RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 CCDC144BQ3MJ40 725 aa16.11■□□□□ 0.17
NEDD4L-228ENST00000590248 EEPD1Q7L9B9 569 aa16.11■□□□□ 0.17
NEDD4L-228ENST00000590248 ANKS1AQ92625 1134 aa16.11■□□□□ 0.17
NEDD4L-228ENST00000590248 GDF15Q99988 308 aa16.11■□□□□ 0.17
NEDD4L-228ENST00000590248 KATNBL1Q9H079 304 aa16.11■□□□□ 0.17
NEDD4L-228ENST00000590248 ABHD16BQ9H3Z7 469 aa16.11■□□□□ 0.17
NEDD4L-228ENST00000590248 CNNM2Q9H8M5 875 aa16.11■□□□□ 0.17
NEDD4L-228ENST00000590248 ATP11BQ9Y2G3 1177 aa16.11■□□□□ 0.17
NEDD4L-228ENST00000590248 SZT2Q5T011 3432 aa16.1■□□□□ 0.17
NEDD4L-228ENST00000590248 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.1■□□□□ 0.17
NEDD4L-228ENST00000590248 MDM2Q00987 491 aaPredicted RBP16.1■□□□□ 0.17
NEDD4L-228ENST00000590248 TMEM63BQ5T3F8 832 aa16.1■□□□□ 0.17
NEDD4L-228ENST00000590248 CHST3Q7LGC8 479 aa16.1■□□□□ 0.17
NEDD4L-228ENST00000590248 RNF180Q86T96 592 aa16.1■□□□□ 0.17
NEDD4L-228ENST00000590248 CLEC4DQ8WXI8 215 aa16.1■□□□□ 0.17
NEDD4L-228ENST00000590248 UBAC1Q9BSL1 405 aa16.1■□□□□ 0.17
NEDD4L-228ENST00000590248 VAT1LQ9HCJ6 419 aa16.1■□□□□ 0.17
NEDD4L-228ENST00000590248 SYNRGQ9UMZ2 1314 aa16.1■□□□□ 0.17
NEDD4L-228ENST00000590248 SEC23AQ15436 765 aa16.09■□□□□ 0.17
NEDD4L-228ENST00000590248 USH1GQ495M9 461 aa16.09■□□□□ 0.17
NEDD4L-228ENST00000590248 TRIM60Q495X7 471 aa16.09■□□□□ 0.17
NEDD4L-228ENST00000590248 CCDC178Q5BJE1 867 aa16.09■□□□□ 0.17
NEDD4L-228ENST00000590248 STOX1Q6ZVD7 989 aa16.09■□□□□ 0.17
NEDD4L-228ENST00000590248 SENP2Q9HC62 589 aa16.09■□□□□ 0.17
NEDD4L-228ENST00000590248 PDGFCQ9NRA1 345 aa16.09■□□□□ 0.17
NEDD4L-228ENST00000590248 PHF24Q9UPV7 400 aa16.09■□□□□ 0.17
NEDD4L-228ENST00000590248 LRRC37A2A6NM11 1700 aa16.08■□□□□ 0.17
NEDD4L-228ENST00000590248 PTPDC1A2A3K4 754 aa16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 E7EWF7 191 aa16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 DUSP11O75319 330 aaKnown RBP16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 CALML3P27482 149 aa16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 KCNA10Q16322 511 aa16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 GPATCH4Q5T3I0 446 aaKnown RBP16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 IFIT1BQ5T764 474 aaKnown RBP16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 SLC30A10Q6XR72 485 aa16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 ADGRF4Q8IZF3 695 aa16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 KLHDC9Q8NEP7 349 aa16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 MAP4K1Q92918 833 aa16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
NEDD4L-228ENST00000590248 ASB14A6NK59 587 aa16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 PARP1P09874 1014 aaKnown RBP16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 C6orf222P0C671 652 aaPredicted RBP16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 NT5C2P49902 561 aa16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 ACLYP53396 1101 aa16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 TRDNQ13061 729 aa16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 CDC37Q16543 378 aaPredicted RBP16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 RNF207Q6ZRF8 634 aa16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 NOL8Q76FK4 1167 aaKnown RBP16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 SH3RF1Q7Z6J0 888 aa16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 FBXO16Q8IX29 292 aaPredicted RBP16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 TBC1D5Q92609 795 aa16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 PRDM5Q9NQX1 630 aaPredicted RBP16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 RBM8AQ9Y5S9 174 aaKnown RBP16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 LTBP2Q14767 1821 aa16.07■□□□□ 0.16
NEDD4L-228ENST00000590248 A0A1W2PQ45 241 aaPredicted RBP16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 A0A1W2PQY0 241 aa16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 DHX16O60231 1041 aaKnown RBP16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 BMP8BP34820 402 aa16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 ALDH5A1P51649 535 aaPredicted RBP16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 RPS6P62753 249 aaKnown RBP16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 BEX3Q00994 111 aa16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 TNFAIP2Q03169 654 aa16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 TLE2Q04725 743 aa16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 SNX17Q15036 470 aa16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 ASPRV1Q53RT3 343 aa16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 CCSAPQ6IQ19 270 aaPredicted RBP16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 CENPQQ7L2Z9 268 aaPredicted RBP16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 UBE2OQ9C0C9 1292 aaKnown RBP16.06■□□□□ 0.16
NEDD4L-228ENST00000590248 WDR19Q8NEZ3 1342 aa16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 SOX1O00570 391 aaPredicted RBP16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 IFIT3O14879 490 aaKnown RBP16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 SMPD1P17405 629 aa16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 GJA9P57773 515 aa16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 COL9A3Q14050 684 aaPredicted RBP16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 QRICH1Q2TAL8 776 aa16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 TAPT1Q6NXT6 567 aa16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 NCOA7Q8NI08 942 aa16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 ESYT1Q9BSJ8 1104 aa16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 JMJD4Q9H9V9 463 aa16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 LAMA3Q16787 3333 aa16.05■□□□□ 0.16
NEDD4L-228ENST00000590248 CTAGE5O15320 804 aa16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 DYNC1LI2O43237 492 aaPredicted RBP16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 PQBP1O60828 265 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 ASGR1P07306 291 aa16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 ANTXR2P58335 489 aa16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 GNASQ5JWF2 1037 aa16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 KIAA1211Q6ZU35 1233 aa16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 RALYLQ86SE5 291 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 LRCH3Q96II8 777 aa16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 TSEN34Q9BSV6 310 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 LSG1Q9H089 658 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 GPHNQ9NQX3 736 aaPredicted RBP16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 STARD7Q9NQZ5 370 aa16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 PRKAG2Q9UGJ0 569 aa16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 MAD2L2Q9UI95 211 aa16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 GNEQ9Y223 722 aaKnown RBP16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 MYH7BA7E2Y1 1941 aa16.04■□□□□ 0.16
NEDD4L-228ENST00000590248 TRIM43BA6NCK2 446 aa16.03■□□□□ 0.16
NEDD4L-228ENST00000590248 PALM3A6NDB9 673 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms