RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 SLC39A5Q6ZMH5 540 aa16.26■□□□□ 0.19
APOC1-208ENST00000592535 RNF180Q86T96 592 aa16.26■□□□□ 0.19
APOC1-208ENST00000592535 PURBQ96QR8 312 aaKnown RBP16.26■□□□□ 0.19
APOC1-208ENST00000592535 PHF24Q9UPV7 400 aa16.26■□□□□ 0.19
APOC1-208ENST00000592535 TAF6LQ9Y6J9 622 aa16.26■□□□□ 0.19
APOC1-208ENST00000592535 DDX49Q9Y6V7 483 aaKnown RBP16.26■□□□□ 0.19
APOC1-208ENST00000592535 U3KPZ7 1027 aaPredicted RBP16.26■□□□□ 0.19
APOC1-208ENST00000592535 LTBP2Q14767 1821 aa16.26■□□□□ 0.19
APOC1-208ENST00000592535 WDR19Q8NEZ3 1342 aa16.25■□□□□ 0.19
APOC1-208ENST00000592535 ASB14A6NK59 587 aa16.25■□□□□ 0.19
APOC1-208ENST00000592535 MAGEA10P43363 369 aaPredicted RBP16.25■□□□□ 0.19
APOC1-208ENST00000592535 SEC23AQ15436 765 aa16.25■□□□□ 0.19
APOC1-208ENST00000592535 CENPQQ7L2Z9 268 aaPredicted RBP16.25■□□□□ 0.19
APOC1-208ENST00000592535 CLEC4DQ8WXI8 215 aa16.25■□□□□ 0.19
APOC1-208ENST00000592535 ATP11BQ9Y2G3 1177 aa16.25■□□□□ 0.19
APOC1-208ENST00000592535 MYADML2A6NDP7 307 aa16.24■□□□□ 0.19
APOC1-208ENST00000592535 DUSP11O75319 330 aaKnown RBP16.24■□□□□ 0.19
APOC1-208ENST00000592535 IRX5P78411 483 aaPredicted RBP16.24■□□□□ 0.19
APOC1-208ENST00000592535 TRDNQ13061 729 aa16.24■□□□□ 0.19
APOC1-208ENST00000592535 BAATQ14032 418 aaPredicted RBP16.24■□□□□ 0.19
APOC1-208ENST00000592535 SNX17Q15036 470 aa16.24■□□□□ 0.19
APOC1-208ENST00000592535 TRIM60Q495X7 471 aa16.24■□□□□ 0.19
APOC1-208ENST00000592535 ASPRV1Q53RT3 343 aa16.24■□□□□ 0.19
APOC1-208ENST00000592535 IFIT1BQ5T764 474 aaKnown RBP16.24■□□□□ 0.19
APOC1-208ENST00000592535 SLC30A10Q6XR72 485 aa16.24■□□□□ 0.19
APOC1-208ENST00000592535 KLHDC9Q8NEP7 349 aa16.24■□□□□ 0.19
APOC1-208ENST00000592535 A0A1W2PPC1 479 aa16.23■□□□□ 0.19
APOC1-208ENST00000592535 PTPDC1A2A3K4 754 aa16.23■□□□□ 0.19
APOC1-208ENST00000592535 E7EWF7 191 aa16.23■□□□□ 0.19
APOC1-208ENST00000592535 PARP1P09874 1014 aaKnown RBP16.23■□□□□ 0.19
APOC1-208ENST00000592535 BMP8BP34820 402 aa16.23■□□□□ 0.19
APOC1-208ENST00000592535 CDC37Q16543 378 aaPredicted RBP16.23■□□□□ 0.19
APOC1-208ENST00000592535 USH1GQ495M9 461 aa16.23■□□□□ 0.19
APOC1-208ENST00000592535 STOX1Q6ZVD7 989 aa16.23■□□□□ 0.19
APOC1-208ENST00000592535 MAP4K1Q92918 833 aa16.23■□□□□ 0.19
APOC1-208ENST00000592535 PNMA2Q9UL42 364 aa16.23■□□□□ 0.19
APOC1-208ENST00000592535 RBM8AQ9Y5S9 174 aaKnown RBP16.23■□□□□ 0.19
APOC1-208ENST00000592535 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.22■□□□□ 0.19
APOC1-208ENST00000592535 A0A1W2PQ45 241 aaPredicted RBP16.22■□□□□ 0.19
APOC1-208ENST00000592535 A0A1W2PQY0 241 aa16.22■□□□□ 0.19
APOC1-208ENST00000592535 C6orf222P0C671 652 aaPredicted RBP16.22■□□□□ 0.19
APOC1-208ENST00000592535 CALML3P27482 149 aa16.22■□□□□ 0.19
APOC1-208ENST00000592535 ALDH5A1P51649 535 aaPredicted RBP16.22■□□□□ 0.19
APOC1-208ENST00000592535 ACLYP53396 1101 aa16.22■□□□□ 0.19
APOC1-208ENST00000592535 MDM2Q00987 491 aaPredicted RBP16.22■□□□□ 0.19
APOC1-208ENST00000592535 CCSAPQ6IQ19 270 aaPredicted RBP16.22■□□□□ 0.19
APOC1-208ENST00000592535 RNF207Q6ZRF8 634 aa16.22■□□□□ 0.19
APOC1-208ENST00000592535 EEPD1Q7L9B9 569 aa16.22■□□□□ 0.19
APOC1-208ENST00000592535 FBXO16Q8IX29 292 aaPredicted RBP16.22■□□□□ 0.19
APOC1-208ENST00000592535 ADGRF4Q8IZF3 695 aa16.22■□□□□ 0.19
APOC1-208ENST00000592535 STAG2Q8N3U4 1231 aa16.22■□□□□ 0.19
APOC1-208ENST00000592535 TSEN34Q9BSV6 310 aaKnown RBP16.22■□□□□ 0.19
APOC1-208ENST00000592535 UPF3AQ9H1J1 476 aaKnown RBP16.22■□□□□ 0.19
APOC1-208ENST00000592535 IFIT3O14879 490 aaKnown RBP16.21■□□□□ 0.19
APOC1-208ENST00000592535 DHX16O60231 1041 aaKnown RBP16.21■□□□□ 0.19
APOC1-208ENST00000592535 CST5P28325 142 aaPredicted RBP16.21■□□□□ 0.19
APOC1-208ENST00000592535 GJA9P57773 515 aa16.21■□□□□ 0.19
APOC1-208ENST00000592535 TNFAIP2Q03169 654 aa16.21■□□□□ 0.19
APOC1-208ENST00000592535 KCNA10Q16322 511 aa16.21■□□□□ 0.19
APOC1-208ENST00000592535 C1orf53Q5VUE5 145 aa16.21■□□□□ 0.19
APOC1-208ENST00000592535 CHST3Q7LGC8 479 aa16.21■□□□□ 0.19
APOC1-208ENST00000592535 RALYLQ86SE5 291 aaKnown RBP16.21■□□□□ 0.19
APOC1-208ENST00000592535 NCOA7Q8NI08 942 aa16.21■□□□□ 0.19
APOC1-208ENST00000592535 MORC4Q8TE76 937 aa16.21■□□□□ 0.19
APOC1-208ENST00000592535 ESYT1Q9BSJ8 1104 aa16.21■□□□□ 0.19
APOC1-208ENST00000592535 UBE2OQ9C0C9 1292 aaKnown RBP16.21■□□□□ 0.19
APOC1-208ENST00000592535 LSG1Q9H089 658 aaKnown RBP16.21■□□□□ 0.19
APOC1-208ENST00000592535 SENP2Q9HC62 589 aa16.21■□□□□ 0.19
APOC1-208ENST00000592535 VAT1LQ9HCJ6 419 aa16.21■□□□□ 0.19
APOC1-208ENST00000592535 PDGFCQ9NRA1 345 aa16.21■□□□□ 0.19
APOC1-208ENST00000592535 ADD3Q9UEY8 706 aaKnown RBP16.21■□□□□ 0.19
APOC1-208ENST00000592535 MOXD2PA6NHM9 499 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 CTAGE5O15320 804 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 PTGS1P23219 599 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 RPS6P62753 249 aaKnown RBP16.2■□□□□ 0.18
APOC1-208ENST00000592535 TLE2Q04725 743 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 QRICH1Q2TAL8 776 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 BMP2KLQ5H9B9 411 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 TAPT1Q6NXT6 567 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 KIAA1211Q6ZU35 1233 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 NOL8Q76FK4 1167 aaKnown RBP16.2■□□□□ 0.18
APOC1-208ENST00000592535 JMJD4Q9H9V9 463 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 SPC25Q9HBM1 224 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 PRDM5Q9NQX1 630 aaPredicted RBP16.2■□□□□ 0.18
APOC1-208ENST00000592535 STARD7Q9NQZ5 370 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 PRKAG2Q9UGJ0 569 aa16.2■□□□□ 0.18
APOC1-208ENST00000592535 GNEQ9Y223 722 aaKnown RBP16.2■□□□□ 0.18
APOC1-208ENST00000592535 BAZ2BQ9UIF8 2168 aaKnown RBP16.19■□□□□ 0.18
APOC1-208ENST00000592535 ERICH2A1L162 156 aa16.19■□□□□ 0.18
APOC1-208ENST00000592535 SOX1O00570 391 aaPredicted RBP16.19■□□□□ 0.18
APOC1-208ENST00000592535 SMPD1P17405 629 aa16.19■□□□□ 0.18
APOC1-208ENST00000592535 ANTXR2P58335 489 aa16.19■□□□□ 0.18
APOC1-208ENST00000592535 BEX3Q00994 111 aa16.19■□□□□ 0.18
APOC1-208ENST00000592535 TMEM63BQ5T3F8 832 aa16.19■□□□□ 0.18
APOC1-208ENST00000592535 SH3RF1Q7Z6J0 888 aa16.19■□□□□ 0.18
APOC1-208ENST00000592535 MB21D2Q8IYB1 491 aaPredicted RBP16.19■□□□□ 0.18
APOC1-208ENST00000592535 PCSK9Q8NBP7 692 aaKnown RBP16.19■□□□□ 0.18
APOC1-208ENST00000592535 VTA1Q9NP79 307 aa16.19■□□□□ 0.18
APOC1-208ENST00000592535 PDLIM7Q9NR12 457 aa16.19■□□□□ 0.18
APOC1-208ENST00000592535 MAD2L2Q9UI95 211 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms