RNA–Protein interactions for RNA: ENST00000596403.1

SIPA1L3-207, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 3

Gene SIPA1L3, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-207ENST00000596403 COL11A1P12107 1806 aaPredicted RBP17.33■□□□□ 0.37
SIPA1L3-207ENST00000596403 DYNC1LI2O43237 492 aaPredicted RBP17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 ADCY6O43306 1168 aa17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 CHGBP05060 677 aa17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 CNTN2Q02246 1040 aa17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 BRDTQ58F21 947 aaPredicted RBP17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 OTOP2Q7RTS6 562 aa17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 IFNL3Q8IZI9 196 aa17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 FGD4Q96M96 766 aa17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 UHRF1Q96T88 793 aaPredicted RBP17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 MPHOSPH6Q99547 160 aaKnown RBP17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 KATNBL1Q9H079 304 aa17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 NAPBQ9H115 298 aa17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 NKX2-4Q9H2Z4 354 aa17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 VTA1Q9NP79 307 aa17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 ADD3Q9UEY8 706 aaKnown RBP17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 GNEQ9Y223 722 aaKnown RBP17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 PCDHA11Q9Y5I1 949 aa17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 LAMA2P24043 3122 aaKnown RBP17.33■□□□□ 0.36
SIPA1L3-207ENST00000596403 PLIN4Q96Q06 1357 aa17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 LOC102724159A0A0B4J2E5 919 aa17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 ERC2O15083 957 aa17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 ACTN1P12814 892 aa17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 ALAS1P13196 640 aa17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 TFAP4Q01664 338 aa17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 PWP2Q15269 919 aaKnown RBP17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 CCDC85BQ15834 202 aaPredicted RBP17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 PPP2R2DQ66LE6 453 aa17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 NOC4LQ9BVI4 516 aaKnown RBP17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 GPHNQ9NQX3 736 aaPredicted RBP17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 POLR3EQ9NVU0 708 aa17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 PNMA2Q9UL42 364 aa17.32■□□□□ 0.36
SIPA1L3-207ENST00000596403 ZBBXA8MT70 800 aa17.31■□□□□ 0.36
SIPA1L3-207ENST00000596403 CTAGE5O15320 804 aa17.31■□□□□ 0.36
SIPA1L3-207ENST00000596403 GTPBP6O43824 516 aaPredicted RBP17.31■□□□□ 0.36
SIPA1L3-207ENST00000596403 CCL23P55773 120 aa17.31■□□□□ 0.36
SIPA1L3-207ENST00000596403 IRX5P78411 483 aaPredicted RBP17.31■□□□□ 0.36
SIPA1L3-207ENST00000596403 RCSD1Q6JBY9 416 aa17.31■□□□□ 0.36
SIPA1L3-207ENST00000596403 EPB41L4AQ9HCS5 686 aaPredicted RBP17.31■□□□□ 0.36
SIPA1L3-207ENST00000596403 STX8Q9UNK0 236 aa17.31■□□□□ 0.36
SIPA1L3-207ENST00000596403 RAD50Q92878 1312 aa17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 SOWAHBA6NEL2 793 aa17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 TSPY2A6NKD2 308 aa17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 SMARCA5O60264 1052 aaPredicted RBP17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 ATP2A2P16615 1042 aaKnown RBP17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 SMPD1P17405 629 aa17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 MCCP23508 829 aa17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 CPT1AP50416 773 aa17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 AGBL1Q96MI9 1066 aa17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 C1QTNF1Q9BXJ1 281 aa17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 CXXC1Q9P0U4 656 aaPredicted RBP17.3■□□□□ 0.36
SIPA1L3-207ENST00000596403 B4DLN1 442 aa17.29■□□□□ 0.36
SIPA1L3-207ENST00000596403 B4GALT4O60513 344 aa17.29■□□□□ 0.36
SIPA1L3-207ENST00000596403 MRPL12P52815 198 aaKnown RBP17.29■□□□□ 0.36
SIPA1L3-207ENST00000596403 PPARAQ07869 468 aa17.29■□□□□ 0.36
SIPA1L3-207ENST00000596403 ADGRE1Q14246 886 aa17.29■□□□□ 0.36
SIPA1L3-207ENST00000596403 NSMFQ6X4W1 530 aa17.29■□□□□ 0.36
SIPA1L3-207ENST00000596403 CYP39A1Q9NYL5 469 aa17.29■□□□□ 0.36
SIPA1L3-207ENST00000596403 CCPG1Q9ULG6 757 aa17.29■□□□□ 0.36
SIPA1L3-207ENST00000596403 ASTN1O14525 1302 aa17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 KIF28PB7ZC32 967 aa17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 KPNA6O60684 536 aa17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 RFC2P35250 354 aa17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 SKIV2LQ15477 1246 aaKnown RBP17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 DUSP28Q4G0W2 176 aa17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 TMEM67Q5HYA8 995 aa17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 EEPD1Q7L9B9 569 aa17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 FBXO16Q8IX29 292 aaPredicted RBP17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 RETREG2Q8NC44 543 aa17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 TRPV6Q9H1D0 765 aa17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 ALDH8A1Q9H2A2 487 aaPredicted RBP17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 VCANP13611 3396 aa17.28■□□□□ 0.36
SIPA1L3-207ENST00000596403 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 ZNF536O15090 1300 aa17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 TTC41PQ6P2S7 1318 aa17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 M0R2C6 588 aa17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 ICAM1P05362 532 aa17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 TAPT1Q6NXT6 567 aa17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 MICALL1Q8N3F8 863 aa17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 DCAF4Q8WV16 495 aa17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 FSD1Q9BTV5 496 aa17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 RCAN3Q9UKA8 241 aa17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 PRR12Q9ULL5 1215 aa17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 YBX2Q9Y2T7 364 aaKnown RBP17.27■□□□□ 0.36
SIPA1L3-207ENST00000596403 NKRFO15226 690 aaKnown RBP eCLIP17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 CCDC96Q2M329 555 aa17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 KCTD1Q719H9 257 aa17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 PHOSPHO2Q8TCD6 241 aa17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 MORC4Q8TE76 937 aa17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 SLC9A7Q96T83 725 aa17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 MTG1Q9BT17 334 aaPredicted RBP17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 WDR11Q9BZH6 1224 aa17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 WNT8AQ9H1J5 351 aa17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 DCTPP1Q9H773 170 aa17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 COG5Q9UP83 839 aa17.26■□□□□ 0.35
SIPA1L3-207ENST00000596403 GRIN2DO15399 1336 aa17.25■□□□□ 0.35
SIPA1L3-207ENST00000596403 TNKSO95271 1327 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms