RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.13□□□□□ -0.47
SMARCA4-209ENST00000586122 LCTP09848 1927 aa12.13□□□□□ -0.47
SMARCA4-209ENST00000586122 ALPK3Q96L96 1907 aa12.13□□□□□ -0.47
SMARCA4-209ENST00000586122 PALM3A6NDB9 673 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 B4DLN1 442 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 KLRF2D3W0D1 207 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 PRC1O43663 620 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 DHX16O60231 1041 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 DDAH1O94760 285 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 SNAI1O95863 264 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 ZNF865P0CJ78 1059 aaPredicted RBP12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 KIF5BP33176 963 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 LIFRP42702 1097 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 MRPL12P52815 198 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 SNAP25P60880 206 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 TROAPQ12815 778 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 MUM1L1Q5H9M0 696 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 NSMFQ6X4W1 530 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 RNF207Q6ZRF8 634 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 ARMCX2Q7L311 632 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 ADGRF4Q8IZF3 695 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 IGDCC4Q8TDY8 1250 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 DIS3LQ8TF46 1054 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 FGD4Q96M96 766 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 UBA5Q9GZZ9 404 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 FAM184BQ9ULE4 1060 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 TAF6LQ9Y6J9 622 aa12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 BAZ2BQ9UIF8 2168 aaKnown RBP12.12□□□□□ -0.47
SMARCA4-209ENST00000586122 KBTBD13C9JR72 458 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 EVI5O60447 810 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 HMGB1P09429 215 aaKnown RBP12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 CALM1P0DP23 149 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 CALM2P0DP24 149 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 CALM3P0DP25 149 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 SMARCA1P28370 1054 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 GNAQP50148 359 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 ANTXR2P58335 489 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 ACVR2BQ13705 512 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 PRAMEF19Q5SWL8 479 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 RNF180Q86T96 592 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 FBXO11Q86XK2 927 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 MCF2L2Q86YR7 1114 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 CCDC144CPQ8IYA2 1237 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 SAMD3Q8N6K7 520 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 DNERQ8NFT8 737 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 CTCFLQ8NI51 663 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 MORC4Q8TE76 937 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 CLEC4DQ8WXI8 215 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 MTMR8Q96EF0 704 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 LZTS2Q9BRK4 669 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 AMNQ9BXJ7 453 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 JMJD4Q9H9V9 463 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 XPNPEP3Q9NQH7 507 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 MAD2L2Q9UI95 211 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 ZHX1Q9UKY1 873 aaPredicted RBP12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 MRPL11Q9Y3B7 192 aaKnown RBP12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 LRRC37A2A6NM11 1700 aa12.11□□□□□ -0.47
SMARCA4-209ENST00000586122 PTPDC1A2A3K4 754 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 NFIBO00712 420 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 SH2B2O14492 632 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 ZBTB5O15062 677 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 DUSP11O75319 330 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 CNTN2Q02246 1040 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 BAATQ14032 418 aaPredicted RBP12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 QRICH1Q2TAL8 776 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 ZNF654Q8IZM8 581 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 NEK1Q96PY6 1258 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 TSEN34Q9BSV6 310 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 RIOX1Q9H6W3 641 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 LY9Q9HBG7 655 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 SPC25Q9HBM1 224 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 VTA1Q9NP79 307 aa12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 MAP3K20Q9NYL2 800 aaKnown RBP12.1□□□□□ -0.47
SMARCA4-209ENST00000586122 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 EIF5BO60841 1220 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 TAL1P17542 331 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 ALDH5A1P51649 535 aaPredicted RBP12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 RPS6P62753 249 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 LRRC41Q15345 812 aa12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 CCDC144BQ3MJ40 725 aa12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 USH1GQ495M9 461 aa12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 NFXL1Q6ZNB6 911 aa12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 DHX32Q7L7V1 743 aaKnown RBP12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 CHST3Q7LGC8 479 aa12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 SGMS1Q86VZ5 419 aa12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 STAG2Q8N3U4 1231 aa12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 SPZ1Q9BXG8 430 aa12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 KATNBL1Q9H079 304 aa12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 CPVLQ9H3G5 476 aa12.09□□□□□ -0.47
SMARCA4-209ENST00000586122 H0YGN5 161 aa12.08□□□□□ -0.48
SMARCA4-209ENST00000586122 CALML3P27482 149 aa12.08□□□□□ -0.48
SMARCA4-209ENST00000586122 CST5P28325 142 aaPredicted RBP12.08□□□□□ -0.48
SMARCA4-209ENST00000586122 HSPA4P34932 840 aa12.08□□□□□ -0.48
SMARCA4-209ENST00000586122 NKX3-2P78367 333 aa12.08□□□□□ -0.48
SMARCA4-209ENST00000586122 GHRHRQ02643 423 aa12.08□□□□□ -0.48
SMARCA4-209ENST00000586122 SYNE3Q6ZMZ3 975 aa12.08□□□□□ -0.48
SMARCA4-209ENST00000586122 PCSK9Q8NBP7 692 aaKnown RBP12.08□□□□□ -0.48
SMARCA4-209ENST00000586122 NUP133Q8WUM0 1156 aa12.08□□□□□ -0.48
SMARCA4-209ENST00000586122 KCNB2Q92953 911 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms