RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 C22orf23Q9BZE7 217 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 C11orf49Q9H6J7 331 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 RAVER2Q9HCJ3 691 aaKnown RBP11.52□□□□□ -0.57
GGA3-209ENST00000580646 ISY1Q9ULR0 285 aaKnown RBP11.52□□□□□ -0.57
GGA3-209ENST00000580646 DIS3Q9Y2L1 958 aaKnown RBP11.52□□□□□ -0.57
GGA3-209ENST00000580646 NID2Q14112 1375 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.57
GGA3-209ENST00000580646 BAZ2BQ9UIF8 2168 aaKnown RBP11.51□□□□□ -0.57
GGA3-209ENST00000580646 PALM3A6NDB9 673 aaPredicted RBP11.51□□□□□ -0.57
GGA3-209ENST00000580646 SMARCA1P28370 1054 aa11.51□□□□□ -0.57
GGA3-209ENST00000580646 PPP2R5BQ15173 497 aa11.51□□□□□ -0.57
GGA3-209ENST00000580646 CCDC96Q2M329 555 aa11.51□□□□□ -0.57
GGA3-209ENST00000580646 PRAMEF19Q5SWL8 479 aa11.51□□□□□ -0.57
GGA3-209ENST00000580646 Q6ZUG5 572 aa11.51□□□□□ -0.57
GGA3-209ENST00000580646 KCTD1Q719H9 257 aa11.51□□□□□ -0.57
GGA3-209ENST00000580646 SENP2Q9HC62 589 aa11.51□□□□□ -0.57
GGA3-209ENST00000580646 MAD2L2Q9UI95 211 aa11.51□□□□□ -0.57
GGA3-209ENST00000580646 PNMA2Q9UL42 364 aa11.51□□□□□ -0.57
GGA3-209ENST00000580646 SLC12A7Q9Y666 1083 aa11.51□□□□□ -0.57
GGA3-209ENST00000580646 PLXNA1Q9UIW2 1896 aa11.51□□□□□ -0.57
GGA3-209ENST00000580646 RANBP2P49792 3224 aaKnown RBP11.5□□□□□ -0.57
GGA3-209ENST00000580646 SEPT4O43236 478 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 COL6A1P12109 1028 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 KIF5BP33176 963 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 GNAQP50148 359 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 FGD1P98174 961 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 IKQ13123 557 aaPredicted RBP11.5□□□□□ -0.57
GGA3-209ENST00000580646 APOA5Q6Q788 366 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 SYNE3Q6ZMZ3 975 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.5□□□□□ -0.57
GGA3-209ENST00000580646 CHST13Q8NET6 341 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 CTCFLQ8NI51 663 aaPredicted RBP11.5□□□□□ -0.57
GGA3-209ENST00000580646 DDX11Q96FC9 970 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 TBC1D32Q96NH3 1257 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 LZTS2Q9BRK4 669 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 TINF2Q9BSI4 451 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 LRRC2Q9BYS8 371 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 RANBP17Q9H2T7 1088 aaKnown RBP11.5□□□□□ -0.57
GGA3-209ENST00000580646 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
GGA3-209ENST00000580646 FBXO40Q9UH90 709 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 PRR12Q9ULL5 1215 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 MTMR7Q9Y216 660 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 PFASO15067 1338 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 CEP290O15078 2479 aa11.5□□□□□ -0.57
GGA3-209ENST00000580646 DNAJC25-GNG10A0A024R161 153 aa11.49□□□□□ -0.57
GGA3-209ENST00000580646 CPA1P15085 419 aa11.49□□□□□ -0.57
GGA3-209ENST00000580646 TOB2Q14106 344 aaPredicted RBP11.49□□□□□ -0.57
GGA3-209ENST00000580646 ANKRD1Q15327 319 aa11.49□□□□□ -0.57
GGA3-209ENST00000580646 SYDE2Q5VT97 1194 aa11.49□□□□□ -0.57
GGA3-209ENST00000580646 ANO1Q5XXA6 986 aa11.49□□□□□ -0.57
GGA3-209ENST00000580646 CHRDL2Q6WN34 429 aa11.49□□□□□ -0.57
GGA3-209ENST00000580646 RASGRP2Q7LDG7 609 aa11.49□□□□□ -0.57
GGA3-209ENST00000580646 BRF1Q92994 677 aa11.49□□□□□ -0.57
GGA3-209ENST00000580646 TCEANC2Q96MN5 208 aa11.49□□□□□ -0.57
GGA3-209ENST00000580646 PDRG1Q9NUG6 133 aa11.49□□□□□ -0.57
GGA3-209ENST00000580646 RBM28Q9NW13 759 aaKnown RBP11.49□□□□□ -0.57
GGA3-209ENST00000580646 NRBP1Q9UHY1 535 aa11.49□□□□□ -0.57
GGA3-209ENST00000580646 FRMPD2Q68DX3 1309 aaPredicted RBP11.49□□□□□ -0.57
GGA3-209ENST00000580646 CUL9Q8IWT3 2517 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 KLF18A0A0U1RQI7 1052 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 KLRF2D3W0D1 207 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 DNM1LO00429 736 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 ZBTB43O43298 467 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 TTBK2Q6IQ55 1244 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 C7orf61Q8IZ16 206 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 ANKRD35Q8N283 1001 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 MSL3Q8N5Y2 521 aaKnown RBP11.48□□□□□ -0.57
GGA3-209ENST00000580646 FANCBQ8NB91 859 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 MTMR8Q96EF0 704 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 ZNF274Q96GC6 653 aaPredicted RBP11.48□□□□□ -0.57
GGA3-209ENST00000580646 AGBL1Q96MI9 1066 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 KIF2CQ99661 725 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 SPZ1Q9BXG8 430 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 UPF3BQ9BZI7 483 aaKnown RBP11.48□□□□□ -0.57
GGA3-209ENST00000580646 SENP6Q9GZR1 1112 aaPredicted RBP11.48□□□□□ -0.57
GGA3-209ENST00000580646 MAF1Q9H063 256 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 RIOX1Q9H6W3 641 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 GPCPD1Q9NPB8 672 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 BRPF3Q9ULD4 1205 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 ZNF536O15090 1300 aa11.48□□□□□ -0.57
GGA3-209ENST00000580646 CCDC196A0A1B0GTZ2 297 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 ICAM1P05362 532 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 ZNF865P0CJ78 1059 aaPredicted RBP11.47□□□□□ -0.57
GGA3-209ENST00000580646 GOLGA8HP0CJ92 632 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 TAL1P17542 331 aaPredicted RBP11.47□□□□□ -0.57
GGA3-209ENST00000580646 SNAP25P60880 206 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 RABEP1Q15276 862 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 TKFCQ3LXA3 575 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 GJC2Q5T442 439 aaPredicted RBP11.47□□□□□ -0.57
GGA3-209ENST00000580646 CCDC174Q6PII3 467 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 MAMDC4Q6UXC1 1216 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
GGA3-209ENST00000580646 STAG2Q8N3U4 1231 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 SLC17A8Q8NDX2 589 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 NUP133Q8WUM0 1156 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 HOMER2Q9NSB8 354 aa11.47□□□□□ -0.57
GGA3-209ENST00000580646 ZMYND8Q9ULU4 1186 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms