RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 ZNF335Q9H4Z2 1342 aaPredicted RBP16.72■□□□□ 0.27
ITGB4-206ENST00000579662 RPS6KA4O75676 772 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 ERCC3P19447 782 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 ABCD1P33897 745 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 KIF23Q02241 960 aaPredicted RBP16.72■□□□□ 0.27
ITGB4-206ENST00000579662 ITIH3Q06033 890 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 LGSNQ5TDP6 509 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 KLHL7Q8IXQ5 586 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 METTL13Q8N6R0 699 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 LARP4BQ92615 738 aaKnown RBP16.72■□□□□ 0.27
ITGB4-206ENST00000579662 WDR11Q9BZH6 1224 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 PPP2R5AQ15172 486 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 INTS8Q75QN2 995 aaKnown RBP16.72■□□□□ 0.27
ITGB4-206ENST00000579662 NCAPG2Q86XI2 1143 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 PI4K2BQ8TCG2 481 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 ATP6V0A1Q93050 837 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 DHTKD1Q96HY7 919 aaPredicted RBP16.72■□□□□ 0.27
ITGB4-206ENST00000579662 LRCH2Q5VUJ6 765 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 ARMCX5Q6P1M9 558 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 HYOU1Q9Y4L1 999 aa16.72■□□□□ 0.27
ITGB4-206ENST00000579662 PDE6CP51160 858 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 MNAT1P51948 309 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 CCNA1P78396 465 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 SUPT20HL1Q3ZLR7 823 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 B4GALNT4Q76KP1 1039 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 HAUS4Q9H6D7 363 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 STK17AQ9UEE5 414 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 ANAPC4Q9UJX5 808 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 RFX7Q2KHR2 1363 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 CDHR2Q9BYE9 1310 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 TMOD1P28289 359 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 LRMPQ12912 555 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 TFDP1Q14186 410 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 KIF22Q14807 665 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 JPH2Q9BR39 696 aaPredicted RBP16.71■□□□□ 0.27
ITGB4-206ENST00000579662 BRIP1Q9BX63 1249 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 FANCLQ9NW38 375 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 POLGP54098 1239 aaPredicted RBP16.71■□□□□ 0.27
ITGB4-206ENST00000579662 PKP1Q13835 747 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 SIRT2Q8IXJ6 389 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 BEGAINQ9BUH8 593 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 SLC39A2Q9NP94 309 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 PLEKHG2Q9H7P9 1386 aa16.71■□□□□ 0.27
ITGB4-206ENST00000579662 GPR162Q16538 588 aa16.71■□□□□ 0.26
ITGB4-206ENST00000579662 STIM2Q9P246 746 aa16.71■□□□□ 0.26
ITGB4-206ENST00000579662 PI4KBQ9UBF8 816 aa16.71■□□□□ 0.26
ITGB4-206ENST00000579662 GOLGA6CA6NDK9 693 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 GOLGA6BA6NDN3 693 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 CYP27B1O15528 508 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 GOLGA6DP0CG33 693 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 RASGRF1Q13972 1273 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 ELF2Q15723 593 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 LONRF2Q1L5Z9 754 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 GOLGA6AQ9NYA3 693 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 USP31Q70CQ4 1352 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 IKBKBO14920 756 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 BMP3P12645 472 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 EEF1GP26641 437 aaKnown RBP16.7■□□□□ 0.26
ITGB4-206ENST00000579662 YARSP54577 528 aaKnown RBP16.7■□□□□ 0.26
ITGB4-206ENST00000579662 SPATA24Q86W54 205 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 PIH1D3Q9NQM4 214 aaKnown RBP16.7■□□□□ 0.26
ITGB4-206ENST00000579662 KIAA1024Q9UPX6 916 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 MADDQ8WXG6 1647 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 KCTD2Q14681 263 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 EXOC8Q8IYI6 725 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 GRK7Q8WTQ7 553 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 PRKAB2O43741 272 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 COPB1P53618 953 aaKnown RBP16.7■□□□□ 0.26
ITGB4-206ENST00000579662 RTKN2Q8IZC4 609 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 TDRD7Q8NHU6 1098 aaKnown RBP16.7■□□□□ 0.26
ITGB4-206ENST00000579662 PPP2R2CQ9Y2T4 447 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 BZW2Q9Y6E2 419 aaKnown RBP16.7■□□□□ 0.26
ITGB4-206ENST00000579662 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 OVOS2A0A0J9YW53 1432 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 OVOS2Q6IE36 1432 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 U2AF2P26368 475 aaKnown RBP eCLIP16.7■□□□□ 0.26
ITGB4-206ENST00000579662 MECOMQ03112 1051 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 ZNF827Q17R98 1081 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 ZNF577Q9BSK1 485 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 RIC8AQ9NPQ8 531 aa16.7■□□□□ 0.26
ITGB4-206ENST00000579662 VIMP08670 466 aaKnown RBP16.69■□□□□ 0.26
ITGB4-206ENST00000579662 OSBPP22059 807 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 CCDC89Q8N998 374 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 TRIM31Q9BZY9 425 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 DBNDD1Q9H9R9 158 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 RAB20Q9NX57 234 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 HPDP32754 393 aaPredicted RBP16.69■□□□□ 0.26
ITGB4-206ENST00000579662 SEPT12Q8IYM1 358 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 CCDC110Q8TBZ0 833 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 CDHR1Q96JP9 859 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 FAM184BQ9ULE4 1060 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 QRICH2Q9H0J4 1663 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 CLRN2A0PK11 232 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 SEPT2Q15019 361 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 HADHQ16836 314 aaKnown RBP16.69■□□□□ 0.26
ITGB4-206ENST00000579662 ADD3Q9UEY8 706 aaKnown RBP16.69■□□□□ 0.26
ITGB4-206ENST00000579662 PPFIA1Q13136 1202 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 NECTIN1Q15223 517 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 ERCC6LQ2NKX8 1250 aa16.69■□□□□ 0.26
ITGB4-206ENST00000579662 AFAP1L2Q8N4X5 818 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms