RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 TMEM106CQ9BVX2 250 aa21.06■□□□□ 0.96
IRF3-216ENST00000597180 UNC93B1Q9H1C4 597 aa21.06■□□□□ 0.96
IRF3-216ENST00000597180 VAT1LQ9HCJ6 419 aa21.06■□□□□ 0.96
IRF3-216ENST00000597180 BRPF3Q9ULD4 1205 aa21.06■□□□□ 0.96
IRF3-216ENST00000597180 PFASO15067 1338 aa21.05■□□□□ 0.96
IRF3-216ENST00000597180 RPTORQ8N122 1335 aa21.05■□□□□ 0.96
IRF3-216ENST00000597180 MYCP01106 439 aaPredicted RBP21.05■□□□□ 0.96
IRF3-216ENST00000597180 PRKAR2AP13861 404 aaKnown RBP21.05■□□□□ 0.96
IRF3-216ENST00000597180 GNAQP50148 359 aa21.05■□□□□ 0.96
IRF3-216ENST00000597180 RCAN1P53805 252 aa21.05■□□□□ 0.96
IRF3-216ENST00000597180 SOX10P56693 466 aa21.05■□□□□ 0.96
IRF3-216ENST00000597180 MFSD14CQ5VZR4 134 aa21.05■□□□□ 0.96
IRF3-216ENST00000597180 SYNE3Q6ZMZ3 975 aa21.05■□□□□ 0.96
IRF3-216ENST00000597180 CLEC4DQ8WXI8 215 aa21.05■□□□□ 0.96
IRF3-216ENST00000597180 SPZ1Q9BXG8 430 aa21.05■□□□□ 0.96
IRF3-216ENST00000597180 PAK6Q9NQU5 681 aaPredicted RBP21.05■□□□□ 0.96
IRF3-216ENST00000597180 POTEFA5A3E0 1075 aa21.04■□□□□ 0.96
IRF3-216ENST00000597180 ZBTB5O15062 677 aa21.04■□□□□ 0.96
IRF3-216ENST00000597180 RXRAP19793 462 aa21.04■□□□□ 0.96
IRF3-216ENST00000597180 FGD1P98174 961 aa21.04■□□□□ 0.96
IRF3-216ENST00000597180 CACNB2Q08289 660 aaPredicted RBP21.04■□□□□ 0.96
IRF3-216ENST00000597180 ZNF467Q7Z7K2 595 aaPredicted RBP21.04■□□□□ 0.96
IRF3-216ENST00000597180 MICU3Q86XE3 530 aa21.04■□□□□ 0.96
IRF3-216ENST00000597180 FBXO11Q86XK2 927 aa21.04■□□□□ 0.96
IRF3-216ENST00000597180 FAM133AQ8N9E0 248 aa21.04■□□□□ 0.96
IRF3-216ENST00000597180 FANCBQ8NB91 859 aa21.04■□□□□ 0.96
IRF3-216ENST00000597180 RNF208Q9H0X6 261 aa21.04■□□□□ 0.96
IRF3-216ENST00000597180 HMX1Q9NP08 348 aaPredicted RBP21.04■□□□□ 0.96
IRF3-216ENST00000597180 CYP46A1Q9Y6A2 500 aa21.04■□□□□ 0.96
IRF3-216ENST00000597180 ABCB11O95342 1321 aa21.04■□□□□ 0.96
IRF3-216ENST00000597180 KLF18A0A0U1RQI7 1052 aa21.03■□□□□ 0.96
IRF3-216ENST00000597180 NFIBO00712 420 aa21.03■□□□□ 0.96
IRF3-216ENST00000597180 ZBTB43O43298 467 aa21.03■□□□□ 0.96
IRF3-216ENST00000597180 GJB1P08034 283 aa21.03■□□□□ 0.96
IRF3-216ENST00000597180 USH1GQ495M9 461 aa21.03■□□□□ 0.96
IRF3-216ENST00000597180 RAB11FIP4Q86YS3 637 aa21.03■□□□□ 0.96
IRF3-216ENST00000597180 MSL3Q8N5Y2 521 aaKnown RBP21.03■□□□□ 0.96
IRF3-216ENST00000597180 FGD4Q96M96 766 aa21.03■□□□□ 0.96
IRF3-216ENST00000597180 AMNQ9BXJ7 453 aa21.03■□□□□ 0.96
IRF3-216ENST00000597180 MAF1Q9H063 256 aa21.03■□□□□ 0.96
IRF3-216ENST00000597180 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.03■□□□□ 0.963e-11■■■□□ 15.6
IRF3-216ENST00000597180 CYP39A1Q9NYL5 469 aa21.03■□□□□ 0.96
IRF3-216ENST00000597180 NID2Q14112 1375 aa21.02■□□□□ 0.96
IRF3-216ENST00000597180 LRRC37A2A6NM11 1700 aa21.02■□□□□ 0.96
IRF3-216ENST00000597180 PPP1R11O60927 126 aaPredicted RBP21.02■□□□□ 0.96
IRF3-216ENST00000597180 PLEKHA8P1O95397 391 aa21.02■□□□□ 0.96
IRF3-216ENST00000597180 CYP2C19P33261 490 aa21.02■□□□□ 0.96
IRF3-216ENST00000597180 MAMDC4Q6UXC1 1216 aa21.02■□□□□ 0.96
IRF3-216ENST00000597180 NSMFQ6X4W1 530 aa21.02■□□□□ 0.96
IRF3-216ENST00000597180 TMTC3Q6ZXV5 915 aa21.02■□□□□ 0.96
IRF3-216ENST00000597180 CCDC144CPQ8IYA2 1237 aa21.02■□□□□ 0.96
IRF3-216ENST00000597180 SRBD1Q8N5C6 995 aaKnown RBP21.02■□□□□ 0.96
IRF3-216ENST00000597180 BRF1Q92994 677 aa21.02■□□□□ 0.96
IRF3-216ENST00000597180 PIGSQ96S52 555 aa21.02■□□□□ 0.96
IRF3-216ENST00000597180 TINF2Q9BSI4 451 aa21.02■□□□□ 0.96
IRF3-216ENST00000597180 RBM28Q9NW13 759 aaKnown RBP21.02■□□□□ 0.96
IRF3-216ENST00000597180 PNMA6FA0A0J9YX94 578 aa21.01■□□□□ 0.95
IRF3-216ENST00000597180 POTEB2H3BUK9 544 aa21.01■□□□□ 0.95
IRF3-216ENST00000597180 CYBAP13498 195 aa21.01■□□□□ 0.95
IRF3-216ENST00000597180 EVCP57679 992 aa21.01■□□□□ 0.95
IRF3-216ENST00000597180 APOBRQ0VD83 1088 aa21.01■□□□□ 0.95
IRF3-216ENST00000597180 HOMER1Q86YM7 354 aa21.01■□□□□ 0.95
IRF3-216ENST00000597180 RGS22Q8NE09 1264 aa21.01■□□□□ 0.95
IRF3-216ENST00000597180 UPF3BQ9BZI7 483 aaKnown RBP21.01■□□□□ 0.95
IRF3-216ENST00000597180 MRPL11Q9Y3B7 192 aaKnown RBP21.01■□□□□ 0.95
IRF3-216ENST00000597180 SYNGAP1Q96PV0 1343 aa21.01■□□□□ 0.95
IRF3-216ENST00000597180 CCND3P30281 292 aaPredicted RBP21■□□□□ 0.95
IRF3-216ENST00000597180 GJA8P48165 433 aa21■□□□□ 0.95
IRF3-216ENST00000597180 RGS19P49795 217 aa21■□□□□ 0.95
IRF3-216ENST00000597180 CNTN2Q02246 1040 aa21■□□□□ 0.95
IRF3-216ENST00000597180 TRAF1Q13077 416 aa21■□□□□ 0.95
IRF3-216ENST00000597180 TOB2Q14106 344 aaPredicted RBP21■□□□□ 0.95
IRF3-216ENST00000597180 RTN1Q16799 776 aa21■□□□□ 0.95
IRF3-216ENST00000597180 NRBP1Q9UHY1 535 aa21■□□□□ 0.95
IRF3-216ENST00000597180 BRCA2P51587 3418 aa21■□□□□ 0.95
IRF3-216ENST00000597180 SOWAHBA6NEL2 793 aa20.99■□□□□ 0.95
IRF3-216ENST00000597180 GOLGA8AA7E2F4 631 aa20.99■□□□□ 0.95
IRF3-216ENST00000597180 GOLGA8BA8MQT2 603 aa20.99■□□□□ 0.95
IRF3-216ENST00000597180 CAPN2P17655 700 aa20.99■□□□□ 0.95
IRF3-216ENST00000597180 BAATQ14032 418 aaPredicted RBP20.99■□□□□ 0.95
IRF3-216ENST00000597180 PPP2R5BQ15173 497 aa20.99■□□□□ 0.95
IRF3-216ENST00000597180 RNF207Q6ZRF8 634 aa20.99■□□□□ 0.95
IRF3-216ENST00000597180 TRPV1Q8NER1 839 aa20.99■□□□□ 0.95
IRF3-216ENST00000597180 U2AF1L4Q8WU68 220 aaKnown RBP20.99■□□□□ 0.95
IRF3-216ENST00000597180 RRP36Q96EU6 259 aaKnown RBP20.99■□□□□ 0.95
IRF3-216ENST00000597180 FAM217BQ9NTX9 383 aaPredicted RBP20.99■□□□□ 0.95
IRF3-216ENST00000597180 PTPDC1A2A3K4 754 aa20.98■□□□□ 0.95
IRF3-216ENST00000597180 SGPL1O95470 568 aa20.98■□□□□ 0.95
IRF3-216ENST00000597180 EN2P19622 333 aaPredicted RBP20.98■□□□□ 0.95
IRF3-216ENST00000597180 RPS6P62753 249 aaKnown RBP20.98■□□□□ 0.95
IRF3-216ENST00000597180 GHRHRQ02643 423 aa20.98■□□□□ 0.95
IRF3-216ENST00000597180 SLC30A10Q6XR72 485 aa20.98■□□□□ 0.95
IRF3-216ENST00000597180 MCF2L2Q86YR7 1114 aa20.98■□□□□ 0.95
IRF3-216ENST00000597180 CMTR1Q8N1G2 835 aaKnown RBP20.98■□□□□ 0.95
IRF3-216ENST00000597180 SHISA4Q96DD7 197 aa20.98■□□□□ 0.95
IRF3-216ENST00000597180 DEFB118Q96PH6 123 aa20.98■□□□□ 0.95
IRF3-216ENST00000597180 CRISPLD2Q9H0B8 497 aa20.98■□□□□ 0.95
IRF3-216ENST00000597180 PCDHA1Q9Y5I3 950 aa20.98■□□□□ 0.95
IRF3-216ENST00000597180 ASTN1O14525 1302 aa20.98■□□□□ 0.95
IRF3-216ENST00000597180 CNTNAP5Q8WYK1 1306 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms