RNA–Protein interactions for RNA: ENST00000580048.1

LINC00909-202, long intergenic non-protein coding RNA 909, humanhuman

TSL 1 (best) BASIC

Gene LINC00909, Length 3,463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00909-202ENST00000580048 CTNNA1P35221 906 aaKnown RBP11.36□□□□□ -0.59
LINC00909-202ENST00000580048 SCARF1Q14162 830 aa11.36□□□□□ -0.59
LINC00909-202ENST00000580048 GLE1Q53GS7 698 aaKnown RBP11.36□□□□□ -0.59
LINC00909-202ENST00000580048 ARMC3Q5W041 872 aa11.36□□□□□ -0.59
LINC00909-202ENST00000580048 PPP4R3AQ6IN85 833 aa11.36□□□□□ -0.59
LINC00909-202ENST00000580048 ATG9AQ7Z3C6 839 aa11.36□□□□□ -0.59
LINC00909-202ENST00000580048 PROSER2Q86WR7 435 aaPredicted RBP11.36□□□□□ -0.59
LINC00909-202ENST00000580048 UBLCP1Q8WVY7 318 aaPredicted RBP11.36□□□□□ -0.59
LINC00909-202ENST00000580048 NUP58Q9BVL2 599 aa11.36□□□□□ -0.59
LINC00909-202ENST00000580048 FOXP1Q9H334 677 aaPredicted RBP11.36□□□□□ -0.59
LINC00909-202ENST00000580048 SLC39A2Q9NP94 309 aa11.36□□□□□ -0.59
LINC00909-202ENST00000580048 AATFQ9NY61 560 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC00909-202ENST00000580048 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
LINC00909-202ENST00000580048 MTIF2P46199 727 aaKnown RBP11.36□□□□□ -0.59
LINC00909-202ENST00000580048 CFAP221Q4G0U5 840 aa11.36□□□□□ -0.59
LINC00909-202ENST00000580048 PCDHA13Q9Y5I0 950 aa11.36□□□□□ -0.59
LINC00909-202ENST00000580048 XDHP47989 1333 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 NBPF9Q3BBW0 867 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 CASKIN2Q8WXE0 1202 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 PIK3R5Q8WYR1 880 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 PLIN2Q99541 437 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 N4BP2Q86UW6 1770 aaPredicted RBP11.35□□□□□ -0.59
LINC00909-202ENST00000580048 ZNF263O14978 683 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 TRAPPC3O43617 180 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 PRDM1O75626 825 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 IL15P40933 162 aaPredicted RBP11.35□□□□□ -0.59
LINC00909-202ENST00000580048 PMS1P54277 932 aaKnown RBP11.35□□□□□ -0.59
LINC00909-202ENST00000580048 CTDSPL2Q05D32 466 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 XRCC4Q13426 336 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 CCDC26Q8TAB7 109 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 MAGEC3Q8TD91 643 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 RAPGEF5Q92565 580 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 LY9Q9HBG7 655 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 C15orf41Q9Y2V0 281 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 MAP3K15Q6ZN16 1313 aa11.35□□□□□ -0.59
LINC00909-202ENST00000580048 H7C1D1 291 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 MGRN1O60291 552 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 CAND2O75155 1236 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 ZFYP08048 801 aaPredicted RBP11.34□□□□□ -0.59
LINC00909-202ENST00000580048 PTPROQ16827 1216 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 GRIPAP1Q4V328 841 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 MAEAQ7L5Y9 396 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 TMC4Q7Z404 712 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 SH3RF1Q7Z6J0 888 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 CCDC170Q8IYT3 715 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 CCDC47Q96A33 483 aaKnown RBP11.34□□□□□ -0.59
LINC00909-202ENST00000580048 TUBGCP2Q9BSJ2 902 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 BATF3Q9NR55 127 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 FAM207AQ9NSI2 230 aaPredicted RBP11.34□□□□□ -0.59
LINC00909-202ENST00000580048 GGA2Q9UJY4 613 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 SNUPNO95149 360 aaKnown RBP11.34□□□□□ -0.59
LINC00909-202ENST00000580048 RPN1P04843 607 aaKnown RBP11.34□□□□□ -0.59
LINC00909-202ENST00000580048 MAGEA1P43355 309 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 RWDD2BP57060 319 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 RASSF7Q02833 373 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 GNPTABQ3T906 1256 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 IRF2BP1Q8IU81 584 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 MDM1Q8TC05 714 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 TMEM87BQ96K49 555 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 SH2D4AQ9H788 454 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 EXOC1Q9NV70 894 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 GGT7Q9UJ14 662 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 PACSIN2Q9UNF0 486 aaPredicted RBP11.34□□□□□ -0.59
LINC00909-202ENST00000580048 A2ML1A8K2U0 1454 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 FTCDO95954 541 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 DNM2P50570 870 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 MAGOHP61326 146 aaKnown RBP11.34□□□□□ -0.59
LINC00909-202ENST00000580048 EARS2Q5JPH6 523 aaKnown RBP11.34□□□□□ -0.59
LINC00909-202ENST00000580048 MAB21L3Q8N8X9 362 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 MAGOHBQ96A72 148 aaKnown RBP11.34□□□□□ -0.59
LINC00909-202ENST00000580048 TMBIM4Q9HC24 238 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 LRRC37A3O60309 1634 aa11.34□□□□□ -0.59
LINC00909-202ENST00000580048 WNT7AO00755 349 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 IFNAR1P17181 557 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 EIF4A3P38919 411 aaKnown RBP11.33□□□□□ -0.6
LINC00909-202ENST00000580048 KIF11P52732 1056 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 ZBED6P86452 979 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 PSMD2Q13200 908 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 ENOX2Q16206 610 aaKnown RBP11.33□□□□□ -0.6
LINC00909-202ENST00000580048 CDC37Q16543 378 aaPredicted RBP11.33□□□□□ -0.6
LINC00909-202ENST00000580048 ZNF658Q5TYW1 1059 aaPredicted RBP11.33□□□□□ -0.6
LINC00909-202ENST00000580048 TRIM68Q6AZZ1 485 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 DDX42Q86XP3 938 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00909-202ENST00000580048 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 ZSWIM5Q9P217 1185 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 WDR17Q8IZU2 1322 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 MST1RQ04912 1400 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 HGSO14964 777 aaPredicted RBP11.33□□□□□ -0.6
LINC00909-202ENST00000580048 TRIM37O94972 964 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 PTGDRQ13258 359 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 KRT71Q3SY84 523 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 RABL6Q3YEC7 729 aaPredicted RBP11.33□□□□□ -0.6
LINC00909-202ENST00000580048 TTLL7Q6ZT98 887 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 AGAP11Q8TF27 550 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 STK38LQ9Y2H1 464 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 DCDC2CA8MYV0 355 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 EYA2O00167 538 aa11.33□□□□□ -0.6
LINC00909-202ENST00000580048 CTNND1O60716 968 aaKnown RBP11.33□□□□□ -0.6
LINC00909-202ENST00000580048 DEXIO95424 95 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms