RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PPP6R2O75170 966 aa16.67■□□□□ 0.26
CCDC43-203ENST00000588210 EEF2P13639 858 aaKnown RBP16.67■□□□□ 0.26
CCDC43-203ENST00000588210 TPM4P67936 248 aa16.67■□□□□ 0.26
CCDC43-203ENST00000588210 CPLX2Q6PUV4 134 aaKnown RBP16.67■□□□□ 0.26
CCDC43-203ENST00000588210 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
CCDC43-203ENST00000588210 CLEC10AQ8IUN9 316 aa16.67■□□□□ 0.26
CCDC43-203ENST00000588210 CCAR2Q8N163 923 aaKnown RBP16.67■□□□□ 0.26
CCDC43-203ENST00000588210 CCDC150Q8NCX0 1101 aa16.67■□□□□ 0.26
CCDC43-203ENST00000588210 ESR2Q92731 530 aa16.67■□□□□ 0.26
CCDC43-203ENST00000588210 C12orf42Q96LP6 360 aa16.67■□□□□ 0.26
CCDC43-203ENST00000588210 CNNM2Q9H8M5 875 aa16.67■□□□□ 0.26
CCDC43-203ENST00000588210 MTMR4Q9NYA4 1195 aa16.67■□□□□ 0.26
CCDC43-203ENST00000588210 MYH6P13533 1939 aa16.67■□□□□ 0.26
CCDC43-203ENST00000588210 FAM237AA0A1B0GTK4 181 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 PDHXO00330 501 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 PABPC4Q13310 644 aaKnown RBP eCLIP16.66■□□□□ 0.262e-8■■■■□ 19.9
CCDC43-203ENST00000588210 PTPN14Q15678 1187 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 CEP95Q96GE4 821 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 KRT23Q9C075 422 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 HPSEQ9Y251 543 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 LOC285556D6RIA3 1793 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 NID2Q14112 1375 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 IKBKBO14920 756 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 FOXN1O15353 648 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 DGKZQ13574 1117 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 NCAPHQ15003 741 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
CCDC43-203ENST00000588210 TCP11L1Q9NUJ3 509 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 STK36Q9NRP7 1315 aa16.66■□□□□ 0.26
CCDC43-203ENST00000588210 KIF2AO00139 706 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-203ENST00000588210 TTLL1O95922 423 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 KCNJ6P48051 423 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 ATP2B2Q01814 1243 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 PTPAQ15257 358 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 ZYXQ15942 572 aaKnown RBP16.65■□□□□ 0.26
CCDC43-203ENST00000588210 TREML2Q5T2D2 321 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 KRT40Q6A162 431 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 SGMS1Q86VZ5 419 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 NKX2-3Q8TAU0 364 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 MKL1Q969V6 931 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 XPO4Q9C0E2 1151 aaKnown RBP16.65■□□□□ 0.26
CCDC43-203ENST00000588210 ZFYVE28Q9HCC9 887 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 TUBE1Q9UJT0 475 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 SYNPO2Q9UMS6 1093 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 TBC1D8O95759 1140 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 HOXA7P31268 230 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-203ENST00000588210 CTCFP49711 727 aaPredicted RBP16.65■□□□□ 0.26
CCDC43-203ENST00000588210 IL17RBQ9NRM6 502 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 IFNKQ9P0W0 207 aa16.65■□□□□ 0.26
CCDC43-203ENST00000588210 B4E1Z4 1266 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 ZBTB43O43298 467 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 SMC2O95347 1197 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 CDC27P30260 824 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 SYKP43405 635 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 CRHR2Q13324 411 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 NTRK3Q16288 839 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 LPAR1Q92633 364 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 AIFM3Q96NN9 605 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 VCPKMTQ9H867 229 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 GOPCQ9HD26 462 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 PNMA3Q9UL41 463 aa16.64■□□□□ 0.25
CCDC43-203ENST00000588210 U2AF2P26368 475 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCDC43-203ENST00000588210 NOVP48745 357 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 NOM1Q5C9Z4 860 aaKnown RBP16.63■□□□□ 0.25
CCDC43-203ENST00000588210 IGDCC4Q8TDY8 1250 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 PARK7Q99497 189 aaKnown RBP16.63■□□□□ 0.25
CCDC43-203ENST00000588210 MAP3K14Q99558 947 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 LY9Q9HBG7 655 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 CGNQ9P2M7 1197 aaKnown RBP16.63■□□□□ 0.25
CCDC43-203ENST00000588210 TSKSQ9UJT2 592 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 BIN1O00499 593 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 HSPA8P11142 646 aaKnown RBP16.63■□□□□ 0.25
CCDC43-203ENST00000588210 VCAM1P19320 739 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 OSBPP22059 807 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 LIFRP42702 1097 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 CCDC178Q5BJE1 867 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 RESP18Q5W5W9 173 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 SHC4Q6S5L8 630 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 TMC6Q7Z403 805 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 MICU3Q86XE3 530 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 IQCA1Q86XH1 822 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 ZNF592Q92610 1267 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 ZSWIM5Q9P217 1185 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 STX8Q9UNK0 236 aa16.63■□□□□ 0.25
CCDC43-203ENST00000588210 GOLGA8AA7E2F4 631 aa16.62■□□□□ 0.25
CCDC43-203ENST00000588210 NMT2O60551 498 aa16.62■□□□□ 0.25
CCDC43-203ENST00000588210 TLR2O60603 784 aa16.62■□□□□ 0.25
CCDC43-203ENST00000588210 MARCKSP29966 332 aaPredicted RBP16.62■□□□□ 0.25
CCDC43-203ENST00000588210 ARMCX5Q6P1M9 558 aa16.62■□□□□ 0.25
CCDC43-203ENST00000588210 SENP2Q9HC62 589 aa16.62■□□□□ 0.25
CCDC43-203ENST00000588210 USP17L15C9J2P7 530 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 USP17L13C9JLJ4 530 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 USP17L11C9JVI0 530 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 USP17L18D6R9N7 530 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 USP17L22D6RA61 530 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 USP17L17D6RBQ6 530 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 USP17L19D6RCP7 530 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 USP17L20D6RJB6 530 aa16.61■□□□□ 0.25
CCDC43-203ENST00000588210 CYP2C8P10632 490 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms