RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 CYTH3O43739 400 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 MYCP01106 439 aaPredicted RBP23.29■■□□□ 1.32
IRF3-221ENST00000598808 PGK2P07205 417 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 AK2P54819 239 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 CCT2P78371 535 aaKnown RBP23.29■■□□□ 1.32
IRF3-221ENST00000598808 ANKRD1Q15327 319 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 MUM1L1Q5H9M0 696 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 FBXL16Q8N461 479 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 SRBD1Q8N5C6 995 aaKnown RBP23.29■■□□□ 1.32
IRF3-221ENST00000598808 SH3TC2Q8TF17 1288 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 SPZ1Q9BXG8 430 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 AGXT2Q9BYV1 514 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 RIOX1Q9H6W3 641 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 SLC5A4Q9NY91 659 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 GJD2Q9UKL4 321 aa23.29■■□□□ 1.32
IRF3-221ENST00000598808 BAZ2BQ9UIF8 2168 aaKnown RBP23.28■■□□□ 1.32
IRF3-221ENST00000598808 CCDC196A0A1B0GTZ2 297 aa23.28■■□□□ 1.32
IRF3-221ENST00000598808 RCAN1P53805 252 aa23.28■■□□□ 1.32
IRF3-221ENST00000598808 SLC35G1Q2M3R5 365 aa23.28■■□□□ 1.32
IRF3-221ENST00000598808 AMNQ9BXJ7 453 aa23.28■■□□□ 1.32
IRF3-221ENST00000598808 hCG_1642624A0A1W2PR95 340 aa23.27■■□□□ 1.32
IRF3-221ENST00000598808 CDC27P30260 824 aa23.27■■□□□ 1.32
IRF3-221ENST00000598808 GRK4P32298 578 aa23.27■■□□□ 1.32
IRF3-221ENST00000598808 IRF5Q13568 498 aa23.27■■□□□ 1.32
IRF3-221ENST00000598808 SLAIN1Q8ND83 568 aa23.27■■□□□ 1.32
IRF3-221ENST00000598808 ABCB11O95342 1321 aa23.27■■□□□ 1.31
IRF3-221ENST00000598808 PTPDC1A2A3K4 754 aa23.26■■□□□ 1.31
IRF3-221ENST00000598808 PDIA3P30101 505 aaKnown RBP23.26■■□□□ 1.31
IRF3-221ENST00000598808 RABEP1Q15276 862 aa23.26■■□□□ 1.31
IRF3-221ENST00000598808 ABRAQ8N0Z2 381 aa23.26■■□□□ 1.31
IRF3-221ENST00000598808 IL17RAQ96F46 866 aa23.26■■□□□ 1.31
IRF3-221ENST00000598808 NCOA5Q9HCD5 579 aaKnown RBP23.26■■□□□ 1.31
IRF3-221ENST00000598808 ZNF236Q9UL36 1845 aa23.26■■□□□ 1.31
IRF3-221ENST00000598808 PNMA6FA0A0J9YX94 578 aa23.25■■□□□ 1.31
IRF3-221ENST00000598808 NFIBO00712 420 aa23.25■■□□□ 1.31
IRF3-221ENST00000598808 ADD1P35611 737 aaKnown RBP23.25■■□□□ 1.31
IRF3-221ENST00000598808 CCL14Q16627 93 aa23.25■■□□□ 1.31
IRF3-221ENST00000598808 A1CFQ9NQ94 594 aaKnown RBP23.25■■□□□ 1.31
IRF3-221ENST00000598808 PCDHA1Q9Y5I3 950 aa23.25■■□□□ 1.31
IRF3-221ENST00000598808 CNTNAP5Q8WYK1 1306 aa23.25■■□□□ 1.31
IRF3-221ENST00000598808 CPLX1O14810 134 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 COBLO75128 1261 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 HSCBQ8IWL3 235 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 NPLOC4Q8TAT6 608 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 MTMR8Q96EF0 704 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 SLKQ9H2G2 1235 aaPredicted RBP23.24■■□□□ 1.31
IRF3-221ENST00000598808 MRPL11Q9Y3B7 192 aaKnown RBP23.24■■□□□ 1.31
IRF3-221ENST00000598808 PFASO15067 1338 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 POTEB2H3BUK9 544 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 PPP1R11O60927 126 aaPredicted RBP23.24■■□□□ 1.31
IRF3-221ENST00000598808 PPFIA3O75145 1194 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 CALML3P27482 149 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 SMARCA1P28370 1054 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 TRAF1Q13077 416 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 PPP2R5BQ15173 497 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 HEATR3Q7Z4Q2 680 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 TRIB2Q92519 343 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 USP6NLQ92738 828 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 ZNF274Q96GC6 653 aaPredicted RBP23.24■■□□□ 1.31
IRF3-221ENST00000598808 KIF2CQ99661 725 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 TPCN1Q9ULQ1 816 aa23.24■■□□□ 1.31
IRF3-221ENST00000598808 SMCHD1A6NHR9 2005 aa23.23■■□□□ 1.31
IRF3-221ENST00000598808 INHAP05111 366 aa23.23■■□□□ 1.31
IRF3-221ENST00000598808 XRCC5P13010 732 aaKnown RBP23.23■■□□□ 1.31
IRF3-221ENST00000598808 UBXN2AP68543 259 aa23.23■■□□□ 1.31
IRF3-221ENST00000598808 AKAP17AQ02040 695 aaKnown RBP23.23■■□□□ 1.31
IRF3-221ENST00000598808 RNF207Q6ZRF8 634 aa23.23■■□□□ 1.31
IRF3-221ENST00000598808 TRMT44Q8IYL2 757 aaKnown RBP23.23■■□□□ 1.31
IRF3-221ENST00000598808 ALDH8A1Q9H2A2 487 aaPredicted RBP23.23■■□□□ 1.31
IRF3-221ENST00000598808 FAM217BQ9NTX9 383 aaPredicted RBP23.23■■□□□ 1.31
IRF3-221ENST00000598808 RBBP6Q7Z6E9 1792 aaKnown RBP23.22■■□□□ 1.31
IRF3-221ENST00000598808 ZNFX1Q9P2E3 1918 aaKnown RBP23.22■■□□□ 1.31
IRF3-221ENST00000598808 NID2Q14112 1375 aa23.22■■□□□ 1.31
IRF3-221ENST00000598808 HMGCRP04035 888 aa23.22■■□□□ 1.31
IRF3-221ENST00000598808 EVCP57679 992 aa23.22■■□□□ 1.31
IRF3-221ENST00000598808 CPLX2Q6PUV4 134 aaKnown RBP23.22■■□□□ 1.31
IRF3-221ENST00000598808 SLC30A10Q6XR72 485 aa23.22■■□□□ 1.31
IRF3-221ENST00000598808 PXYLP1Q8TE99 480 aa23.22■■□□□ 1.31
IRF3-221ENST00000598808 CLEC4DQ8WXI8 215 aa23.22■■□□□ 1.31
IRF3-221ENST00000598808 CYP39A1Q9NYL5 469 aa23.22■■□□□ 1.31
IRF3-221ENST00000598808 BRCA2P51587 3418 aa23.22■■□□□ 1.31
IRF3-221ENST00000598808 PLXNA1Q9UIW2 1896 aa23.21■■□□□ 1.31
IRF3-221ENST00000598808 BAATQ14032 418 aaPredicted RBP23.21■■□□□ 1.31
IRF3-221ENST00000598808 MFSD14CQ5VZR4 134 aa23.21■■□□□ 1.31
IRF3-221ENST00000598808 GPKOWQ92917 476 aaPredicted RBP eCLIP23.21■■□□□ 1.31
IRF3-221ENST00000598808 PHKBQ93100 1093 aa23.21■■□□□ 1.31
IRF3-221ENST00000598808 SLC26A6Q9BXS9 759 aa23.21■■□□□ 1.31
IRF3-221ENST00000598808 V9GY48 417 aaPredicted RBP23.21■■□□□ 1.31
IRF3-221ENST00000598808 ST18O60284 1047 aa23.2■■□□□ 1.3
IRF3-221ENST00000598808 CFBP00751 764 aa23.2■■□□□ 1.3
IRF3-221ENST00000598808 HOXC6P09630 235 aa23.2■■□□□ 1.3
IRF3-221ENST00000598808 CNTN2Q02246 1040 aa23.2■■□□□ 1.3
IRF3-221ENST00000598808 MCF2L2Q86YR7 1114 aa23.2■■□□□ 1.3
IRF3-221ENST00000598808 MAML3Q96JK9 1138 aa23.2■■□□□ 1.3
IRF3-221ENST00000598808 FLRT1Q9NZU1 646 aa23.2■■□□□ 1.3
IRF3-221ENST00000598808 TRIM32Q13049 653 aa23.19■■□□□ 1.3
IRF3-221ENST00000598808 ZNF792Q3KQV3 632 aa23.19■■□□□ 1.3
IRF3-221ENST00000598808 PRKAR2AP13861 404 aaKnown RBP23.18■■□□□ 1.3
IRF3-221ENST00000598808 CYP2C19P33261 490 aa23.18■■□□□ 1.3
IRF3-221ENST00000598808 RPS6P62753 249 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms