RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 PORCNQ9H237 461 aa14.1□□□□□ -0.15
CCDC84-209ENST00000580556 SEMA6BQ9H3T3 888 aa14.1□□□□□ -0.15
CCDC84-209ENST00000580556 SH2B1Q9NRF2 756 aaPredicted RBP14.1□□□□□ -0.15
CCDC84-209ENST00000580556 RAPGEFL1Q9UHV5 662 aa14.1□□□□□ -0.15
CCDC84-209ENST00000580556 LTBP2Q14767 1821 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 TMEM232C9JQI7 657 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 CD2BP2O95400 341 aaKnown RBP14.09□□□□□ -0.15
CCDC84-209ENST00000580556 FDX1P10109 184 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 XRCC5P13010 732 aaKnown RBP14.09□□□□□ -0.15
CCDC84-209ENST00000580556 SHHQ15465 462 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 C9orf50Q5SZB4 431 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 LBX2Q6XYB7 198 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 TMTC3Q6ZXV5 915 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 KCTD1Q719H9 257 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 GTF3C2Q8WUA4 911 aaPredicted RBP14.09□□□□□ -0.15
CCDC84-209ENST00000580556 USP6NLQ92738 828 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 LBHD1Q9BQE6 289 aaPredicted RBP14.09□□□□□ -0.15
CCDC84-209ENST00000580556 SLF1Q9BQI6 1058 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 SPZ1Q9BXG8 430 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 MTMR7Q9Y216 660 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 A0A0G2JMZ2 1700 aa14.09□□□□□ -0.15
CCDC84-209ENST00000580556 PARP14Q460N5 1801 aa14.08□□□□□ -0.15
CCDC84-209ENST00000580556 KLRF2D3W0D1 207 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 DHX16O60231 1041 aaKnown RBP14.08□□□□□ -0.16
CCDC84-209ENST00000580556 FLOT1O75955 427 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 RXRAP19793 462 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 IRX3P78415 501 aaPredicted RBP14.08□□□□□ -0.16
CCDC84-209ENST00000580556 COG2Q14746 738 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 ME3Q16798 604 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 STAG2Q8N3U4 1231 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 PRPF38AQ8NAV1 312 aaKnown RBP14.08□□□□□ -0.16
CCDC84-209ENST00000580556 GTF3C6Q969F1 213 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 SLKQ9H2G2 1235 aaPredicted RBP14.08□□□□□ -0.16
CCDC84-209ENST00000580556 TTYH1Q9H313 450 aaPredicted RBP14.08□□□□□ -0.16
CCDC84-209ENST00000580556 FAM217BQ9NTX9 383 aaPredicted RBP14.08□□□□□ -0.16
CCDC84-209ENST00000580556 HOXC10Q9NYD6 342 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 RBPJLQ9UBG7 517 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 PPP1R9AQ9ULJ8 1098 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 NAP1L2Q9ULW6 460 aaPredicted RBP14.08□□□□□ -0.16
CCDC84-209ENST00000580556 ADAMTS5Q9UNA0 930 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 FRMPD2Q68DX3 1309 aaPredicted RBP14.08□□□□□ -0.16
CCDC84-209ENST00000580556 MUC3AQ02505 3323 aa14.08□□□□□ -0.16
CCDC84-209ENST00000580556 RLFQ13129 1914 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 COL9A1P20849 921 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 CDC27P30260 824 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 DSG3P32926 999 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 HERVK_113P62684 666 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 MORN1Q5T089 497 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 SYDE2Q5VT97 1194 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 GPR142Q7Z601 462 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 MB21D1Q8N884 522 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 GPRC5AQ8NFJ5 357 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 SOCS4Q8WXH5 440 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 LARP6Q9BRS8 491 aaKnown RBP14.07□□□□□ -0.16
CCDC84-209ENST00000580556 RIOX1Q9H6W3 641 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 GPCPD1Q9NPB8 672 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 FLRT1Q9NZU1 646 aa14.07□□□□□ -0.16
CCDC84-209ENST00000580556 SPDYE16A6NNV3 312 aaPredicted RBP14.06□□□□□ -0.16
CCDC84-209ENST00000580556 CDKL5O76039 1030 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 LARGE1O95461 756 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 GOLGA8HP0CJ92 632 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 IFNAR1P17181 557 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 FUT2Q10981 343 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 SCRN1Q12765 414 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 IKQ13123 557 aaPredicted RBP14.06□□□□□ -0.16
CCDC84-209ENST00000580556 NTRK3Q16288 839 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 TTBK2Q6IQ55 1244 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 CPLX2Q6PUV4 134 aaKnown RBP14.06□□□□□ -0.16
CCDC84-209ENST00000580556 NOL8Q76FK4 1167 aaKnown RBP14.06□□□□□ -0.16
CCDC84-209ENST00000580556 RAB11FIP4Q86YS3 637 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 CCDC144CPQ8IYA2 1237 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 MTMR8Q96EF0 704 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 TMX3Q96JJ7 454 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 PAGR1Q9BTK6 254 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 RANBP17Q9H2T7 1088 aaKnown RBP14.06□□□□□ -0.16
CCDC84-209ENST00000580556 FBXO28Q9NVF7 368 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 PRR12Q9ULL5 1215 aa14.06□□□□□ -0.16
CCDC84-209ENST00000580556 ISY1Q9ULR0 285 aaKnown RBP14.06□□□□□ -0.16
CCDC84-209ENST00000580556 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
CCDC84-209ENST00000580556 VWA5AO00534 786 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 CPLX1O14810 134 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 ATP2A1O14983 1001 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 CYTH3O43739 400 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 PLEKHA8P1O95397 391 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 ADD1P35611 737 aaKnown RBP14.05□□□□□ -0.16
CCDC84-209ENST00000580556 RGS2P41220 211 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 OAZ1P54368 228 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 RTP1P59025 263 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 ERVK-9P63128 1117 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 ERVK-24P63145 666 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 CCT2P78371 535 aaKnown RBP14.05□□□□□ -0.16
CCDC84-209ENST00000580556 SLC35G1Q2M3R5 365 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 HSCBQ8IWL3 235 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 SRBD1Q8N5C6 995 aaKnown RBP14.05□□□□□ -0.16
CCDC84-209ENST00000580556 LLPHQ9BRT6 129 aaKnown RBP14.05□□□□□ -0.16
CCDC84-209ENST00000580556 SLC38A10Q9HBR0 1119 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 NCOA5Q9HCD5 579 aaKnown RBP14.05□□□□□ -0.16
CCDC84-209ENST00000580556 PNMA2Q9UL42 364 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 CNTNAP5Q8WYK1 1306 aa14.05□□□□□ -0.16
CCDC84-209ENST00000580556 MAPK4P31152 587 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms