RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 FGD4Q96M96 766 aa15.96■□□□□ 0.15
VRK3-219ENST00000600137 RBM28Q9NW13 759 aaKnown RBP15.96■□□□□ 0.15
VRK3-219ENST00000600137 LCTP09848 1927 aa15.96■□□□□ 0.14
VRK3-219ENST00000600137 CNTNAP5Q8WYK1 1306 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 NFIBO00712 420 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 LARGE1O95461 756 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 PGK2P07205 417 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 METAP2P50579 478 aaKnown RBP eCLIP15.95■□□□□ 0.14
VRK3-219ENST00000600137 CCL14Q16627 93 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 ZNF792Q3KQV3 632 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 FBXO11Q86XK2 927 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 PXYLP1Q8TE99 480 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 SOCS4Q8WXH5 440 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 MMP19Q99542 508 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 ACAD9Q9H845 621 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 NCOA5Q9HCD5 579 aaKnown RBP15.95■□□□□ 0.14
VRK3-219ENST00000600137 A1CFQ9NQ94 594 aaKnown RBP15.95■□□□□ 0.14
VRK3-219ENST00000600137 HOMER2Q9NSB8 354 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 FLRT1Q9NZU1 646 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 FBXO40Q9UH90 709 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 PLXNA1Q9UIW2 1896 aa15.95■□□□□ 0.14
VRK3-219ENST00000600137 hCG_1642624A0A1W2PR95 340 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 DHX16O60231 1041 aaKnown RBP15.94■□□□□ 0.14
VRK3-219ENST00000600137 ADCY3O60266 1144 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 ELNP15502 786 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 CCT2P78371 535 aaKnown RBP15.94■□□□□ 0.14
VRK3-219ENST00000600137 ME3Q16798 604 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 USH1GQ495M9 461 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 HOMER1Q86YM7 354 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 FAM133AQ8N9E0 248 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 RGS22Q8NE09 1264 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 TRIB2Q92519 343 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 AMNQ9BXJ7 453 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 PNMA2Q9UL42 364 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 IVNS1ABPQ9Y6Y0 642 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 ASTN1O14525 1302 aa15.94■□□□□ 0.14
VRK3-219ENST00000600137 PFKFB2O60825 505 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 IFNAR1P17181 557 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 RGS2P41220 211 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 CNTN2Q02246 1040 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 GHRHRQ02643 423 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 ST3GAL1Q11201 340 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 SCRN1Q12765 414 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 TRIM32Q13049 653 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 PKN1Q16512 942 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 RAET1EQ8TD07 263 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 PIBF1Q8WXW3 757 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 ARMC5Q96C12 935 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 PURBQ96QR8 312 aaKnown RBP15.93■□□□□ 0.14
VRK3-219ENST00000600137 CYP39A1Q9NYL5 469 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 NAP1L2Q9ULW6 460 aaPredicted RBP15.93■□□□□ 0.14
VRK3-219ENST00000600137 DIS3Q9Y2L1 958 aaKnown RBP15.93■□□□□ 0.14
VRK3-219ENST00000600137 PCDHA1Q9Y5I3 950 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 V9GY48 417 aaPredicted RBP15.93■□□□□ 0.14
VRK3-219ENST00000600137 ABCB11O95342 1321 aa15.93■□□□□ 0.14
VRK3-219ENST00000600137 SOWAHBA6NEL2 793 aa15.92■□□□□ 0.14
VRK3-219ENST00000600137 CD2BP2O95400 341 aaKnown RBP15.92■□□□□ 0.14
VRK3-219ENST00000600137 GRK4P32298 578 aa15.92■□□□□ 0.14
VRK3-219ENST00000600137 BAATQ14032 418 aaPredicted RBP15.92■□□□□ 0.14
VRK3-219ENST00000600137 KCTD2Q14681 263 aa15.92■□□□□ 0.14
VRK3-219ENST00000600137 RABEP1Q15276 862 aa15.92■□□□□ 0.14
VRK3-219ENST00000600137 ANKRD1Q15327 319 aa15.92■□□□□ 0.14
VRK3-219ENST00000600137 TYW1BQ6NUM6 668 aa15.92■□□□□ 0.14
VRK3-219ENST00000600137 SH3TC2Q8TF17 1288 aa15.92■□□□□ 0.14
VRK3-219ENST00000600137 RRP36Q96EU6 259 aaKnown RBP15.92■□□□□ 0.14
VRK3-219ENST00000600137 MAML3Q96JK9 1138 aa15.92■□□□□ 0.14
VRK3-219ENST00000600137 APBA2Q99767 749 aa15.92■□□□□ 0.14
VRK3-219ENST00000600137 UPF2Q9HAU5 1272 aaKnown RBP15.92■□□□□ 0.14
VRK3-219ENST00000600137 CCDC196A0A1B0GTZ2 297 aa15.91■□□□□ 0.14
VRK3-219ENST00000600137 PRPF3O43395 683 aaKnown RBP15.91■□□□□ 0.14
VRK3-219ENST00000600137 CTDNEP1O95476 244 aa15.91■□□□□ 0.14
VRK3-219ENST00000600137 STK3Q13188 491 aa15.91■□□□□ 0.14
VRK3-219ENST00000600137 MAP3K21Q5TCX8 1036 aa15.91■□□□□ 0.14
VRK3-219ENST00000600137 DPP9Q86TI2 863 aa15.91■□□□□ 0.14
VRK3-219ENST00000600137 ANKRD35Q8N283 1001 aa15.91■□□□□ 0.14
VRK3-219ENST00000600137 SLAIN1Q8ND83 568 aa15.91■□□□□ 0.14
VRK3-219ENST00000600137 PHKBQ93100 1093 aa15.91■□□□□ 0.14
VRK3-219ENST00000600137 SHISA4Q96DD7 197 aa15.91■□□□□ 0.14
VRK3-219ENST00000600137 ZNF333Q96JL9 665 aa15.91■□□□□ 0.14
VRK3-219ENST00000600137 MAF1Q9H063 256 aa15.91■□□□□ 0.14
VRK3-219ENST00000600137 CWC22Q9HCG8 908 aaKnown RBP15.91■□□□□ 0.14
VRK3-219ENST00000600137 MRPL11Q9Y3B7 192 aaKnown RBP15.91■□□□□ 0.14
VRK3-219ENST00000600137 DTNBO60941 627 aa15.9■□□□□ 0.14
VRK3-219ENST00000600137 PPFIA3O75145 1194 aa15.9■□□□□ 0.14
VRK3-219ENST00000600137 RPS6P62753 249 aaKnown RBP15.9■□□□□ 0.14
VRK3-219ENST00000600137 OLFML2BQ68BL8 750 aa15.9■□□□□ 0.14
VRK3-219ENST00000600137 NSMFQ6X4W1 530 aa15.9■□□□□ 0.14
VRK3-219ENST00000600137 SLC30A10Q6XR72 485 aa15.9■□□□□ 0.14
VRK3-219ENST00000600137 TNS4Q8IZW8 715 aa15.9■□□□□ 0.14
VRK3-219ENST00000600137 NECAB1Q8N987 351 aa15.9■□□□□ 0.14
VRK3-219ENST00000600137 DDX11Q96FC9 970 aa15.9■□□□□ 0.14
VRK3-219ENST00000600137 ABHD8Q96I13 439 aa15.9■□□□□ 0.14
VRK3-219ENST00000600137 COL20A1Q9P218 1284 aa15.9■□□□□ 0.14
VRK3-219ENST00000600137 MCM3APO60318 1980 aa15.89■□□□□ 0.13
VRK3-219ENST00000600137 HSD17B4P51659 736 aa15.89■□□□□ 0.13
VRK3-219ENST00000600137 MTFR1Q15390 333 aa15.89■□□□□ 0.13
VRK3-219ENST00000600137 SLC9C1Q4G0N8 1177 aa15.89■□□□□ 0.13
VRK3-219ENST00000600137 WWC2Q6AWC2 1192 aa15.89■□□□□ 0.13
VRK3-219ENST00000600137 MAMDC4Q6UXC1 1216 aa15.89■□□□□ 0.13
VRK3-219ENST00000600137 NOL8Q76FK4 1167 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms