RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 IL27Q8NEV9 243 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 VTI1AQ96AJ9 217 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 DSCC1Q9BVC3 393 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 TEX13BQ9BXU2 312 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 SPC25Q9HBM1 224 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 RAPGEFL1Q9UHV5 662 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 MSRAQ9UJ68 235 aa12.95□□□□□ -0.34
GFAP-217ENST00000590922 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
GFAP-217ENST00000590922 MYH4Q9Y623 1939 aa12.94□□□□□ -0.34
GFAP-217ENST00000590922 GBF1Q92538 1859 aa12.94□□□□□ -0.34
GFAP-217ENST00000590922 DNAJC25-GNG10A0A024R161 153 aa12.94□□□□□ -0.34
GFAP-217ENST00000590922 A0A0U1RQG5 324 aaPredicted RBP12.94□□□□□ -0.34
GFAP-217ENST00000590922 TSPY2A6NKD2 308 aa12.94□□□□□ -0.34
GFAP-217ENST00000590922 ARVCFO00192 962 aa12.94□□□□□ -0.34
GFAP-217ENST00000590922 TLR3O15455 904 aaKnown RBP12.94□□□□□ -0.34
GFAP-217ENST00000590922 ACRP10323 421 aa12.94□□□□□ -0.34
GFAP-217ENST00000590922 IGFBP4P22692 258 aa12.94□□□□□ -0.34
GFAP-217ENST00000590922 CCDC85BQ15834 202 aaPredicted RBP12.94□□□□□ -0.34
GFAP-217ENST00000590922 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
GFAP-217ENST00000590922 ZNF467Q7Z7K2 595 aaPredicted RBP12.94□□□□□ -0.34
GFAP-217ENST00000590922 LRRC47Q8N1G4 583 aaKnown RBP12.94□□□□□ -0.34
GFAP-217ENST00000590922 RUFY2Q8WXA3 655 aa12.94□□□□□ -0.34
GFAP-217ENST00000590922 UHRF1Q96T88 793 aaPredicted RBP12.94□□□□□ -0.34
GFAP-217ENST00000590922 SLF1Q9BQI6 1058 aa12.94□□□□□ -0.34
GFAP-217ENST00000590922 IL17RBQ9NRM6 502 aa12.94□□□□□ -0.34
GFAP-217ENST00000590922 RAD50Q92878 1312 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 F5H6K3 240 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 ZNF213O14771 459 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 SGSM2O43147 1006 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 TTLL1O95922 423 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 PLA2G5P39877 138 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 PTH1RQ03431 593 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 KLRC3Q07444 240 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 ACVR2BQ13705 512 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 ADGRE1Q14246 886 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 GNASQ5JWF2 1037 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 MFSD6Q6ZSS7 791 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 FAM126BQ8IXS8 530 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 STAG1Q8WVM7 1258 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 HERVK_113Q902F9 699 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 MKL1Q969V6 931 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 NUP88Q99567 741 aaPredicted RBP12.93□□□□□ -0.34
GFAP-217ENST00000590922 PPP1R12CQ9BZL4 782 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 UPF3AQ9H1J1 476 aaKnown RBP12.93□□□□□ -0.34
GFAP-217ENST00000590922 MTIF3Q9H2K0 278 aaKnown RBP12.93□□□□□ -0.34
GFAP-217ENST00000590922 ABHD16BQ9H3Z7 469 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 SLC28A3Q9HAS3 691 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 CHD7Q9P2D1 2997 aa12.93□□□□□ -0.34
GFAP-217ENST00000590922 NEDD4P46934 1319 aa12.92□□□□□ -0.34
GFAP-217ENST00000590922 ADCY6O43306 1168 aa12.92□□□□□ -0.34
GFAP-217ENST00000590922 NDUFB10O96000 172 aa12.92□□□□□ -0.34
GFAP-217ENST00000590922 GJA9P57773 515 aa12.92□□□□□ -0.34
GFAP-217ENST00000590922 IRX5P78411 483 aaPredicted RBP12.92□□□□□ -0.34
GFAP-217ENST00000590922 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
GFAP-217ENST00000590922 BMP2KLQ5H9B9 411 aa12.92□□□□□ -0.34
GFAP-217ENST00000590922 PRPF38AQ8NAV1 312 aaKnown RBP12.92□□□□□ -0.34
GFAP-217ENST00000590922 CHMP4CQ96CF2 233 aa12.92□□□□□ -0.34
GFAP-217ENST00000590922 IL23AQ9NPF7 189 aa12.92□□□□□ -0.34
GFAP-217ENST00000590922 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.92□□□□□ -0.34
GFAP-217ENST00000590922 STX8Q9UNK0 236 aa12.92□□□□□ -0.34
GFAP-217ENST00000590922 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
GFAP-217ENST00000590922 TCF20Q9UGU0 1960 aaKnown RBP12.91□□□□□ -0.34
GFAP-217ENST00000590922 ATP2A1O14983 1001 aa12.91□□□□□ -0.34
GFAP-217ENST00000590922 CD4P01730 458 aa12.91□□□□□ -0.34
GFAP-217ENST00000590922 FGBP02675 491 aa12.91□□□□□ -0.34
GFAP-217ENST00000590922 CYP2C18P33260 490 aa12.91□□□□□ -0.34
GFAP-217ENST00000590922 SLC4A3P48751 1232 aa12.91□□□□□ -0.34
GFAP-217ENST00000590922 IMMTQ16891 758 aaKnown RBP12.91□□□□□ -0.34
GFAP-217ENST00000590922 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.91□□□□□ -0.34
GFAP-217ENST00000590922 FAM122AQ96E09 287 aa12.91□□□□□ -0.34
GFAP-217ENST00000590922 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
GFAP-217ENST00000590922 NKX2-4Q9H2Z4 354 aa12.91□□□□□ -0.34
GFAP-217ENST00000590922 RNF41Q9H4P4 317 aaPredicted RBP12.91□□□□□ -0.34
GFAP-217ENST00000590922 PPP4R2Q9NY27 417 aa12.91□□□□□ -0.34
GFAP-217ENST00000590922 CXXC1Q9P0U4 656 aaPredicted RBP12.91□□□□□ -0.34
GFAP-217ENST00000590922 CTNNA3Q9UI47 895 aa12.91□□□□□ -0.34
GFAP-217ENST00000590922 LAMA4Q16363 1823 aa12.9□□□□□ -0.34
GFAP-217ENST00000590922 ZBED4O75132 1171 aa12.9□□□□□ -0.34
GFAP-217ENST00000590922 PCP11498 1178 aaKnown RBP12.9□□□□□ -0.34
GFAP-217ENST00000590922 SLFN13Q68D06 897 aa12.9□□□□□ -0.34
GFAP-217ENST00000590922 ARMCX2Q7L311 632 aa12.9□□□□□ -0.34
GFAP-217ENST00000590922 RASGRP2Q7LDG7 609 aa12.9□□□□□ -0.34
GFAP-217ENST00000590922 CPXCR1Q8N123 301 aa12.9□□□□□ -0.34
GFAP-217ENST00000590922 ANKRD35Q8N283 1001 aa12.9□□□□□ -0.34
GFAP-217ENST00000590922 GMCL1P1Q8NEA9 526 aa12.9□□□□□ -0.34
GFAP-217ENST00000590922 HIPK3Q9H422 1215 aa12.9□□□□□ -0.34
GFAP-217ENST00000590922 FBXO40Q9UH90 709 aa12.9□□□□□ -0.34
GFAP-217ENST00000590922 CTDP1Q9Y5B0 961 aaPredicted RBP12.9□□□□□ -0.34
GFAP-217ENST00000590922 B4E1Z4 1266 aa12.89□□□□□ -0.35
GFAP-217ENST00000590922 CTAGE5O15320 804 aa12.89□□□□□ -0.35
GFAP-217ENST00000590922 KDM4AO75164 1064 aa12.89□□□□□ -0.35
GFAP-217ENST00000590922 MCCP23508 829 aa12.89□□□□□ -0.35
GFAP-217ENST00000590922 NOVP48745 357 aa12.89□□□□□ -0.35
GFAP-217ENST00000590922 NKX3-2P78367 333 aa12.89□□□□□ -0.35
GFAP-217ENST00000590922 PPP4R3BQ5MIZ7 849 aa12.89□□□□□ -0.35
GFAP-217ENST00000590922 CCDC144CPQ8IYA2 1237 aa12.89□□□□□ -0.35
GFAP-217ENST00000590922 CHST13Q8NET6 341 aa12.89□□□□□ -0.35
GFAP-217ENST00000590922 ESR2Q92731 530 aa12.89□□□□□ -0.35
GFAP-217ENST00000590922 FGD4Q96M96 766 aa12.89□□□□□ -0.35
GFAP-217ENST00000590922 ZKSCAN3Q9BRR0 538 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms