7Z6J0 888 aa18.52■□□□□ 0.56
VRK3-221ENST00000600284 VTA1Q9NP79 307 aa18.52■□□□□ 0.56
VRK3-221ENST00000600284 GNEQ9Y223 722 aaKnown RBP18.52■□□□□ 0.56
VRK3-221ENST00000600284 MROH7Q68CQ1 1323 aa18.51■□□□□ 0.55
VRK3-221ENST00000600284 LAMA4Q16363 1823 aa18.51■□□□□ 0.55
VRK3-221ENST00000600284 NFIBO00712 420 aa18.51■□□□□ 0.55
VRK3-221ENST00000600284 TAPT1Q6NXT6 567 aa18.51■□□□□ 0.55
VRK3-221ENST00000600284 ENAHQ8N8S7 591 aaPredicted RBP18.51■□□□□ 0.55
VRK3-221ENST00000600284 RGS22Q8NE09 1264 aa18.51■□□□□ 0.55
VRK3-221ENST00000600284 CLEC4DQ8WXI8 215 aa18.51■□□□□ 0.55
VRK3-221ENST00000600284 BADQ92934 168 aa18.51■□□□□ 0.55
VRK3-221ENST00000600284 IL25Q9H293 177 aa18.51■□□□□ 0.55
VRK3-221ENST00000600284 MCM3APO60318 1980 aa18.5■□□□□ 0.55
VRK3-221ENST00000600284 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.5■□□□□ 0.55
VRK3-221ENST00000600284 CTAGE5O15320 804 aa18.5■□□□□ 0.55
VRK3-221ENST00000600284 PQBP1O60828 265 aaKnown RBP18.5■□□□□ 0.55
VRK3-221ENST00000600284 CHMLP26374 656 aa18.5■□□□□ 0.55
VRK3-221ENST00000600284 CDK7P50613 346 aa18.5■□□□□ 0.55
VRK3-221ENST00000600284 ALDH5A1P51649 535 aaPredicted RBP18.5■□□□□ 0.55
VRK3-221ENST00000600284 IRX6P78412 446 aaPredicted RBP18.5■□□□□ 0.55
VRK3-221ENST00000600284 ASPRV1Q53RT3 343 aa18.5■□□□□ 0.55
VRK3-221ENST00000600284 RNF207Q6ZRF8 634 aa18.5■□□□□ 0.55
VRK3-221ENST00000600284 NOL8Q76FK4 1167 aaKnown RBP18.5■□□□□ 0.55
VRK3-221ENST00000600284 MPHOSPH6Q99547 160 aaKnown RBP18.5■□□□□ 0.55
VRK3-221ENST00000600284 UBAC1Q9BSL1 405 aa18.5■□□□□ 0.55
VRK3-221ENST00000600284 TNKSO95271 1327 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 A0A0U1RQG5 324 aaPredicted RBP18.49■□□□□ 0.55
VRK3-221ENST00000600284 PTPDC1A2A3K4 754 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 ZEB2O60315 1214 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 CABYRO75952 493 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 GOLGA8HP0CJ92 632 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 FAAP100Q0VG06 881 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 TLK2Q86UE8 772 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 DNERQ8NFT8 737 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 VTI1AQ96AJ9 217 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 SEZ6LQ9BYH1 1024 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 UBA5Q9GZZ9 404 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 AP5M1Q9H0R1 490 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 TMEM39AQ9NV64 488 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 U3KPZ7 1027 aaPredicted RBP18.49■□□□□ 0.55
VRK3-221ENST00000600284 LTBP2Q14767 1821 aa18.49■□□□□ 0.55
VRK3-221ENST00000600284 B4DLN1 442 aa18.48■□□□□ 0.55
VRK3-221ENST00000600284 ARVCFO00192 962 aa18.48■□□□□ 0.55
VRK3-221ENST00000600284 RAG1P15918 1043 aa18.48■□□□□ 0.55
VRK3-221ENST00000600284 SMPD1P17405 629 aa18.48■□□□□ 0.55
VRK3-221ENST00000600284 MRPL12P52815 198 aaKnown RBP18.48■□□□□ 0.55
VRK3-221ENST00000600284 RPS6P62753 249 aaKnown RBP18.48■□□□□ 0.55
VRK3-221ENST00000600284 IRX5P78411 483 aaPredicted RBP18.48■□□□□ 0.55
VRK3-221ENST00000600284 TRDNQ13061 729 aa18.48■□□□□ 0.55
VRK3-221ENST00000600284 FBXO16Q8IX29 292 aaPredicted RBP18.48■□□□□ 0.55
VRK3-221ENST00000600284 PURBQ96QR8 312 aaKnown RBP18.48■□□□□ 0.55
VRK3-221ENST00000600284 PDGFCQ9NRA1 345 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms