RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 MPHOSPH6Q99547 160 aaKnown RBP14.46□□□□□ -0.09
SS18-225ENST00000585121 TSEN34Q9BSV6 310 aaKnown RBP14.46□□□□□ -0.09
SS18-225ENST00000585121 UBA5Q9GZZ9 404 aa14.46□□□□□ -0.09
SS18-225ENST00000585121 ATP11BQ9Y2G3 1177 aa14.46□□□□□ -0.09
SS18-225ENST00000585121 TRIOBPQ9H2D6 2365 aa14.46□□□□□ -0.09
SS18-225ENST00000585121 A0A1W2PPC1 479 aa14.46□□□□□ -0.1
SS18-225ENST00000585121 IFIT3O14879 490 aaKnown RBP14.46□□□□□ -0.1
SS18-225ENST00000585121 BAATQ14032 418 aaPredicted RBP14.46□□□□□ -0.1
SS18-225ENST00000585121 CCDC144BQ3MJ40 725 aa14.46□□□□□ -0.1
SS18-225ENST00000585121 PHF24Q9UPV7 400 aa14.46□□□□□ -0.1
SS18-225ENST00000585121 MOXD2PA6NHM9 499 aa14.45□□□□□ -0.1
SS18-225ENST00000585121 B4DLN1 442 aa14.45□□□□□ -0.1
SS18-225ENST00000585121 E7EWF7 191 aa14.45□□□□□ -0.1
SS18-225ENST00000585121 NFIBO00712 420 aa14.45□□□□□ -0.1
SS18-225ENST00000585121 MRPL12P52815 198 aaKnown RBP14.45□□□□□ -0.1
SS18-225ENST00000585121 CDC37Q16543 378 aaPredicted RBP14.45□□□□□ -0.1
SS18-225ENST00000585121 CASC1Q6TDU7 716 aa14.45□□□□□ -0.1
SS18-225ENST00000585121 RNF207Q6ZRF8 634 aa14.45□□□□□ -0.1
SS18-225ENST00000585121 CYB5R4Q7L1T6 521 aa14.45□□□□□ -0.1
SS18-225ENST00000585121 ADGRF4Q8IZF3 695 aa14.45□□□□□ -0.1
SS18-225ENST00000585121 NUP133Q8WUM0 1156 aa14.45□□□□□ -0.1
SS18-225ENST00000585121 LENG1Q96BZ8 264 aaPredicted RBP14.45□□□□□ -0.1
SS18-225ENST00000585121 LBHD1Q9BQE6 289 aaPredicted RBP14.45□□□□□ -0.1
SS18-225ENST00000585121 PRO3102Q9H379 93 aa14.45□□□□□ -0.1
SS18-225ENST00000585121 RBM8AQ9Y5S9 174 aaKnown RBP14.45□□□□□ -0.1
SS18-225ENST00000585121 PLXNA1Q9UIW2 1896 aa14.45□□□□□ -0.1
SS18-225ENST00000585121 LAMA4Q16363 1823 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 SYNRGQ9UMZ2 1314 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 LOC102724159A0A0B4J2E5 919 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 ADAMTS4O75173 837 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 C6orf222P0C671 652 aaPredicted RBP14.44□□□□□ -0.1
SS18-225ENST00000585121 CALML3P27482 149 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 BMP8BP34820 402 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 MAGEA10P43363 369 aaPredicted RBP14.44□□□□□ -0.1
SS18-225ENST00000585121 TNFAIP2Q03169 654 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 WTAPQ15007 396 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 PWP2Q15269 919 aaKnown RBP14.44□□□□□ -0.1
SS18-225ENST00000585121 USH1GQ495M9 461 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 BMP2KLQ5H9B9 411 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 PCSK9Q8NBP7 692 aaKnown RBP14.44□□□□□ -0.1
SS18-225ENST00000585121 CCDC136Q96JN2 1154 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 GDF15Q99988 308 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 MAF1Q9H063 256 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 VAT1LQ9HCJ6 419 aa14.44□□□□□ -0.1
SS18-225ENST00000585121 ABCB11O95342 1321 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 A0A1W2PQ45 241 aaPredicted RBP14.43□□□□□ -0.1
SS18-225ENST00000585121 A0A1W2PQY0 241 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 NEFLP07196 543 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 FXR1P51114 621 aaKnown RBP eCLIP14.43□□□□□ -0.1
SS18-225ENST00000585121 GJA9P57773 515 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 SEC23AQ15436 765 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 KCNA10Q16322 511 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 C1orf53Q5VUE5 145 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 IQSEC1Q6DN90 963 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 RGS22Q8NE09 1264 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 CLEC4DQ8WXI8 215 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 VTI1AQ96AJ9 217 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 ESYT1Q9BSJ8 1104 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 UBE2OQ9C0C9 1292 aaKnown RBP14.43□□□□□ -0.1
SS18-225ENST00000585121 AP5M1Q9H0R1 490 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 CPVLQ9H3G5 476 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 VTA1Q9NP79 307 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 GTF3C3Q9Y5Q9 886 aa14.43□□□□□ -0.1
SS18-225ENST00000585121 SMCHD1A6NHR9 2005 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 KLRF2D3W0D1 207 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 ALDH5A1P51649 535 aaPredicted RBP14.42□□□□□ -0.1
SS18-225ENST00000585121 ACLYP53396 1101 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 RPS6P62753 249 aaKnown RBP14.42□□□□□ -0.1
SS18-225ENST00000585121 TRIM60Q495X7 471 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 TMEM67Q5HYA8 995 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 GNASQ5JWF2 1037 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 EEPD1Q7L9B9 569 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 CATIPQ7Z7H3 387 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 FBXO11Q86XK2 927 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 MCF2L2Q86YR7 1114 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 KLHDC9Q8NEP7 349 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 DNERQ8NFT8 737 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 GLT1D1Q96MS3 346 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 KATNBL1Q9H079 304 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 ANO2Q9NQ90 1003 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 PRDM5Q9NQX1 630 aaPredicted RBP14.42□□□□□ -0.1
SS18-225ENST00000585121 STARD7Q9NQZ5 370 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 MRPL11Q9Y3B7 192 aaKnown RBP14.42□□□□□ -0.1
SS18-225ENST00000585121 FRMPD3Q5JV73 1810 aa14.42□□□□□ -0.1
SS18-225ENST00000585121 RANBP2P49792 3224 aaKnown RBP14.42□□□□□ -0.1
SS18-225ENST00000585121 ZEB2O60315 1214 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 CST5P28325 142 aaPredicted RBP14.41□□□□□ -0.1
SS18-225ENST00000585121 PDE4DQ08499 809 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 TRAF1Q13077 416 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 SNX17Q15036 470 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 SLC30A10Q6XR72 485 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 MORC4Q8TE76 937 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 PURBQ96QR8 312 aaKnown RBP14.41□□□□□ -0.1
SS18-225ENST00000585121 LSG1Q9H089 658 aaKnown RBP14.41□□□□□ -0.1
SS18-225ENST00000585121 UPF3AQ9H1J1 476 aaKnown RBP14.41□□□□□ -0.1
SS18-225ENST00000585121 JMJD4Q9H9V9 463 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 ALPK3Q96L96 1907 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 DNAH12Q6ZR08 3092 aa14.41□□□□□ -0.1
SS18-225ENST00000585121 MDM2Q00987 491 aaPredicted RBP14.41□□□□□ -0.1
SS18-225ENST00000585121 TLE2Q04725 743 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms