RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 UBA5Q9GZZ9 404 aa17.79■□□□□ 0.44
ERCC1-209ENST00000589214 CYP39A1Q9NYL5 469 aa17.79■□□□□ 0.44
ERCC1-209ENST00000589214 SOWAHBA6NEL2 793 aa17.78■□□□□ 0.44
ERCC1-209ENST00000589214 NFIBO00712 420 aa17.78■□□□□ 0.44
ERCC1-209ENST00000589214 PGK1P00558 417 aa17.78■□□□□ 0.44
ERCC1-209ENST00000589214 COL9A3Q14050 684 aaPredicted RBP17.78■□□□□ 0.44
ERCC1-209ENST00000589214 SEC23AQ15436 765 aa17.78■□□□□ 0.44
ERCC1-209ENST00000589214 ASPRV1Q53RT3 343 aa17.78■□□□□ 0.44
ERCC1-209ENST00000589214 CCDC144CPQ8IYA2 1237 aa17.78■□□□□ 0.44
ERCC1-209ENST00000589214 PCDH10Q9P2E7 1040 aa17.78■□□□□ 0.44
ERCC1-209ENST00000589214 DDX49Q9Y6V7 483 aaKnown RBP17.78■□□□□ 0.44
ERCC1-209ENST00000589214 ASTN1O14525 1302 aa17.77■□□□□ 0.44
ERCC1-209ENST00000589214 WDR19Q8NEZ3 1342 aa17.77■□□□□ 0.44
ERCC1-209ENST00000589214 SYNRGQ9UMZ2 1314 aa17.77■□□□□ 0.44
ERCC1-209ENST00000589214 DHX16O60231 1041 aaKnown RBP17.77■□□□□ 0.44
ERCC1-209ENST00000589214 PARP1P09874 1014 aaKnown RBP17.77■□□□□ 0.44
ERCC1-209ENST00000589214 ACVR2BQ13705 512 aa17.77■□□□□ 0.44
ERCC1-209ENST00000589214 CDC37Q16543 378 aaPredicted RBP17.77■□□□□ 0.44
ERCC1-209ENST00000589214 USH1GQ495M9 461 aa17.77■□□□□ 0.44
ERCC1-209ENST00000589214 SLC30A10Q6XR72 485 aa17.77■□□□□ 0.44
ERCC1-209ENST00000589214 PURBQ96QR8 312 aaKnown RBP17.77■□□□□ 0.44
ERCC1-209ENST00000589214 SENP2Q9HC62 589 aa17.77■□□□□ 0.44
ERCC1-209ENST00000589214 FAM184BQ9ULE4 1060 aa17.77■□□□□ 0.44
ERCC1-209ENST00000589214 PTPDC1A2A3K4 754 aa17.76■□□□□ 0.43
ERCC1-209ENST00000589214 IFIT3O14879 490 aaKnown RBP17.76■□□□□ 0.43
ERCC1-209ENST00000589214 ADCYAP1R1P41586 468 aa17.76■□□□□ 0.43
ERCC1-209ENST00000589214 ANTXR2P58335 489 aa17.76■□□□□ 0.43
ERCC1-209ENST00000589214 RNF180Q86T96 592 aa17.76■□□□□ 0.43
ERCC1-209ENST00000589214 MB21D2Q8IYB1 491 aaPredicted RBP17.76■□□□□ 0.43
ERCC1-209ENST00000589214 FERMT2Q96AC1 680 aa17.76■□□□□ 0.43
ERCC1-209ENST00000589214 ABHD16BQ9H3Z7 469 aa17.76■□□□□ 0.43
ERCC1-209ENST00000589214 RBM27Q9P2N5 1060 aaKnown RBP17.76■□□□□ 0.43
ERCC1-209ENST00000589214 ERICH2A1L162 156 aa17.75■□□□□ 0.43
ERCC1-209ENST00000589214 ASB14A6NK59 587 aa17.75■□□□□ 0.43
ERCC1-209ENST00000589214 ADCY6O43306 1168 aa17.75■□□□□ 0.43
ERCC1-209ENST00000589214 ADAMTS4O75173 837 aa17.75■□□□□ 0.43
ERCC1-209ENST00000589214 RTP1P59025 263 aa17.75■□□□□ 0.43
ERCC1-209ENST00000589214 BAATQ14032 418 aaPredicted RBP17.75■□□□□ 0.43
ERCC1-209ENST00000589214 CCDC144BQ3MJ40 725 aa17.75■□□□□ 0.43
ERCC1-209ENST00000589214 ADGRF4Q8IZF3 695 aa17.75■□□□□ 0.43
ERCC1-209ENST00000589214 CLEC4DQ8WXI8 215 aa17.75■□□□□ 0.43
ERCC1-209ENST00000589214 KATNBL1Q9H079 304 aa17.75■□□□□ 0.43
ERCC1-209ENST00000589214 GPHNQ9NQX3 736 aaPredicted RBP17.75■□□□□ 0.43
ERCC1-209ENST00000589214 PNMA2Q9UL42 364 aa17.75■□□□□ 0.43
ERCC1-209ENST00000589214 MYH6P13533 1939 aa17.74■□□□□ 0.43
ERCC1-209ENST00000589214 CALML3P27482 149 aa17.74■□□□□ 0.43
ERCC1-209ENST00000589214 FBXO16Q8IX29 292 aaPredicted RBP17.74■□□□□ 0.43
ERCC1-209ENST00000589214 RASEFQ8IZ41 740 aa17.74■□□□□ 0.43
ERCC1-209ENST00000589214 STAG2Q8N3U4 1231 aa17.74■□□□□ 0.43
ERCC1-209ENST00000589214 PHF24Q9UPV7 400 aa17.74■□□□□ 0.43
ERCC1-209ENST00000589214 ATP11BQ9Y2G3 1177 aa17.74■□□□□ 0.43
ERCC1-209ENST00000589214 BAZ2BQ9UIF8 2168 aaKnown RBP17.74■□□□□ 0.43
ERCC1-209ENST00000589214 CEP290O15078 2479 aa17.74■□□□□ 0.43
ERCC1-209ENST00000589214 MYADML2A6NDP7 307 aa17.73■□□□□ 0.43
ERCC1-209ENST00000589214 DUSP11O75319 330 aaKnown RBP17.73■□□□□ 0.43
ERCC1-209ENST00000589214 SLC34A2O95436 690 aa17.73■□□□□ 0.43
ERCC1-209ENST00000589214 ALDH5A1P51649 535 aaPredicted RBP17.73■□□□□ 0.43
ERCC1-209ENST00000589214 WTAPQ15007 396 aa17.73■□□□□ 0.43
ERCC1-209ENST00000589214 SART3Q15020 963 aaKnown RBP17.73■□□□□ 0.43
ERCC1-209ENST00000589214 QRICH1Q2TAL8 776 aa17.73■□□□□ 0.43
ERCC1-209ENST00000589214 TMEM67Q5HYA8 995 aa17.73■□□□□ 0.43
ERCC1-209ENST00000589214 RNF207Q6ZRF8 634 aa17.73■□□□□ 0.43
ERCC1-209ENST00000589214 EEPD1Q7L9B9 569 aa17.73■□□□□ 0.43
ERCC1-209ENST00000589214 PRO3102Q9H379 93 aa17.73■□□□□ 0.43
ERCC1-209ENST00000589214 VAT1LQ9HCJ6 419 aa17.73■□□□□ 0.43
ERCC1-209ENST00000589214 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-209ENST00000589214 A0A1W2PQ45 241 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-209ENST00000589214 A0A1W2PQY0 241 aa17.72■□□□□ 0.43
ERCC1-209ENST00000589214 PRC1O43663 620 aa17.72■□□□□ 0.43
ERCC1-209ENST00000589214 C6orf222P0C671 652 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-209ENST00000589214 IRX5P78411 483 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-209ENST00000589214 TRIM60Q495X7 471 aa17.72■□□□□ 0.43
ERCC1-209ENST00000589214 RNF20Q5VTR2 975 aa17.72■□□□□ 0.43
ERCC1-209ENST00000589214 SLC39A5Q6ZMH5 540 aa17.72■□□□□ 0.43
ERCC1-209ENST00000589214 IGDCC4Q8TDY8 1250 aa17.72■□□□□ 0.43
ERCC1-209ENST00000589214 LRRC2Q9BYS8 371 aa17.72■□□□□ 0.43
ERCC1-209ENST00000589214 JMJD4Q9H9V9 463 aa17.72■□□□□ 0.43
ERCC1-209ENST00000589214 ADD3Q9UEY8 706 aaKnown RBP17.72■□□□□ 0.43
ERCC1-209ENST00000589214 ABCB11O95342 1321 aa17.72■□□□□ 0.43
ERCC1-209ENST00000589214 LTBP2Q14767 1821 aa17.71■□□□□ 0.43
ERCC1-209ENST00000589214 KLRF2D3W0D1 207 aa17.71■□□□□ 0.43
ERCC1-209ENST00000589214 MCM5P33992 734 aa17.71■□□□□ 0.43
ERCC1-209ENST00000589214 MAGEA10P43363 369 aaPredicted RBP17.71■□□□□ 0.43
ERCC1-209ENST00000589214 RPS6P62753 249 aaKnown RBP17.71■□□□□ 0.43
ERCC1-209ENST00000589214 GRM4Q14833 912 aa17.71■□□□□ 0.43
ERCC1-209ENST00000589214 ADCK5Q3MIX3 580 aa17.71■□□□□ 0.43
ERCC1-209ENST00000589214 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
ERCC1-209ENST00000589214 GDF15Q99988 308 aa17.71■□□□□ 0.43
ERCC1-209ENST00000589214 SPC25Q9HBM1 224 aa17.71■□□□□ 0.43
ERCC1-209ENST00000589214 MAD2L2Q9UI95 211 aa17.71■□□□□ 0.43
ERCC1-209ENST00000589214 PTGS1P23219 599 aa17.7■□□□□ 0.42
ERCC1-209ENST00000589214 FXR1P51114 621 aaKnown RBP eCLIP17.7■□□□□ 0.42
ERCC1-209ENST00000589214 ACLYP53396 1101 aa17.7■□□□□ 0.42
ERCC1-209ENST00000589214 TNFAIP2Q03169 654 aa17.7■□□□□ 0.42
ERCC1-209ENST00000589214 SNX17Q15036 470 aa17.7■□□□□ 0.42
ERCC1-209ENST00000589214 FBXO11Q86XK2 927 aa17.7■□□□□ 0.42
ERCC1-209ENST00000589214 KLHDC9Q8NEP7 349 aa17.7■□□□□ 0.42
ERCC1-209ENST00000589214 MORC4Q8TE76 937 aa17.7■□□□□ 0.42
ERCC1-209ENST00000589214 UPF3AQ9H1J1 476 aaKnown RBP17.7■□□□□ 0.42
ERCC1-209ENST00000589214 LY9Q9HBG7 655 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms