RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 MYADML2A6NDP7 307 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 NFIBO00712 420 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 ADAMTS4O75173 837 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 SNHG28P0DPA3 235 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 PTGS1P23219 599 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 CCDC144BQ3MJ40 725 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 ENAHQ8N8S7 591 aaPredicted RBP16.15■□□□□ 0.18
SCAF1-203ENST00000598359 ZSCAN10Q96SZ4 725 aaPredicted RBP16.15■□□□□ 0.18
SCAF1-203ENST00000598359 UBA5Q9GZZ9 404 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 KATNBL1Q9H079 304 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 CYP39A1Q9NYL5 469 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 CTNNA3Q9UI47 895 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 TAF6LQ9Y6J9 622 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 MCM3APO60318 1980 aa16.15■□□□□ 0.18
SCAF1-203ENST00000598359 BMP8BP34820 402 aa16.14■□□□□ 0.17
SCAF1-203ENST00000598359 RNF180Q86T96 592 aa16.14■□□□□ 0.17
SCAF1-203ENST00000598359 IQCA1Q86XH1 822 aa16.14■□□□□ 0.17
SCAF1-203ENST00000598359 DGKHQ86XP1 1220 aa16.14■□□□□ 0.17
SCAF1-203ENST00000598359 PNMA1Q8ND90 353 aa16.14■□□□□ 0.17
SCAF1-203ENST00000598359 KAT14Q9H8E8 782 aa16.14■□□□□ 0.17
SCAF1-203ENST00000598359 PHF24Q9UPV7 400 aa16.14■□□□□ 0.17
SCAF1-203ENST00000598359 TNKSO95271 1327 aa16.14■□□□□ 0.17
SCAF1-203ENST00000598359 LAMA2P24043 3122 aaKnown RBP16.13■□□□□ 0.17
SCAF1-203ENST00000598359 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.13■□□□□ 0.17
SCAF1-203ENST00000598359 A0A1W2PQ45 241 aaPredicted RBP16.13■□□□□ 0.17
SCAF1-203ENST00000598359 A0A1W2PQY0 241 aa16.13■□□□□ 0.17
SCAF1-203ENST00000598359 BAATQ14032 418 aaPredicted RBP16.13■□□□□ 0.17
SCAF1-203ENST00000598359 CYB5R4Q7L1T6 521 aa16.13■□□□□ 0.17
SCAF1-203ENST00000598359 UBE2OQ9C0C9 1292 aaKnown RBP16.13■□□□□ 0.17
SCAF1-203ENST00000598359 ABHD16BQ9H3Z7 469 aa16.13■□□□□ 0.17
SCAF1-203ENST00000598359 PRDM5Q9NQX1 630 aaPredicted RBP16.13■□□□□ 0.17
SCAF1-203ENST00000598359 MTMR10Q9NXD2 777 aa16.13■□□□□ 0.17
SCAF1-203ENST00000598359 RAD50Q92878 1312 aa16.13■□□□□ 0.17
SCAF1-203ENST00000598359 EYSQ5T1H1 3165 aa16.13■□□□□ 0.17
SCAF1-203ENST00000598359 LCTP09848 1927 aa16.12■□□□□ 0.17
SCAF1-203ENST00000598359 KCNA10Q16322 511 aa16.12■□□□□ 0.17
SCAF1-203ENST00000598359 TMEM63BQ5T3F8 832 aa16.12■□□□□ 0.17
SCAF1-203ENST00000598359 SLC30A10Q6XR72 485 aa16.12■□□□□ 0.17
SCAF1-203ENST00000598359 EEPD1Q7L9B9 569 aa16.12■□□□□ 0.17
SCAF1-203ENST00000598359 SH3RF1Q7Z6J0 888 aa16.12■□□□□ 0.17
SCAF1-203ENST00000598359 RUFY2Q8WXA3 655 aa16.12■□□□□ 0.17
SCAF1-203ENST00000598359 CLEC4DQ8WXI8 215 aa16.12■□□□□ 0.17
SCAF1-203ENST00000598359 KRT23Q9C075 422 aa16.12■□□□□ 0.17
SCAF1-203ENST00000598359 PDGFCQ9NRA1 345 aa16.12■□□□□ 0.17
SCAF1-203ENST00000598359 PTPDC1A2A3K4 754 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 SGSM2O43147 1006 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 DUSP11O75319 330 aaKnown RBP16.11■□□□□ 0.17
SCAF1-203ENST00000598359 CYP21A2P08686 494 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 C6orf222P0C671 652 aaPredicted RBP16.11■□□□□ 0.17
SCAF1-203ENST00000598359 ACLYP53396 1101 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 TLE2Q04725 743 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 SNX17Q15036 470 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 USH1GQ495M9 461 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCAF1-203ENST00000598359 FBXO16Q8IX29 292 aaPredicted RBP16.11■□□□□ 0.17
SCAF1-203ENST00000598359 KLHDC9Q8NEP7 349 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 ANKS1AQ92625 1134 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 UBAC1Q9BSL1 405 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 CNNM2Q9H8M5 875 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 LRRC37A2A6NM11 1700 aa16.11■□□□□ 0.17
SCAF1-203ENST00000598359 ASB14A6NK59 587 aa16.1■□□□□ 0.17
SCAF1-203ENST00000598359 CALML3P27482 149 aa16.1■□□□□ 0.17
SCAF1-203ENST00000598359 BEX3Q00994 111 aa16.1■□□□□ 0.17
SCAF1-203ENST00000598359 LRIT3Q3SXY7 679 aa16.1■□□□□ 0.17
SCAF1-203ENST00000598359 CCDC178Q5BJE1 867 aa16.1■□□□□ 0.17
SCAF1-203ENST00000598359 GPATCH4Q5T3I0 446 aaKnown RBP16.1■□□□□ 0.17
SCAF1-203ENST00000598359 CCSAPQ6IQ19 270 aaPredicted RBP16.1■□□□□ 0.17
SCAF1-203ENST00000598359 NOL8Q76FK4 1167 aaKnown RBP16.1■□□□□ 0.17
SCAF1-203ENST00000598359 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
SCAF1-203ENST00000598359 PDLIM7Q9NR12 457 aa16.1■□□□□ 0.17
SCAF1-203ENST00000598359 TSHZ2Q9NRE2 1034 aa16.1■□□□□ 0.17
SCAF1-203ENST00000598359 PRKAG2Q9UGJ0 569 aa16.1■□□□□ 0.17
SCAF1-203ENST00000598359 TRIM43BA6NCK2 446 aa16.09■□□□□ 0.17
SCAF1-203ENST00000598359 CTAGE5O15320 804 aa16.09■□□□□ 0.17
SCAF1-203ENST00000598359 PQBP1O60828 265 aaKnown RBP16.09■□□□□ 0.17
SCAF1-203ENST00000598359 TNFAIP2Q03169 654 aa16.09■□□□□ 0.17
SCAF1-203ENST00000598359 SEC23AQ15436 765 aa16.09■□□□□ 0.17
SCAF1-203ENST00000598359 CDC37Q16543 378 aaPredicted RBP16.09■□□□□ 0.17
SCAF1-203ENST00000598359 IFIT1BQ5T764 474 aaKnown RBP16.09■□□□□ 0.17
SCAF1-203ENST00000598359 STOX1Q6ZVD7 989 aa16.09■□□□□ 0.17
SCAF1-203ENST00000598359 CHST3Q7LGC8 479 aa16.09■□□□□ 0.17
SCAF1-203ENST00000598359 TDHQ8IZJ6 230 aa16.09■□□□□ 0.17
SCAF1-203ENST00000598359 STAG2Q8N3U4 1231 aa16.09■□□□□ 0.17
SCAF1-203ENST00000598359 TRIM43Q96BQ3 446 aaPredicted RBP16.09■□□□□ 0.17
SCAF1-203ENST00000598359 LBHD1Q9BQE6 289 aaPredicted RBP16.09■□□□□ 0.17
SCAF1-203ENST00000598359 TSEN34Q9BSV6 310 aaKnown RBP16.09■□□□□ 0.17
SCAF1-203ENST00000598359 UPF3AQ9H1J1 476 aaKnown RBP16.09■□□□□ 0.17
SCAF1-203ENST00000598359 SENP2Q9HC62 589 aa16.09■□□□□ 0.17
SCAF1-203ENST00000598359 VAT1LQ9HCJ6 419 aa16.09■□□□□ 0.17
SCAF1-203ENST00000598359 U3KPZ7 1027 aaPredicted RBP16.09■□□□□ 0.17
SCAF1-203ENST00000598359 PRUNE2Q8WUY3 3088 aa16.08■□□□□ 0.17
SCAF1-203ENST00000598359 SPTBN5Q9NRC6 3674 aaKnown RBP16.08■□□□□ 0.16
SCAF1-203ENST00000598359 DHX16O60231 1041 aaKnown RBP16.08■□□□□ 0.16
SCAF1-203ENST00000598359 ASGR1P07306 291 aa16.08■□□□□ 0.16
SCAF1-203ENST00000598359 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.16
SCAF1-203ENST00000598359 SMPD1P17405 629 aa16.08■□□□□ 0.16
SCAF1-203ENST00000598359 ALDH5A1P51649 535 aaPredicted RBP16.08■□□□□ 0.16
SCAF1-203ENST00000598359 GJA9P57773 515 aa16.08■□□□□ 0.16
SCAF1-203ENST00000598359 GNASQ5JWF2 1037 aa16.08■□□□□ 0.16
SCAF1-203ENST00000598359 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms