RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 CYP21A2P08686 494 aa21.14■□□□□ 0.97
SRSF1-208ENST00000584773 KAT14Q9H8E8 782 aa21.14■□□□□ 0.97
SRSF1-208ENST00000584773 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.13■□□□□ 0.97
SRSF1-208ENST00000584773 MDM2Q00987 491 aaPredicted RBP21.13■□□□□ 0.97
SRSF1-208ENST00000584773 CCDC144BQ3MJ40 725 aa21.13■□□□□ 0.97
SRSF1-208ENST00000584773 TRIM60Q495X7 471 aa21.13■□□□□ 0.97
SRSF1-208ENST00000584773 RUFY2Q8WXA3 655 aa21.13■□□□□ 0.97
SRSF1-208ENST00000584773 ANKS1AQ92625 1134 aa21.13■□□□□ 0.97
SRSF1-208ENST00000584773 KRT23Q9C075 422 aa21.13■□□□□ 0.97
SRSF1-208ENST00000584773 PHF24Q9UPV7 400 aa21.13■□□□□ 0.97
SRSF1-208ENST00000584773 BAATQ14032 418 aaPredicted RBP21.12■□□□□ 0.97
SRSF1-208ENST00000584773 SLC30A10Q6XR72 485 aa21.12■□□□□ 0.97
SRSF1-208ENST00000584773 EEPD1Q7L9B9 569 aa21.12■□□□□ 0.97
SRSF1-208ENST00000584773 RNF180Q86T96 592 aa21.12■□□□□ 0.97
SRSF1-208ENST00000584773 CLEC4DQ8WXI8 215 aa21.12■□□□□ 0.97
SRSF1-208ENST00000584773 ABHD16BQ9H3Z7 469 aa21.12■□□□□ 0.97
SRSF1-208ENST00000584773 SOX1O00570 391 aaPredicted RBP21.11■□□□□ 0.97
SRSF1-208ENST00000584773 USH1GQ495M9 461 aa21.11■□□□□ 0.97
SRSF1-208ENST00000584773 STOX1Q6ZVD7 989 aa21.11■□□□□ 0.97
SRSF1-208ENST00000584773 UBAC1Q9BSL1 405 aa21.11■□□□□ 0.97
SRSF1-208ENST00000584773 CNNM2Q9H8M5 875 aa21.11■□□□□ 0.97
SRSF1-208ENST00000584773 LTBP2Q14767 1821 aa21.11■□□□□ 0.97
SRSF1-208ENST00000584773 A0A1W2PQ45 241 aaPredicted RBP21.1■□□□□ 0.97
SRSF1-208ENST00000584773 A0A1W2PQY0 241 aa21.1■□□□□ 0.97
SRSF1-208ENST00000584773 SNX17Q15036 470 aa21.1■□□□□ 0.97
SRSF1-208ENST00000584773 SEC23AQ15436 765 aa21.1■□□□□ 0.97
SRSF1-208ENST00000584773 CCDC178Q5BJE1 867 aa21.1■□□□□ 0.97
SRSF1-208ENST00000584773 TMEM63BQ5T3F8 832 aa21.1■□□□□ 0.97
SRSF1-208ENST00000584773 GPATCH4Q5T3I0 446 aaKnown RBP21.1■□□□□ 0.97
SRSF1-208ENST00000584773 FBXO16Q8IX29 292 aaPredicted RBP21.1■□□□□ 0.97
SRSF1-208ENST00000584773 KLHDC9Q8NEP7 349 aa21.1■□□□□ 0.97
SRSF1-208ENST00000584773 SENP2Q9HC62 589 aa21.1■□□□□ 0.97
SRSF1-208ENST00000584773 PDGFCQ9NRA1 345 aa21.1■□□□□ 0.97
SRSF1-208ENST00000584773 MYH6P13533 1939 aa21.1■□□□□ 0.97
SRSF1-208ENST00000584773 PTPDC1A2A3K4 754 aa21.09■□□□□ 0.97
SRSF1-208ENST00000584773 DUSP11O75319 330 aaKnown RBP21.09■□□□□ 0.97
SRSF1-208ENST00000584773 CALML3P27482 149 aa21.09■□□□□ 0.97
SRSF1-208ENST00000584773 CDC37Q16543 378 aaPredicted RBP21.09■□□□□ 0.97
SRSF1-208ENST00000584773 IFIT1BQ5T764 474 aaKnown RBP21.09■□□□□ 0.97
SRSF1-208ENST00000584773 CCSAPQ6IQ19 270 aaPredicted RBP21.09■□□□□ 0.97
SRSF1-208ENST00000584773 CHST3Q7LGC8 479 aa21.09■□□□□ 0.97
SRSF1-208ENST00000584773 SH3RF1Q7Z6J0 888 aa21.09■□□□□ 0.97
SRSF1-208ENST00000584773 ADGRF4Q8IZF3 695 aa21.09■□□□□ 0.97
SRSF1-208ENST00000584773 STAG2Q8N3U4 1231 aa21.09■□□□□ 0.97
SRSF1-208ENST00000584773 PRDM5Q9NQX1 630 aaPredicted RBP21.09■□□□□ 0.97
SRSF1-208ENST00000584773 U3KPZ7 1027 aaPredicted RBP21.09■□□□□ 0.97
SRSF1-208ENST00000584773 ASB14A6NK59 587 aa21.08■□□□□ 0.97
SRSF1-208ENST00000584773 E7EWF7 191 aa21.08■□□□□ 0.97
SRSF1-208ENST00000584773 C6orf222P0C671 652 aaPredicted RBP21.08■□□□□ 0.97
SRSF1-208ENST00000584773 BMP8BP34820 402 aa21.08■□□□□ 0.97
SRSF1-208ENST00000584773 NT5C2P49902 561 aa21.08■□□□□ 0.97
SRSF1-208ENST00000584773 ACLYP53396 1101 aa21.08■□□□□ 0.97
SRSF1-208ENST00000584773 KCNA10Q16322 511 aa21.08■□□□□ 0.97
SRSF1-208ENST00000584773 RBM8AQ9Y5S9 174 aaKnown RBP21.08■□□□□ 0.97
SRSF1-208ENST00000584773 WDR19Q8NEZ3 1342 aa21.07■□□□□ 0.96
SRSF1-208ENST00000584773 CTAGE5O15320 804 aa21.07■□□□□ 0.96
SRSF1-208ENST00000584773 ALDH5A1P51649 535 aaPredicted RBP21.07■□□□□ 0.96
SRSF1-208ENST00000584773 BEX3Q00994 111 aa21.07■□□□□ 0.96
SRSF1-208ENST00000584773 ASPRV1Q53RT3 343 aa21.07■□□□□ 0.96
SRSF1-208ENST00000584773 LRCH3Q96II8 777 aa21.07■□□□□ 0.96
SRSF1-208ENST00000584773 UBE2OQ9C0C9 1292 aaKnown RBP21.07■□□□□ 0.96
SRSF1-208ENST00000584773 VAT1LQ9HCJ6 419 aa21.07■□□□□ 0.96
SRSF1-208ENST00000584773 PDLIM7Q9NR12 457 aa21.07■□□□□ 0.96
SRSF1-208ENST00000584773 PARP1P09874 1014 aaKnown RBP21.06■□□□□ 0.96
SRSF1-208ENST00000584773 RPS6P62753 249 aaKnown RBP21.06■□□□□ 0.96
SRSF1-208ENST00000584773 TNFAIP2Q03169 654 aa21.06■□□□□ 0.96
SRSF1-208ENST00000584773 TLE2Q04725 743 aa21.06■□□□□ 0.96
SRSF1-208ENST00000584773 COL9A3Q14050 684 aaPredicted RBP21.06■□□□□ 0.96
SRSF1-208ENST00000584773 TAPT1Q6NXT6 567 aa21.06■□□□□ 0.96
SRSF1-208ENST00000584773 RNF207Q6ZRF8 634 aa21.06■□□□□ 0.96
SRSF1-208ENST00000584773 NOL8Q76FK4 1167 aaKnown RBP21.06■□□□□ 0.96
SRSF1-208ENST00000584773 TBC1D5Q92609 795 aa21.06■□□□□ 0.96
SRSF1-208ENST00000584773 MAP4K1Q92918 833 aa21.06■□□□□ 0.96
SRSF1-208ENST00000584773 UPF3AQ9H1J1 476 aaKnown RBP21.06■□□□□ 0.96
SRSF1-208ENST00000584773 A0A1W2PPC1 479 aa21.05■□□□□ 0.96
SRSF1-208ENST00000584773 TRIM43BA6NCK2 446 aa21.05■□□□□ 0.96
SRSF1-208ENST00000584773 DHX16O60231 1041 aaKnown RBP21.05■□□□□ 0.96
SRSF1-208ENST00000584773 SMPD1P17405 629 aa21.05■□□□□ 0.96
SRSF1-208ENST00000584773 GJA9P57773 515 aa21.05■□□□□ 0.96
SRSF1-208ENST00000584773 ANTXR2P58335 489 aa21.05■□□□□ 0.96
SRSF1-208ENST00000584773 TRDNQ13061 729 aa21.05■□□□□ 0.96
SRSF1-208ENST00000584773 QRICH1Q2TAL8 776 aa21.05■□□□□ 0.96
SRSF1-208ENST00000584773 CENPQQ7L2Z9 268 aaPredicted RBP21.05■□□□□ 0.96
SRSF1-208ENST00000584773 TRIM43Q96BQ3 446 aaPredicted RBP21.05■□□□□ 0.96
SRSF1-208ENST00000584773 TSEN34Q9BSV6 310 aaKnown RBP21.05■□□□□ 0.96
SRSF1-208ENST00000584773 LSG1Q9H089 658 aaKnown RBP21.05■□□□□ 0.96
SRSF1-208ENST00000584773 JMJD4Q9H9V9 463 aa21.05■□□□□ 0.96
SRSF1-208ENST00000584773 STARD7Q9NQZ5 370 aa21.05■□□□□ 0.96
SRSF1-208ENST00000584773 IFIT3O14879 490 aaKnown RBP21.04■□□□□ 0.96
SRSF1-208ENST00000584773 PQBP1O60828 265 aaKnown RBP21.04■□□□□ 0.96
SRSF1-208ENST00000584773 ASGR1P07306 291 aa21.04■□□□□ 0.96
SRSF1-208ENST00000584773 CST5P28325 142 aaPredicted RBP21.04■□□□□ 0.96
SRSF1-208ENST00000584773 SLC35G1Q2M3R5 365 aa21.04■□□□□ 0.96
SRSF1-208ENST00000584773 MORC4Q8TE76 937 aa21.04■□□□□ 0.96
SRSF1-208ENST00000584773 ESYT1Q9BSJ8 1104 aa21.04■□□□□ 0.96
SRSF1-208ENST00000584773 PRKAG2Q9UGJ0 569 aa21.04■□□□□ 0.96
SRSF1-208ENST00000584773 MAD2L2Q9UI95 211 aa21.04■□□□□ 0.96
SRSF1-208ENST00000584773 GNEQ9Y223 722 aaKnown RBP21.04■□□□□ 0.96
SRSF1-208ENST00000584773 BAZ2BQ9UIF8 2168 aaKnown RBP21.04■□□□□ 0.96
SRSF1-208ENST00000584773 ITGB8P26012 769 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms