RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 XRCC6P12956 609 aaKnown RBP eCLIP22.73■■□□□ 1.23
LSM4-203ENST00000593829 DDIT3P35638 169 aa22.73■■□□□ 1.23
LSM4-203ENST00000593829 QRICH1Q2TAL8 776 aa22.73■■□□□ 1.23
LSM4-203ENST00000593829 MTMR8Q96EF0 704 aa22.73■■□□□ 1.23
LSM4-203ENST00000593829 ZNF333Q96JL9 665 aa22.73■■□□□ 1.23
LSM4-203ENST00000593829 DDX11L8A8MPP1 907 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 HMGCRP04035 888 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 TAL1P17542 331 aaPredicted RBP22.72■■□□□ 1.23
LSM4-203ENST00000593829 SMARCA1P28370 1054 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 RCAN1P53805 252 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 UBXN2AP68543 259 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 APOBRQ0VD83 1088 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 SLC35G1Q2M3R5 365 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 NPLOC4Q8TAT6 608 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 TRIB2Q92519 343 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 RRAGDQ9NQL2 400 aaPredicted RBP22.72■■□□□ 1.23
LSM4-203ENST00000593829 NAP1L2Q9ULW6 460 aaPredicted RBP22.72■■□□□ 1.23
LSM4-203ENST00000593829 CCDC85CA6NKD9 419 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 ZBTB5O15062 677 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 CYTH3O43739 400 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 PGK2P07205 417 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 CCL14Q16627 93 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 MUM1L1Q5H9M0 696 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 SPZ1Q9BXG8 430 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 PDRG1Q9NUG6 133 aa22.72■■□□□ 1.23
LSM4-203ENST00000593829 RBM28Q9NW13 759 aaKnown RBP22.72■■□□□ 1.23
LSM4-203ENST00000593829 INHAP05111 366 aa22.71■■□□□ 1.23
LSM4-203ENST00000593829 USH1GQ495M9 461 aa22.71■■□□□ 1.23
LSM4-203ENST00000593829 FBXO11Q86XK2 927 aa22.71■■□□□ 1.23
LSM4-203ENST00000593829 PLEKHA8P1O95397 391 aa22.7■■□□□ 1.23
LSM4-203ENST00000593829 RTN1Q16799 776 aa22.7■■□□□ 1.23
LSM4-203ENST00000593829 HOMER1Q86YM7 354 aa22.7■■□□□ 1.23
LSM4-203ENST00000593829 HSCBQ8IWL3 235 aa22.7■■□□□ 1.23
LSM4-203ENST00000593829 SRBD1Q8N5C6 995 aaKnown RBP22.7■■□□□ 1.23
LSM4-203ENST00000593829 PIGSQ96S52 555 aa22.7■■□□□ 1.23
LSM4-203ENST00000593829 AMNQ9BXJ7 453 aa22.7■■□□□ 1.23
LSM4-203ENST00000593829 CIZ1Q9ULV3 898 aaPredicted RBP22.7■■□□□ 1.23
LSM4-203ENST00000593829 DIS3Q9Y2L1 958 aaKnown RBP22.7■■□□□ 1.23
LSM4-203ENST00000593829 GOLGA8AA7E2F4 631 aa22.7■■□□□ 1.22
LSM4-203ENST00000593829 GOLGA8BA8MQT2 603 aa22.7■■□□□ 1.22
LSM4-203ENST00000593829 TRAK2O60296 914 aa22.7■■□□□ 1.22
LSM4-203ENST00000593829 MRE11P49959 708 aa22.7■■□□□ 1.22
LSM4-203ENST00000593829 TOB2Q14106 344 aaPredicted RBP22.7■■□□□ 1.22
LSM4-203ENST00000593829 ZNF792Q3KQV3 632 aa22.7■■□□□ 1.22
LSM4-203ENST00000593829 TMTC3Q6ZXV5 915 aa22.7■■□□□ 1.22
LSM4-203ENST00000593829 UBE2Q2Q8WVN8 375 aa22.7■■□□□ 1.22
LSM4-203ENST00000593829 A1CFQ9NQ94 594 aaKnown RBP22.7■■□□□ 1.22
LSM4-203ENST00000593829 PFASO15067 1338 aa22.7■■□□□ 1.22
LSM4-203ENST00000593829 ABCB11O95342 1321 aa22.7■■□□□ 1.22
LSM4-203ENST00000593829 CENPFP49454 3210 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 DNAJC25-GNG10A0A024R161 153 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 EVCP57679 992 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 PPP2R5BQ15173 497 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 OLFML2BQ68BL8 750 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 MAML3Q96JK9 1138 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 FLRT1Q9NZU1 646 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 PNMA6FA0A0J9YX94 578 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 MYCP01106 439 aaPredicted RBP22.69■■□□□ 1.22
LSM4-203ENST00000593829 METAP2P50579 478 aaKnown RBP eCLIP22.69■■□□□ 1.223e-7■■■■■ 36.2
LSM4-203ENST00000593829 TRAF1Q13077 416 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 MFSD14CQ5VZR4 134 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 NSMFQ6X4W1 530 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 CMTR1Q8N1G2 835 aaKnown RBP22.69■■□□□ 1.22
LSM4-203ENST00000593829 CLEC4DQ8WXI8 215 aa22.69■■□□□ 1.22
LSM4-203ENST00000593829 RRP36Q96EU6 259 aaKnown RBP22.69■■□□□ 1.22
LSM4-203ENST00000593829 ZNFX1Q9P2E3 1918 aaKnown RBP22.68■■□□□ 1.22
LSM4-203ENST00000593829 NFIBO00712 420 aa22.68■■□□□ 1.22
LSM4-203ENST00000593829 CYP39A1Q9NYL5 469 aa22.68■■□□□ 1.22
LSM4-203ENST00000593829 MRPL11Q9Y3B7 192 aaKnown RBP22.68■■□□□ 1.22
LSM4-203ENST00000593829 CCDC196A0A1B0GTZ2 297 aa22.67■■□□□ 1.22
LSM4-203ENST00000593829 POTEB2H3BUK9 544 aa22.67■■□□□ 1.22
LSM4-203ENST00000593829 PPP1R11O60927 126 aaPredicted RBP22.67■■□□□ 1.22
LSM4-203ENST00000593829 TRIM32Q13049 653 aa22.67■■□□□ 1.22
LSM4-203ENST00000593829 MTFR1Q15390 333 aa22.67■■□□□ 1.22
LSM4-203ENST00000593829 PIBF1Q8WXW3 757 aa22.67■■□□□ 1.22
LSM4-203ENST00000593829 ALDH8A1Q9H2A2 487 aaPredicted RBP22.67■■□□□ 1.22
LSM4-203ENST00000593829 PCDHA1Q9Y5I3 950 aa22.67■■□□□ 1.22
LSM4-203ENST00000593829 CCDC82Q8N4S0 544 aa22.67■■□□□ 1.22
LSM4-203ENST00000593829 SEC63Q9UGP8 760 aaKnown RBP22.67■■□□□ 1.22
LSM4-203ENST00000593829 SMCHD1A6NHR9 2005 aa22.66■■□□□ 1.22
LSM4-203ENST00000593829 IGHA2P01877 340 aa22.66■■□□□ 1.22
LSM4-203ENST00000593829 CCL5P13501 91 aa22.66■■□□□ 1.22
LSM4-203ENST00000593829 PRKAR2AP13861 404 aaKnown RBP22.66■■□□□ 1.22
LSM4-203ENST00000593829 PTMSP20962 102 aa22.66■■□□□ 1.22
LSM4-203ENST00000593829 CLCN1P35523 988 aa22.66■■□□□ 1.22
LSM4-203ENST00000593829 MAP3K21Q5TCX8 1036 aa22.66■■□□□ 1.22
LSM4-203ENST00000593829 RGS22Q8NE09 1264 aa22.66■■□□□ 1.22
LSM4-203ENST00000593829 TMEM106CQ9BVX2 250 aa22.66■■□□□ 1.22
LSM4-203ENST00000593829 FAM217BQ9NTX9 383 aaPredicted RBP22.66■■□□□ 1.22
LSM4-203ENST00000593829 PTPDC1A2A3K4 754 aa22.65■■□□□ 1.22
LSM4-203ENST00000593829 PDIA3P30101 505 aaKnown RBP22.65■■□□□ 1.22
LSM4-203ENST00000593829 CDC27P30260 824 aa22.65■■□□□ 1.22
LSM4-203ENST00000593829 CACNB2Q08289 660 aaPredicted RBP22.65■■□□□ 1.22
LSM4-203ENST00000593829 BAATQ14032 418 aaPredicted RBP22.65■■□□□ 1.22
LSM4-203ENST00000593829 RNF207Q6ZRF8 634 aa22.65■■□□□ 1.22
LSM4-203ENST00000593829 FAM133AQ8N9E0 248 aa22.65■■□□□ 1.22
LSM4-203ENST00000593829 MAF1Q9H063 256 aa22.65■■□□□ 1.22
LSM4-203ENST00000593829 RNF208Q9H0X6 261 aa22.65■■□□□ 1.22
LSM4-203ENST00000593829 NID2Q14112 1375 aa22.65■■□□□ 1.22
LSM4-203ENST00000593829 CYP2C19P33261 490 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms