RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, human

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-206	ENST00000587509	MCF2L2	Q86YR7	1114 aa		13.65	□□□□□ -0.22
PRKCSH-206	ENST00000587509	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.65	□□□□□ -0.22
PRKCSH-206	ENST00000587509	XPNPEP3	Q9NQH7	507 aa		13.65	□□□□□ -0.22
PRKCSH-206	ENST00000587509	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.65	□□□□□ -0.22
PRKCSH-206	ENST00000587509	CYP39A1	Q9NYL5	469 aa		13.65	□□□□□ -0.22
PRKCSH-206	ENST00000587509	FRMPD3	Q5JV73	1810 aa		13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	KLRF2	D3W0D1	207 aa		13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	PRC1	O43663	620 aa		13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	MYCN	P04198	464 aa	Predicted RBP	13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SNAP25	P60880	206 aa		13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	USH1G	Q495M9	461 aa		13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SYNE3	Q6ZMZ3	975 aa		13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	RNF207	Q6ZRF8	634 aa		13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	FBXO11	Q86XK2	927 aa		13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	ADGRF4	Q8IZF3	695 aa		13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	FAM133A	Q8N9E0	248 aa		13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	MAP3K14	Q99558	947 aa		13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	MRPL11	Q9Y3B7	192 aa	Known RBP	13.64	□□□□□ -0.23
PRKCSH-206	ENST00000587509	MKI67	P46013	3256 aa	Known RBP	13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	GNAQ	P50148	359 aa		13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	ACVR2B	Q13705	512 aa		13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	GRM4	Q14833	912 aa		13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	MUM1L1	Q5H9M0	696 aa		13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	STOX1	Q6ZVD7	989 aa		13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	CCDC144CP	Q8IYA2	1237 aa		13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	TRPV1	Q8NER1	839 aa		13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	DIS3L	Q8TF46	1054 aa	Known RBP	13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	LZTS2	Q9BRK4	669 aa		13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	AMN	Q9BXJ7	453 aa		13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	UBA5	Q9GZZ9	404 aa		13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	VTA1	Q9NP79	307 aa		13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SEC63	Q9UGP8	760 aa	Known RBP	13.63	□□□□□ -0.23
PRKCSH-206	ENST00000587509	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	NFIB	O00712	420 aa		13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	ZBTB5	O15062	677 aa		13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	EPB41L2	O43491	1005 aa	Known RBP	13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	CALML3	P27482	149 aa		13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	FGD1	P98174	961 aa		13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	NECTIN1	Q15223	517 aa		13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	QRICH1	Q2TAL8	776 aa		13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SKAP1	Q86WV1	359 aa		13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	RGS22	Q8NE09	1264 aa		13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	DNER	Q8NFT8	737 aa		13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	NUP133	Q8WUM0	1156 aa		13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SLC12A7	Q9Y666	1083 aa		13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	TNRC18	O15417	2968 aa	Predicted RBP	13.62	□□□□□ -0.23
PRKCSH-206	ENST00000587509	CEP290	O15078	2479 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	PALM3	A6NDB9	673 aa	Predicted RBP	13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SH2B2	O14492	632 aa	Predicted RBP	13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	DUSP11	O75319	330 aa	Known RBP	13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	COL6A1	P12109	1028 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	LIFR	P42702	1097 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	CNTN2	Q02246	1040 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	TROAP	Q12815	778 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	BAAT	Q14032	418 aa	Predicted RBP	13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	PRAMEF19	Q5SWL8	479 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	NOL8	Q76FK4	1167 aa	Known RBP	13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	CHST3	Q7LGC8	479 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	ZNF654	Q8IZM8	581 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SAMD3	Q8N6K7	520 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	PCSK9	Q8NBP7	692 aa	Known RBP	13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	NEK1	Q96PY6	1258 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	LY9	Q9HBG7	655 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	PRKAG2	Q9UGJ0	569 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	MAD2L2	Q9UI95	211 aa		13.61	□□□□□ -0.23
PRKCSH-206	ENST00000587509	MOXD2P	A6NHM9	499 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	ZEB2	O60315	1214 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SNAI1	O95863	264 aa	Predicted RBP	13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	PSMA5	P28066	241 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	ALDH5A1	P51649	535 aa	Predicted RBP	13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	ANTXR2	P58335	489 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	RPS6	P62753	249 aa	Known RBP	13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	PDE4D	Q08499	809 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	LRRC41	Q15345	812 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	ANO1	Q5XXA6	986 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SLC30A10	Q6XR72	485 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	HOMER1	Q86YM7	354 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	C7orf61	Q8IZ16	206 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	IGDCC4	Q8TDY8	1250 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	RRP36	Q96EU6	259 aa	Known RBP	13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	TSEN34	Q9BSV6	310 aa	Known RBP	13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	JMJD4	Q9H9V9	463 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	VAT1L	Q9HCJ6	419 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	MAP3K20	Q9NYL2	800 aa	Known RBP	13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	TAF6L	Q9Y6J9	622 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SYNRG	Q9UMZ2	1314 aa		13.6	□□□□□ -0.23
PRKCSH-206	ENST00000587509		H0YGN5	161 aa		13.59	□□□□□ -0.23
PRKCSH-206	ENST00000587509	CST5	P28325	142 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SMARCA1	P28370	1054 aa		13.59	□□□□□ -0.23
PRKCSH-206	ENST00000587509	CCDC144B	Q3MJ40	725 aa		13.59	□□□□□ -0.23
PRKCSH-206	ENST00000587509	TSGA10IP	Q3SY00	556 aa		13.59	□□□□□ -0.23
PRKCSH-206	ENST00000587509	BRDT	Q58F21	947 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-206	ENST00000587509	GJC2	Q5T442	439 aa	Predicted RBP	13.59	□□□□□ -0.23
PRKCSH-206	ENST00000587509	STAG2	Q8N3U4	1231 aa		13.59	□□□□□ -0.23
PRKCSH-206	ENST00000587509	CLEC4D	Q8WXI8	215 aa		13.59	□□□□□ -0.23
PRKCSH-206	ENST00000587509	FGD4	Q96M96	766 aa		13.59	□□□□□ -0.23
PRKCSH-206	ENST00000587509	SPZ1	Q9BXG8	430 aa		13.59	□□□□□ -0.23
PRKCSH-206	ENST00000587509	AP5M1	Q9H0R1	490 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms