RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 POTEB2H3BUK9 544 aa20.47■□□□□ 0.87
H3F3B-207ENST00000589417 SNAI1O95863 264 aaPredicted RBP20.47■□□□□ 0.87
H3F3B-207ENST00000589417 HMGB1P09429 215 aaKnown RBP20.47■□□□□ 0.87
H3F3B-207ENST00000589417 ZNF865P0CJ78 1059 aaPredicted RBP20.47■□□□□ 0.87
H3F3B-207ENST00000589417 SMARCA1P28370 1054 aa20.47■□□□□ 0.87
H3F3B-207ENST00000589417 PWP2Q15269 919 aaKnown RBP20.47■□□□□ 0.87
H3F3B-207ENST00000589417 CDC37Q16543 378 aaPredicted RBP20.47■□□□□ 0.87
H3F3B-207ENST00000589417 DHX32Q7L7V1 743 aaKnown RBP20.47■□□□□ 0.87
H3F3B-207ENST00000589417 FARP2O94887 1054 aaPredicted RBP20.46■□□□□ 0.87
H3F3B-207ENST00000589417 ZNF654Q8IZM8 581 aa20.46■□□□□ 0.87
H3F3B-207ENST00000589417 MORC4Q8TE76 937 aa20.46■□□□□ 0.87
H3F3B-207ENST00000589417 GPHNQ9NQX3 736 aaPredicted RBP20.46■□□□□ 0.87
H3F3B-207ENST00000589417 ZNFX1Q9P2E3 1918 aaKnown RBP20.45■□□□□ 0.86
H3F3B-207ENST00000589417 SOWAHBA6NEL2 793 aa20.45■□□□□ 0.86
H3F3B-207ENST00000589417 NFIBO00712 420 aa20.45■□□□□ 0.86
H3F3B-207ENST00000589417 CNTN2Q02246 1040 aa20.45■□□□□ 0.86
H3F3B-207ENST00000589417 SLC35G1Q2M3R5 365 aa20.45■□□□□ 0.86
H3F3B-207ENST00000589417 QRICH1Q2TAL8 776 aa20.45■□□□□ 0.86
H3F3B-207ENST00000589417 ADCK5Q3MIX3 580 aa20.45■□□□□ 0.86
H3F3B-207ENST00000589417 PRAMEF19Q5SWL8 479 aa20.45■□□□□ 0.86
H3F3B-207ENST00000589417 CNPY2Q9Y2B0 182 aa20.45■□□□□ 0.86
H3F3B-207ENST00000589417 ABCB11O95342 1321 aa20.45■□□□□ 0.86
H3F3B-207ENST00000589417 ASB14A6NK59 587 aa20.44■□□□□ 0.86
H3F3B-207ENST00000589417 ZBTB5O15062 677 aa20.44■□□□□ 0.86
H3F3B-207ENST00000589417 CALM1P0DP23 149 aa20.44■□□□□ 0.86
H3F3B-207ENST00000589417 CALM2P0DP24 149 aa20.44■□□□□ 0.86
H3F3B-207ENST00000589417 CALM3P0DP25 149 aa20.44■□□□□ 0.86
H3F3B-207ENST00000589417 BAATQ14032 418 aaPredicted RBP20.44■□□□□ 0.86
H3F3B-207ENST00000589417 FBXL16Q8N461 479 aa20.44■□□□□ 0.86
H3F3B-207ENST00000589417 LZTS2Q9BRK4 669 aa20.44■□□□□ 0.86
H3F3B-207ENST00000589417 USP26Q9BXU7 913 aa20.44■□□□□ 0.86
H3F3B-207ENST00000589417 ABHD16BQ9H3Z7 469 aa20.44■□□□□ 0.86
H3F3B-207ENST00000589417 SNX14Q9Y5W7 946 aa20.44■□□□□ 0.86
H3F3B-207ENST00000589417 CYTH3O43739 400 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 COL6A1P12109 1028 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 TAL1P17542 331 aaPredicted RBP20.43■□□□□ 0.86
H3F3B-207ENST00000589417 CNGA1P29973 690 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 KIF5BP33176 963 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 GNAQP50148 359 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 GHRHRQ02643 423 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 TRAF1Q13077 416 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 NSMFQ6X4W1 530 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 ARMCX2Q7L311 632 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 NECAB2Q7Z6G3 386 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 FBXO11Q86XK2 927 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 AMNQ9BXJ7 453 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 KATNBL1Q9H079 304 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 VAT1LQ9HCJ6 419 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.43■□□□□ 0.86
H3F3B-207ENST00000589417 ASTN1O14525 1302 aa20.43■□□□□ 0.86
H3F3B-207ENST00000589417 CCDC69A6NI79 296 aa20.42■□□□□ 0.86
H3F3B-207ENST00000589417 ACVR2BQ13705 512 aa20.42■□□□□ 0.86
H3F3B-207ENST00000589417 RNF207Q6ZRF8 634 aa20.42■□□□□ 0.86
H3F3B-207ENST00000589417 CCDC144CPQ8IYA2 1237 aa20.42■□□□□ 0.86
H3F3B-207ENST00000589417 SAMD3Q8N6K7 520 aa20.42■□□□□ 0.86
H3F3B-207ENST00000589417 CTCFLQ8NI51 663 aaPredicted RBP20.42■□□□□ 0.86
H3F3B-207ENST00000589417 PAWRQ96IZ0 340 aaKnown RBP20.42■□□□□ 0.86
H3F3B-207ENST00000589417 SPZ1Q9BXG8 430 aa20.42■□□□□ 0.86
H3F3B-207ENST00000589417 ADD3Q9UEY8 706 aaKnown RBP20.42■□□□□ 0.86
H3F3B-207ENST00000589417 MRPL11Q9Y3B7 192 aaKnown RBP20.42■□□□□ 0.86
H3F3B-207ENST00000589417 DHX16O60231 1041 aaKnown RBP20.41■□□□□ 0.86
H3F3B-207ENST00000589417 AKR1A1P14550 325 aa20.41■□□□□ 0.86
H3F3B-207ENST00000589417 RCAN1P53805 252 aa20.41■□□□□ 0.86
H3F3B-207ENST00000589417 RPS6P62753 249 aaKnown RBP20.41■□□□□ 0.86
H3F3B-207ENST00000589417 NFXL1Q6ZNB6 911 aa20.41■□□□□ 0.86
H3F3B-207ENST00000589417 MCF2L2Q86YR7 1114 aa20.41■□□□□ 0.86
H3F3B-207ENST00000589417 ARRDC4Q8NCT1 418 aa20.41■□□□□ 0.86
H3F3B-207ENST00000589417 DNERQ8NFT8 737 aa20.41■□□□□ 0.86
H3F3B-207ENST00000589417 HTATIP2Q9BUP3 242 aa20.41■□□□□ 0.86
H3F3B-207ENST00000589417 MAP3K20Q9NYL2 800 aaKnown RBP20.41■□□□□ 0.86
H3F3B-207ENST00000589417 SLC12A7Q9Y666 1083 aa20.41■□□□□ 0.86
H3F3B-207ENST00000589417 PDE4DIPQ5VU43 2346 aa20.41■□□□□ 0.86
H3F3B-207ENST00000589417 PNMA6FA0A0J9YX94 578 aa20.4■□□□□ 0.86
H3F3B-207ENST00000589417 DNM1LO00429 736 aa20.4■□□□□ 0.86
H3F3B-207ENST00000589417 PPP1R11O60927 126 aaPredicted RBP20.4■□□□□ 0.86
H3F3B-207ENST00000589417 USH1GQ495M9 461 aa20.4■□□□□ 0.86
H3F3B-207ENST00000589417 FANCBQ8NB91 859 aa20.4■□□□□ 0.86
H3F3B-207ENST00000589417 DIS3LQ8TF46 1054 aaKnown RBP20.4■□□□□ 0.86
H3F3B-207ENST00000589417 NUP133Q8WUM0 1156 aa20.4■□□□□ 0.86
H3F3B-207ENST00000589417 LRRC2Q9BYS8 371 aa20.4■□□□□ 0.86
H3F3B-207ENST00000589417 FAM184BQ9ULE4 1060 aa20.4■□□□□ 0.86
H3F3B-207ENST00000589417 PTPDC1A2A3K4 754 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 RARBP10826 455 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 EDNRBP24530 442 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 PSMA5P28066 241 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 NKX3-2P78367 333 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 SLC30A10Q6XR72 485 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 PIGSQ96S52 555 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 MYL10Q9BUA6 226 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 AGXT2Q9BYV1 514 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 C11orf49Q9H6J7 331 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 SMCHD1A6NHR9 2005 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 PLXNA1Q9UIW2 1896 aa20.39■□□□□ 0.85
H3F3B-207ENST00000589417 OPLAHO14841 1288 aa20.38■□□□□ 0.85
H3F3B-207ENST00000589417 EIF5BO60841 1220 aaKnown RBP20.38■□□□□ 0.85
H3F3B-207ENST00000589417 ALDH5A1P51649 535 aaPredicted RBP20.38■□□□□ 0.85
H3F3B-207ENST00000589417 APOA5Q6Q788 366 aa20.38■□□□□ 0.85
H3F3B-207ENST00000589417 JAKMIP1Q96N16 626 aaKnown RBP20.38■□□□□ 0.85
H3F3B-207ENST00000589417 PURBQ96QR8 312 aaKnown RBP20.38■□□□□ 0.85
H3F3B-207ENST00000589417 TM6SF1Q9BZW5 370 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms