RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 MAF1Q9H063 256 aa21.77■■□□□ 1.08
MBD1-223ENST00000590215 FAM217BQ9NTX9 383 aaPredicted RBP21.77■■□□□ 1.08
MBD1-223ENST00000590215 PDRG1Q9NUG6 133 aa21.77■■□□□ 1.08
MBD1-223ENST00000590215 PNMA6FA0A0J9YX94 578 aa21.76■■□□□ 1.07
MBD1-223ENST00000590215 HMGCRP04035 888 aa21.76■■□□□ 1.07
MBD1-223ENST00000590215 TAL1P17542 331 aaPredicted RBP21.76■■□□□ 1.07
MBD1-223ENST00000590215 CENPFP49454 3210 aa21.76■■□□□ 1.07
MBD1-223ENST00000590215 RBM25P49756 843 aaKnown RBP21.76■■□□□ 1.07
MBD1-223ENST00000590215 CCL14Q16627 93 aa21.76■■□□□ 1.07
MBD1-223ENST00000590215 RTN1Q16799 776 aa21.76■■□□□ 1.07
MBD1-223ENST00000590215 OLFML2BQ68BL8 750 aa21.76■■□□□ 1.07
MBD1-223ENST00000590215 FBXO11Q86XK2 927 aa21.76■■□□□ 1.07
MBD1-223ENST00000590215 CCDC144CPQ8IYA2 1237 aa21.76■■□□□ 1.07
MBD1-223ENST00000590215 ANKRD35Q8N283 1001 aa21.76■■□□□ 1.07
MBD1-223ENST00000590215 PIGSQ96S52 555 aa21.76■■□□□ 1.07
MBD1-223ENST00000590215 A1CFQ9NQ94 594 aaKnown RBP21.76■■□□□ 1.07
MBD1-223ENST00000590215 ABCB11O95342 1321 aa21.76■■□□□ 1.07
MBD1-223ENST00000590215 GOLGA8AA7E2F4 631 aa21.75■■□□□ 1.07
MBD1-223ENST00000590215 GOLGA8BA8MQT2 603 aa21.75■■□□□ 1.07
MBD1-223ENST00000590215 PPP1R11O60927 126 aaPredicted RBP21.75■■□□□ 1.07
MBD1-223ENST00000590215 FUT2Q10981 343 aa21.75■■□□□ 1.07
MBD1-223ENST00000590215 MAP3K21Q5TCX8 1036 aa21.75■■□□□ 1.07
MBD1-223ENST00000590215 RGS22Q8NE09 1264 aa21.75■■□□□ 1.07
MBD1-223ENST00000590215 AMNQ9BXJ7 453 aa21.75■■□□□ 1.07
MBD1-223ENST00000590215 C22orf23Q9BZE7 217 aa21.75■■□□□ 1.07
MBD1-223ENST00000590215 FLRT1Q9NZU1 646 aa21.75■■□□□ 1.07
MBD1-223ENST00000590215 PFASO15067 1338 aa21.75■■□□□ 1.07
MBD1-223ENST00000590215 NFIBO00712 420 aa21.74■■□□□ 1.07
MBD1-223ENST00000590215 INHAP05111 366 aa21.74■■□□□ 1.07
MBD1-223ENST00000590215 PGK2P07205 417 aa21.74■■□□□ 1.07
MBD1-223ENST00000590215 PDIA3P30101 505 aaKnown RBP21.74■■□□□ 1.07
MBD1-223ENST00000590215 DDX11Q96FC9 970 aa21.74■■□□□ 1.07
MBD1-223ENST00000590215 ZNF274Q96GC6 653 aaPredicted RBP21.74■■□□□ 1.07
MBD1-223ENST00000590215 MAML3Q96JK9 1138 aa21.74■■□□□ 1.07
MBD1-223ENST00000590215 KIF2CQ99661 725 aa21.74■■□□□ 1.07
MBD1-223ENST00000590215 CYP39A1Q9NYL5 469 aa21.74■■□□□ 1.07
MBD1-223ENST00000590215 CCDC196A0A1B0GTZ2 297 aa21.73■■□□□ 1.07
MBD1-223ENST00000590215 CDC27P30260 824 aa21.73■■□□□ 1.07
MBD1-223ENST00000590215 METAP2P50579 478 aaKnown RBP eCLIP21.73■■□□□ 1.07
MBD1-223ENST00000590215 UBXN2AP68543 259 aa21.73■■□□□ 1.07
MBD1-223ENST00000590215 TRAF1Q13077 416 aa21.73■■□□□ 1.07
MBD1-223ENST00000590215 USH1GQ495M9 461 aa21.73■■□□□ 1.07
MBD1-223ENST00000590215 ZNF467Q7Z7K2 595 aaPredicted RBP21.73■■□□□ 1.07
MBD1-223ENST00000590215 HOMER1Q86YM7 354 aa21.73■■□□□ 1.07
MBD1-223ENST00000590215 FAM133AQ8N9E0 248 aa21.73■■□□□ 1.07
MBD1-223ENST00000590215 RRP36Q96EU6 259 aaKnown RBP21.73■■□□□ 1.07
MBD1-223ENST00000590215 FGD4Q96M96 766 aa21.73■■□□□ 1.07
MBD1-223ENST00000590215 BACH2Q9BYV9 841 aa21.73■■□□□ 1.07
MBD1-223ENST00000590215 MRPL11Q9Y3B7 192 aaKnown RBP21.73■■□□□ 1.07
MBD1-223ENST00000590215 KIAA0100Q14667 2235 aaKnown RBP21.73■■□□□ 1.07
MBD1-223ENST00000590215 ADD1P35611 737 aaKnown RBP21.72■■□□□ 1.07
MBD1-223ENST00000590215 CMTR1Q8N1G2 835 aaKnown RBP21.72■■□□□ 1.07
MBD1-223ENST00000590215 MSL3Q8N5Y2 521 aaKnown RBP21.72■■□□□ 1.07
MBD1-223ENST00000590215 BIN2Q9UBW5 565 aaPredicted RBP21.72■■□□□ 1.07
MBD1-223ENST00000590215 PCDHA1Q9Y5I3 950 aa21.72■■□□□ 1.07
MBD1-223ENST00000590215 MYH6P13533 1939 aa21.72■■□□□ 1.07
MBD1-223ENST00000590215 POTEB2H3BUK9 544 aa21.71■■□□□ 1.07
MBD1-223ENST00000590215 GHRHRQ02643 423 aa21.71■■□□□ 1.07
MBD1-223ENST00000590215 TRIM32Q13049 653 aa21.71■■□□□ 1.07
MBD1-223ENST00000590215 ANKRD1Q15327 319 aa21.71■■□□□ 1.07
MBD1-223ENST00000590215 MFSD14CQ5VZR4 134 aa21.71■■□□□ 1.07
MBD1-223ENST00000590215 MAMDC4Q6UXC1 1216 aa21.71■■□□□ 1.07
MBD1-223ENST00000590215 NSMFQ6X4W1 530 aa21.71■■□□□ 1.07
MBD1-223ENST00000590215 UPF2Q9HAU5 1272 aaKnown RBP21.71■■□□□ 1.07
MBD1-223ENST00000590215 CNTNAP5Q8WYK1 1306 aa21.71■■□□□ 1.07
MBD1-223ENST00000590215 OPLAHO14841 1288 aa21.7■■□□□ 1.06
MBD1-223ENST00000590215 NEK4P51957 841 aa21.7■■□□□ 1.06
MBD1-223ENST00000590215 CACNB2Q08289 660 aaPredicted RBP21.7■■□□□ 1.06
MBD1-223ENST00000590215 BAATQ14032 418 aaPredicted RBP21.7■■□□□ 1.06
MBD1-223ENST00000590215 MTFR1Q15390 333 aa21.7■■□□□ 1.06
MBD1-223ENST00000590215 NTRK3Q16288 839 aa21.7■■□□□ 1.06
MBD1-223ENST00000590215 SAMD3Q8N6K7 520 aa21.7■■□□□ 1.06
MBD1-223ENST00000590215 TINF2Q9BSI4 451 aa21.7■■□□□ 1.06
MBD1-223ENST00000590215 SEC63Q9UGP8 760 aaKnown RBP21.7■■□□□ 1.06
MBD1-223ENST00000590215 NAP1L2Q9ULW6 460 aaPredicted RBP21.7■■□□□ 1.06
MBD1-223ENST00000590215 PLXNA1Q9UIW2 1896 aa21.69■■□□□ 1.06
MBD1-223ENST00000590215 PRKAR2AP13861 404 aaKnown RBP21.69■■□□□ 1.06
MBD1-223ENST00000590215 AK2P54819 239 aa21.69■■□□□ 1.06
MBD1-223ENST00000590215 RPS6P62753 249 aaKnown RBP21.69■■□□□ 1.06
MBD1-223ENST00000590215 CNTN2Q02246 1040 aa21.69■■□□□ 1.06
MBD1-223ENST00000590215 RNF207Q6ZRF8 634 aa21.69■■□□□ 1.06
MBD1-223ENST00000590215 MCF2L2Q86YR7 1114 aa21.69■■□□□ 1.06
MBD1-223ENST00000590215 CCDC82Q8N4S0 544 aa21.69■■□□□ 1.06
MBD1-223ENST00000590215 NRBP1Q9UHY1 535 aa21.69■■□□□ 1.06
MBD1-223ENST00000590215 RPTORQ8N122 1335 aa21.69■■□□□ 1.06
MBD1-223ENST00000590215 SOWAHBA6NEL2 793 aa21.68■■□□□ 1.06
MBD1-223ENST00000590215 CCL5P13501 91 aa21.68■■□□□ 1.06
MBD1-223ENST00000590215 CYP2C19P33261 490 aa21.68■■□□□ 1.06
MBD1-223ENST00000590215 TBC1D32Q96NH3 1257 aa21.68■■□□□ 1.06
MBD1-223ENST00000590215 UNC93B1Q9H1C4 597 aa21.68■■□□□ 1.06
MBD1-223ENST00000590215 PAK6Q9NQU5 681 aaPredicted RBP21.68■■□□□ 1.06
MBD1-223ENST00000590215 MAP3K20Q9NYL2 800 aaKnown RBP21.68■■□□□ 1.06
MBD1-223ENST00000590215 TPCN1Q9ULQ1 816 aa21.68■■□□□ 1.06
MBD1-223ENST00000590215 SYNGAP1Q96PV0 1343 aa21.68■■□□□ 1.06
MBD1-223ENST00000590215 ASTN1O14525 1302 aa21.67■■□□□ 1.06
MBD1-223ENST00000590215 LOC102724159A0A0B4J2E5 919 aa21.67■■□□□ 1.06
MBD1-223ENST00000590215 PTPDC1A2A3K4 754 aa21.67■■□□□ 1.06
MBD1-223ENST00000590215 CCDC85CA6NKD9 419 aa21.67■■□□□ 1.06
MBD1-223ENST00000590215 IFNAR1P17181 557 aa21.67■■□□□ 1.06
MBD1-223ENST00000590215 HSD17B4P51659 736 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms