RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 DDAH1O94760 285 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 CALM1P0DP23 149 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 CALM2P0DP24 149 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 CALM3P0DP25 149 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 SNHG28P0DPA3 235 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 CYP2B6P20813 491 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 STAT2P52630 851 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 HERVK_113P62684 666 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 ZNF543Q08ER8 600 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 TROAPQ12815 778 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 GRIN2CQ14957 1233 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 FAM110CQ1W6H9 321 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 ASPRV1Q53RT3 343 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 GPATCH4Q5T3I0 446 aaKnown RBP13.79□□□□□ -0.2
DDX39A-219ENST00000592927 LHX8Q68G74 356 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 RASGRP2Q7LDG7 609 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 FAM160B2Q86V87 743 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 GTF3C2Q8WUA4 911 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-219ENST00000592927 PPM1EQ8WY54 764 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 SLF1Q9BQI6 1058 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 C1QTNF1Q9BXJ1 281 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 SENP6Q9GZR1 1112 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-219ENST00000592927 FBXO28Q9NVF7 368 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 NAP1L2Q9ULW6 460 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-219ENST00000592927 ARIH1Q9Y4X5 557 aaPredicted RBP13.79□□□□□ -0.2
DDX39A-219ENST00000592927 MYH4Q9Y623 1939 aa13.79□□□□□ -0.2
DDX39A-219ENST00000592927 KLF18A0A0U1RQI7 1052 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 PLA2G6O60733 806 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 LARGE1O95461 756 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 GOLGA8HP0CJ92 632 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 PDIA4P13667 645 aaKnown RBP13.78□□□□□ -0.2
DDX39A-219ENST00000592927 DSG3P32926 999 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 KIF5BP33176 963 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 GCLCP48506 637 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-219ENST00000592927 APOBRQ0VD83 1088 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 GRM4Q14833 912 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 CCDC83Q8IWF9 413 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 PRPF38AQ8NAV1 312 aaKnown RBP13.78□□□□□ -0.2
DDX39A-219ENST00000592927 CTCFLQ8NI51 663 aaPredicted RBP13.78□□□□□ -0.2
DDX39A-219ENST00000592927 GTF3C6Q969F1 213 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 KIFC2Q96AC6 838 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 SNX27Q96L92 541 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 MAP3K14Q99558 947 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 LLPHQ9BRT6 129 aaKnown RBP13.78□□□□□ -0.2
DDX39A-219ENST00000592927 MYL10Q9BUA6 226 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 BRPF3Q9ULD4 1205 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 PPP1R9AQ9ULJ8 1098 aa13.78□□□□□ -0.2
DDX39A-219ENST00000592927 SPDYE16A6NNV3 312 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-219ENST00000592927 ZBTB43O43298 467 aa13.77□□□□□ -0.21
DDX39A-219ENST00000592927 DHX16O60231 1041 aaKnown RBP13.77□□□□□ -0.21
DDX39A-219ENST00000592927 RCAN1P53805 252 aa13.77□□□□□ -0.21
DDX39A-219ENST00000592927 ATN1P54259 1190 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-219ENST00000592927 NUCB2P80303 420 aa13.77□□□□□ -0.21
DDX39A-219ENST00000592927 TTBK2Q6IQ55 1244 aa13.77□□□□□ -0.21
DDX39A-219ENST00000592927 APOA5Q6Q788 366 aa13.77□□□□□ -0.21
DDX39A-219ENST00000592927 LBX2Q6XYB7 198 aa13.77□□□□□ -0.21
DDX39A-219ENST00000592927 MICU3Q86XE3 530 aa13.77□□□□□ -0.21
DDX39A-219ENST00000592927 LARP6Q9BRS8 491 aaKnown RBP13.77□□□□□ -0.21
DDX39A-219ENST00000592927 FOXD4L1Q9NU39 408 aa13.77□□□□□ -0.21
DDX39A-219ENST00000592927 SMC3Q9UQE7 1217 aa13.77□□□□□ -0.21
DDX39A-219ENST00000592927 HCN4Q9Y3Q4 1203 aa13.77□□□□□ -0.21
DDX39A-219ENST00000592927 CTDP1Q9Y5B0 961 aaPredicted RBP13.77□□□□□ -0.21
DDX39A-219ENST00000592927 PALM3A6NDB9 673 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-219ENST00000592927 GOLGA8BA8MQT2 603 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 KLRF2D3W0D1 207 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 ZBED4O75132 1171 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 RXRAP19793 462 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 PDIA3P30101 505 aaKnown RBP13.76□□□□□ -0.21
DDX39A-219ENST00000592927 CCND3P30281 292 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-219ENST00000592927 SLC16A2P36021 539 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 GNAQP50148 359 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 CACNB2Q08289 660 aaPredicted RBP13.76□□□□□ -0.21
DDX39A-219ENST00000592927 SYDE2Q5VT97 1194 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 BTNL9Q6UXG8 535 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 ALYREFQ86V81 257 aaKnown RBP13.76□□□□□ -0.21
DDX39A-219ENST00000592927 RAB11FIP4Q86YS3 637 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 CCDC144CPQ8IYA2 1237 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 STAG2Q8N3U4 1231 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 MB21D1Q8N884 522 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 FANCBQ8NB91 859 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 ATG4CQ96DT6 458 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 PAGR1Q9BTK6 254 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 UBA5Q9GZZ9 404 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 MAD2L2Q9UI95 211 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 PRR12Q9ULL5 1215 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 RABGAP1Q9Y3P9 1069 aa13.76□□□□□ -0.21
DDX39A-219ENST00000592927 NID2Q14112 1375 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 GOLGA8AA7E2F4 631 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 VWA5AO00534 786 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 FDX1P10109 184 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 METAP2P50579 478 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX39A-219ENST00000592927 MRPS5P82675 430 aaKnown RBP13.75□□□□□ -0.21
DDX39A-219ENST00000592927 PPP2R5BQ15173 497 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 RTN1Q16799 776 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 NECAB1Q8N987 351 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 GPRC5AQ8NFJ5 357 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 BADQ92934 168 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 LZTS2Q9BRK4 669 aa13.75□□□□□ -0.21
DDX39A-219ENST00000592927 RBM28Q9NW13 759 aaKnown RBP13.75□□□□□ -0.21
DDX39A-219ENST00000592927 THEGQ9P2T0 379 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms