RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 CUTAO60888 179 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 PRPF6O94906 941 aaKnown RBP8.29□□□□□ -1.08
DDX42-207ENST00000578593 CNGA1P29973 690 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 USP5P45974 858 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 KRT32Q14532 448 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 PPP2R5BQ15173 497 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 BEND3Q5T5X7 828 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 TMEM53Q6P2H8 277 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 GIGYF2Q6Y7W6 1299 aaKnown RBP8.29□□□□□ -1.08
DDX42-207ENST00000578593 SRGAP1Q7Z6B7 1085 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 ARHGEF25Q86VW2 580 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 PI4KAP1Q8N8J0 262 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 MIGA1Q8NAN2 632 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 LLPHQ9BRT6 129 aaKnown RBP8.29□□□□□ -1.08
DDX42-207ENST00000578593 TCHPQ9BT92 498 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 SLC5A4Q9NY91 659 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 MAP3K20Q9NYL2 800 aaKnown RBP8.29□□□□□ -1.08
DDX42-207ENST00000578593 TTLL3Q9Y4R7 772 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 ASB3Q9Y575 518 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 CCDC61Q9Y6R9 512 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 COL15A1P39059 1388 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 AGLP35573 1532 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 PFKFB2O60825 505 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 ALDH1L1O75891 902 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 ZNF202O95125 648 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 ATICP31939 592 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 PSMC4P43686 418 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 MTX1Q13505 466 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 LRP8Q14114 963 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 CASP8Q14790 479 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 TRIM50Q86XT4 487 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 PDILTQ8N807 584 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 LINC00301Q8NCQ3 95 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 EDC3Q96F86 508 aaKnown RBP8.29□□□□□ -1.08
DDX42-207ENST00000578593 MAML3Q96JK9 1138 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 SNX27Q96L92 541 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 ZNF570Q96NI8 536 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 KAT14Q9H8E8 782 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 NCOA5Q9HCD5 579 aaKnown RBP8.29□□□□□ -1.08
DDX42-207ENST00000578593 HESX1Q9UBX0 185 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 RAB21Q9UL25 225 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 SAMM50Q9Y512 469 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 CLIC4Q9Y696 253 aa8.29□□□□□ -1.08
DDX42-207ENST00000578593 TRIM43BA6NCK2 446 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 CYP21A2P08686 494 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 CCDC166P0CW27 439 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 HSPA8P11142 646 aaKnown RBP8.28□□□□□ -1.08
DDX42-207ENST00000578593 ALDH3A1P30838 453 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 ADKP55263 362 aaKnown RBP8.28□□□□□ -1.08
DDX42-207ENST00000578593 IFFO1Q0D2I5 559 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 ITGA7Q13683 1181 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 STK38Q15208 465 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 HSP90AA4PQ58FG1 418 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 USPL1Q5W0Q7 1092 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 EXOC3L1Q86VI1 746 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 LZICQ8WZA0 190 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 PPP2R3CQ969Q6 453 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 TBC1D31Q96DN5 1066 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 STAMBPL1Q96FJ0 436 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 MRPL46Q9H2W6 279 aaKnown RBP8.28□□□□□ -1.08
DDX42-207ENST00000578593 MRPL44Q9H9J2 332 aaKnown RBP8.28□□□□□ -1.08
DDX42-207ENST00000578593 INTS13Q9NVM9 706 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 RHBDL2Q9NX52 303 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 CDHR2Q9BYE9 1310 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 RASSF10A6NK89 507 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 SPTLC2O15270 562 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 TFRCP02786 760 aaKnown RBP8.28□□□□□ -1.08
DDX42-207ENST00000578593 CHGBP05060 677 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 SSBP05455 408 aaKnown RBP eCLIP8.28□□□□□ -1.08
DDX42-207ENST00000578593 MLH1P40692 756 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 KIF11P52732 1056 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 VSNL1P62760 191 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 MYL5Q02045 173 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 MKRN4PQ13434 485 aaPredicted RBP8.28□□□□□ -1.08
DDX42-207ENST00000578593 WHAMMP3Q1A5X7 153 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 MSANTD4Q8NCY6 345 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 DEPTORQ8TB45 409 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 KLHDC4Q8TBB5 520 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 GBP3Q9H0R5 595 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 R3HDM2Q9Y2K5 976 aaKnown RBP8.28□□□□□ -1.08
DDX42-207ENST00000578593 L3MBTL1Q9Y468 752 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 SLC30A1Q9Y6M5 507 aa8.28□□□□□ -1.08
DDX42-207ENST00000578593 STX10O60499 249 aa8.27□□□□□ -1.09
DDX42-207ENST00000578593 BUB1BO60566 1050 aaPredicted RBP8.27□□□□□ -1.09
DDX42-207ENST00000578593 ANXA1P04083 346 aa8.27□□□□□ -1.09
DDX42-207ENST00000578593 POLR3DP05423 398 aaPredicted RBP8.27□□□□□ -1.09
DDX42-207ENST00000578593 RHOXF2BP0C7M4 288 aa8.27□□□□□ -1.09
DDX42-207ENST00000578593 CNGA3Q16281 694 aa8.27□□□□□ -1.09
DDX42-207ENST00000578593 RABL6Q3YEC7 729 aaPredicted RBP8.27□□□□□ -1.09
DDX42-207ENST00000578593 MEX3CQ5U5Q3 659 aaKnown RBP8.27□□□□□ -1.09
DDX42-207ENST00000578593 OTUD7BQ6GQQ9 843 aa8.27□□□□□ -1.09
DDX42-207ENST00000578593 POTEEQ6S8J3 1075 aa8.27□□□□□ -1.09
DDX42-207ENST00000578593 STOX1Q6ZVD7 989 aa8.27□□□□□ -1.09
DDX42-207ENST00000578593 THEMISQ8N1K5 641 aaPredicted RBP8.27□□□□□ -1.09
DDX42-207ENST00000578593 TC2NQ8N9U0 490 aa8.27□□□□□ -1.09
DDX42-207ENST00000578593 SMC1BQ8NDV3 1235 aa8.27□□□□□ -1.09
DDX42-207ENST00000578593 ZMAT2Q96NC0 199 aaKnown RBP8.27□□□□□ -1.09
DDX42-207ENST00000578593 RHOXF2Q9BQY4 288 aa8.27□□□□□ -1.09
DDX42-207ENST00000578593 TANGO6Q9C0B7 1094 aa8.27□□□□□ -1.09
DDX42-207ENST00000578593 DHX36Q9H2U1 1008 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms