RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 PGK1P00558 417 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 MYOGP15173 224 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 FOXK2Q01167 660 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 KRT32Q14532 448 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 TSGA10IPQ3SY00 556 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 OLFML2BQ68BL8 750 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 RNF180Q86T96 592 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 LCORLQ8N3X6 602 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 TMEM199Q8N511 208 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 PPP1R12CQ9BZL4 782 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 PUS7LQ9H0K6 701 aaKnown RBP11.46□□□□□ -0.57
MKS1-212ENST00000583577 DHX36Q9H2U1 1008 aaKnown RBP11.46□□□□□ -0.57
MKS1-212ENST00000583577 ZSWIM6Q9HCJ5 1215 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 USP25Q9UHP3 1055 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 PALD1Q9ULE6 856 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 CYP46A1Q9Y6A2 500 aa11.46□□□□□ -0.57
MKS1-212ENST00000583577 F13A1P00488 732 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 IGHA2P01877 340 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 CHGBP05060 677 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 HLA-DOAP06340 250 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 RARBP10826 455 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 GNAT2P19087 354 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 ADORA2AP29274 412 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 SSTR3P32745 418 aaPredicted RBP11.45□□□□□ -0.58
MKS1-212ENST00000583577 ZMYM1Q5SVZ6 1142 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 ANKRD33Q7Z3H0 272 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 OSBP2Q969R2 916 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 PRIMPOLQ96LW4 560 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 TOX2Q96NM4 488 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 TRIM34Q9BYJ4 488 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 KCNH6Q9H252 994 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 MTIF3Q9H2K0 278 aaKnown RBP11.45□□□□□ -0.58
MKS1-212ENST00000583577 CERS4Q9HA82 394 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 STARD7Q9NQZ5 370 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 TBX21Q9UL17 535 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 SLC4A4Q9Y6R1 1079 aa11.45□□□□□ -0.58
MKS1-212ENST00000583577 ZNF236Q9UL36 1845 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 GOLGA6L6A8MZA4 724 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 GPAA1O43292 621 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 ASNSP08243 561 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 ALADP13716 330 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 JAG1P78504 1218 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 ZYXQ15942 572 aaKnown RBP11.44□□□□□ -0.58
MKS1-212ENST00000583577 SHROOM1Q2M3G4 852 aaPredicted RBP11.44□□□□□ -0.58
MKS1-212ENST00000583577 SASS6Q6UVJ0 657 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 TTC6Q86TZ1 520 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 AMOTL1Q8IY63 956 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 GJD3Q8N144 294 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 SDR42E1Q8WUS8 393 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 ANKS1AQ92625 1134 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 STRBPQ96SI9 672 aaKnown RBP11.44□□□□□ -0.58
MKS1-212ENST00000583577 HELLSQ9NRZ9 838 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 ATP8A2Q9NTI2 1148 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 BTBD7Q9P203 1132 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 PI4KBQ9UBF8 816 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 SAP30BPQ9UHR5 308 aaKnown RBP11.44□□□□□ -0.58
MKS1-212ENST00000583577 DCHS1Q96JQ0 3298 aa11.44□□□□□ -0.58
MKS1-212ENST00000583577 MYO15AQ9UKN7 3530 aa11.43□□□□□ -0.58
MKS1-212ENST00000583577 M0R2C6 588 aa11.43□□□□□ -0.58
MKS1-212ENST00000583577 GDF11O95390 407 aa11.43□□□□□ -0.58
MKS1-212ENST00000583577 FGBP02675 491 aa11.43□□□□□ -0.58
MKS1-212ENST00000583577 POLR3DP05423 398 aaPredicted RBP11.43□□□□□ -0.58
MKS1-212ENST00000583577 AK2P54819 239 aa11.43□□□□□ -0.58
MKS1-212ENST00000583577 USP17L2Q6R6M4 530 aa11.43□□□□□ -0.58
MKS1-212ENST00000583577 RUFY3Q7L099 469 aa11.43□□□□□ -0.58
MKS1-212ENST00000583577 OTOP2Q7RTS6 562 aa11.43□□□□□ -0.58
MKS1-212ENST00000583577 CRACR2BQ8N4Y2 399 aaPredicted RBP11.43□□□□□ -0.58
MKS1-212ENST00000583577 IL23AQ9NPF7 189 aa11.43□□□□□ -0.58
MKS1-212ENST00000583577 DCP1AQ9NPI6 582 aaPredicted RBP11.43□□□□□ -0.58
MKS1-212ENST00000583577 PDRG1Q9NUG6 133 aa11.43□□□□□ -0.58
MKS1-212ENST00000583577 MCM9Q9NXL9 1143 aa11.43□□□□□ -0.58
MKS1-212ENST00000583577 HERC5Q9UII4 1024 aaKnown RBP11.43□□□□□ -0.58
MKS1-212ENST00000583577 USP17L15C9J2P7 530 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 USP17L13C9JLJ4 530 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 USP17L11C9JVI0 530 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 USP17L18D6R9N7 530 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 USP17L22D6RA61 530 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 USP17L17D6RBQ6 530 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 USP17L19D6RCP7 530 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 USP17L20D6RJB6 530 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 PRKAB2O43741 272 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 COBLO75128 1261 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 APPP05067 770 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 PTMAP06454 111 aaKnown RBP11.42□□□□□ -0.58
MKS1-212ENST00000583577 SYT1P21579 422 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 CYP2C18P33260 490 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 USP17L24Q0WX57 530 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 NMIQ13287 307 aaPredicted RBP11.42□□□□□ -0.58
MKS1-212ENST00000583577 NECTIN1Q15223 517 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 MCMDC2Q4G0Z9 681 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 FOXP4Q8IVH2 680 aaPredicted RBP11.42□□□□□ -0.58
MKS1-212ENST00000583577 RGS22Q8NE09 1264 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 MAP4K1Q92918 833 aa11.42□□□□□ -0.58
MKS1-212ENST00000583577 LENG1Q96BZ8 264 aaPredicted RBP11.42□□□□□ -0.58
MKS1-212ENST00000583577 SEC62Q99442 399 aaKnown RBP11.42□□□□□ -0.58
MKS1-212ENST00000583577 SCAND2PQ9GZW5 306 aaPredicted RBP11.42□□□□□ -0.58
MKS1-212ENST00000583577 BAHCC1Q9P281 2608 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 TECTAO75443 2155 aa11.41□□□□□ -0.58
MKS1-212ENST00000583577 A0A0D9SFI3 127 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms