RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 PPFIA1Q13136 1202 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 SH3RF1Q7Z6J0 888 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 KIAA1328Q86T90 577 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 ANKRD18AQ8IVF6 992 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 MCM8Q9UJA3 840 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 EPN1Q9Y6I3 576 aaPredicted RBP11.71□□□□□ -0.53
TOP3A-214ENST00000582981 PARP1P09874 1014 aaKnown RBP11.71□□□□□ -0.53
TOP3A-214ENST00000582981 C2orf54Q08AI8 447 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 PTPROQ16827 1216 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 WHAMMP3Q1A5X7 153 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 KCTD16Q68DU8 428 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 IRF2BP1Q8IU81 584 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 TEX11Q8IYF3 940 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
TOP3A-214ENST00000582981 CNTNAP5Q8WYK1 1306 aa11.71□□□□□ -0.53
TOP3A-214ENST00000582981 UTRNP46939 3433 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 COL4A1P02462 1669 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 USP17L3A6NCW0 530 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 USP17L4A6NCW7 530 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 NDUFA10O95299 355 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 GCFC2P16383 781 aaKnown RBP11.71□□□□□ -0.54
TOP3A-214ENST00000582981 AARSP49588 968 aaKnown RBP eCLIP11.71□□□□□ -0.54
TOP3A-214ENST00000582981 TMTC3Q6ZXV5 915 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 USP17L1Q7RTZ2 530 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 HEATR3Q7Z4Q2 680 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 CEP120Q8N960 986 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 CELF1Q92879 486 aaKnown RBP11.71□□□□□ -0.54
TOP3A-214ENST00000582981 GSDMAQ96QA5 445 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 SELENOOQ9BVL4 669 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 JADE2Q9NQC1 790 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 KLC4Q9NSK0 619 aa11.71□□□□□ -0.54
TOP3A-214ENST00000582981 SLIT2O94813 1529 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 ZNF142P52746 1687 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-214ENST00000582981 TRIM21P19474 475 aaKnown RBP11.7□□□□□ -0.54
TOP3A-214ENST00000582981 CRKLP46109 303 aaKnown RBP11.7□□□□□ -0.54
TOP3A-214ENST00000582981 PDXDC2PQ6P474 469 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 TICAM2Q86XR7 235 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 ZNF34Q8IZ26 560 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 RUFY1Q96T51 708 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 RIOK1Q9BRS2 568 aaKnown RBP11.7□□□□□ -0.54
TOP3A-214ENST00000582981 STX8Q9UNK0 236 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 ATP2C2O75185 946 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 FCER1AP12319 257 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 SLC7A5Q01650 507 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 ZNF512BQ96KM6 892 aaPredicted RBP11.7□□□□□ -0.54
TOP3A-214ENST00000582981 KANSL2Q9H9L4 492 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 TNS2Q63HR2 1409 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 SPEF2Q9C093 1822 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 TAF1P21675 1872 aa11.7□□□□□ -0.54
TOP3A-214ENST00000582981 PDE2AO00408 941 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 C21orf2O43822 256 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 PPP1R12BO60237 982 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 ADAMTS2O95450 1211 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 TUBBP07437 444 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 SCG2P13521 617 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 GCKP35557 465 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 HERVK_113P62684 666 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 ATP2C1P98194 919 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 ERFEQ4G0M1 354 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 CCDC152Q4G0S7 254 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 CYP26C1Q6V0L0 522 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 SND1Q7KZF4 910 aaKnown RBP eCLIP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 TXNRD3Q86VQ6 643 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 FMNL3Q8IVF7 1028 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 VIPAS39Q9H9C1 493 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 COL1A1P02452 1464 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 MEFVO15553 781 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 SHOX2O60902 331 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 PDHBP11177 359 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 GBP2P32456 591 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 RNASE9P60153 205 aaKnown RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 TUBB4BP68371 445 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 B4GALNT4Q76KP1 1039 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 TMTC2Q8N394 836 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 CTAGE1Q96RT6 745 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 MCM9Q9NXL9 1143 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 SAP30BPQ9UHR5 308 aaKnown RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 TTF2Q9UNY4 1162 aaKnown RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 LUC7L2Q9Y383 392 aaKnown RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 AGPSO00116 658 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 PRPF3O43395 683 aaKnown RBP11.69□□□□□ -0.54
TOP3A-214ENST00000582981 USP14P54578 494 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 IFT88Q13099 833 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 CCDC40Q4G0X9 1142 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 WDR93Q6P2C0 686 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 TMTC1Q8IUR5 882 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 SH2D3CQ8N5H7 860 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 CCDC155Q8N6L0 562 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 HDAC7Q8WUI4 952 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 GJA10Q969M2 543 aa11.69□□□□□ -0.54
TOP3A-214ENST00000582981 MYH6P13533 1939 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 RTL9Q8NET4 1388 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 A0A1B0GUA9 196 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 GNAT2P19087 354 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 CCNHP51946 323 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-214ENST00000582981 ITPK1Q13572 414 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 WDR59Q6PJI9 974 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 TMC4Q7Z404 712 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 TNFRSF25Q93038 417 aa11.68□□□□□ -0.54
TOP3A-214ENST00000582981 MLXIPQ9HAP2 919 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms