RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 ALDH8A1Q9H2A2 487 aaPredicted RBP16.13■□□□□ 0.17
SNORD3B-1-201ENST00000577988 CPVLQ9H3G5 476 aa16.13■□□□□ 0.17
SNORD3B-1-201ENST00000577988 BRPF3Q9ULD4 1205 aa16.13■□□□□ 0.17
SNORD3B-1-201ENST00000577988 MRPL11Q9Y3B7 192 aaKnown RBP16.13■□□□□ 0.17
SNORD3B-1-201ENST00000577988 PLXNA1Q9UIW2 1896 aa16.13■□□□□ 0.17
SNORD3B-1-201ENST00000577988 ABCB11O95342 1321 aa16.13■□□□□ 0.17
SNORD3B-1-201ENST00000577988 LOC102724159A0A0B4J2E5 919 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 KLF18A0A0U1RQI7 1052 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 IGHA2P01877 340 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 CPA1P15085 419 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 PWP2Q15269 919 aaKnown RBP16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 MAP3K21Q5TCX8 1036 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 MICU3Q86XE3 530 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 MCF2L2Q86YR7 1114 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 BRF1Q92994 677 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 MAML3Q96JK9 1138 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 MYL10Q9BUA6 226 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 HMX1Q9NP08 348 aaPredicted RBP16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 A1CFQ9NQ94 594 aaKnown RBP16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 HOMER2Q9NSB8 354 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 MAP3K20Q9NYL2 800 aaKnown RBP16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 NRBP1Q9UHY1 535 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 RPTORQ8N122 1335 aa16.12■□□□□ 0.17
SNORD3B-1-201ENST00000577988 POTEB2H3BUK9 544 aa16.11■□□□□ 0.17
SNORD3B-1-201ENST00000577988 CYTH3O43739 400 aa16.11■□□□□ 0.17
SNORD3B-1-201ENST00000577988 RTN1Q16799 776 aa16.11■□□□□ 0.17
SNORD3B-1-201ENST00000577988 MUM1L1Q5H9M0 696 aa16.11■□□□□ 0.17
SNORD3B-1-201ENST00000577988 MAMDC4Q6UXC1 1216 aa16.11■□□□□ 0.17
SNORD3B-1-201ENST00000577988 FAM133AQ8N9E0 248 aa16.11■□□□□ 0.17
SNORD3B-1-201ENST00000577988 IL27Q8NEV9 243 aa16.11■□□□□ 0.17
SNORD3B-1-201ENST00000577988 CLEC4DQ8WXI8 215 aa16.11■□□□□ 0.17
SNORD3B-1-201ENST00000577988 RRP36Q96EU6 259 aaKnown RBP16.11■□□□□ 0.17
SNORD3B-1-201ENST00000577988 UPF2Q9HAU5 1272 aaKnown RBP16.11■□□□□ 0.17
SNORD3B-1-201ENST00000577988 PDRG1Q9NUG6 133 aa16.11■□□□□ 0.17
SNORD3B-1-201ENST00000577988 PGK2P07205 417 aa16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 GJB1P08034 283 aa16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 CCL5P13501 91 aa16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 APOBRQ0VD83 1088 aa16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 ANKRD1Q15327 319 aa16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 CCL14Q16627 93 aa16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 SLC35G1Q2M3R5 365 aa16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 TMTC3Q6ZXV5 915 aa16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 SRBD1Q8N5C6 995 aaKnown RBP16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 ZNF274Q96GC6 653 aaPredicted RBP16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 PIGSQ96S52 555 aa16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 RNF208Q9H0X6 261 aa16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 CYP39A1Q9NYL5 469 aa16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 ADD3Q9UEY8 706 aaKnown RBP16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 SEC63Q9UGP8 760 aaKnown RBP16.1■□□□□ 0.17
SNORD3B-1-201ENST00000577988 ASB14A6NK59 587 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 GOLGA8AA7E2F4 631 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 GOLGA8BA8MQT2 603 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 RXRAP19793 462 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 METAP2P50579 478 aaKnown RBP eCLIP16.09■□□□□ 0.171e-23■■■■■ 65
SNORD3B-1-201ENST00000577988 CACNB2Q08289 660 aaPredicted RBP16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 USH1GQ495M9 461 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 NSMFQ6X4W1 530 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 RNF207Q6ZRF8 634 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 TINF2Q9BSI4 451 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 UPF3BQ9BZI7 483 aaKnown RBP16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 FLRT1Q9NZU1 646 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 PCDHA1Q9Y5I3 950 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 SYNGAP1Q96PV0 1343 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 NID2Q14112 1375 aa16.09■□□□□ 0.17
SNORD3B-1-201ENST00000577988 B4DLN1 442 aa16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 NFIBO00712 420 aa16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 MSCO60682 206 aa16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 PLEKHA8P1O95397 391 aa16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 PRKAR2AP13861 404 aaKnown RBP16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 MRPL12P52815 198 aaKnown RBP16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 GHRHRQ02643 423 aa16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 BAATQ14032 418 aaPredicted RBP16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 TOB2Q14106 344 aaPredicted RBP16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 MTFR1Q15390 333 aa16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 HOMER1Q86YM7 354 aa16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 TEX2Q8IWB9 1127 aa16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 CCDC144CPQ8IYA2 1237 aa16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 MPHOSPH6Q99547 160 aaKnown RBP16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 UNC93B1Q9H1C4 597 aa16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 PAK6Q9NQU5 681 aaPredicted RBP16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 RBM27Q9P2N5 1060 aaKnown RBP16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 NAP1L2Q9ULW6 460 aaPredicted RBP16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 RBBP6Q7Z6E9 1792 aaKnown RBP16.08■□□□□ 0.16
SNORD3B-1-201ENST00000577988 PTPDC1A2A3K4 754 aa16.07■□□□□ 0.16
SNORD3B-1-201ENST00000577988 PDIA3P30101 505 aaKnown RBP16.07■□□□□ 0.16
SNORD3B-1-201ENST00000577988 RBM25P49756 843 aaKnown RBP16.07■□□□□ 0.16
SNORD3B-1-201ENST00000577988 RPS6P62753 249 aaKnown RBP16.07■□□□□ 0.16
SNORD3B-1-201ENST00000577988 IFFO2Q5TF58 517 aa16.07■□□□□ 0.16
SNORD3B-1-201ENST00000577988 DNERQ8NFT8 737 aa16.07■□□□□ 0.16
SNORD3B-1-201ENST00000577988 C22orf23Q9BZE7 217 aa16.07■□□□□ 0.16
SNORD3B-1-201ENST00000577988 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.07■□□□□ 0.162e-12■■■■■ 172.7
SNORD3B-1-201ENST00000577988 FAM217BQ9NTX9 383 aaPredicted RBP16.07■□□□□ 0.16
SNORD3B-1-201ENST00000577988 CNPY2Q9Y2B0 182 aa16.07■□□□□ 0.16
SNORD3B-1-201ENST00000577988 hCG_1984214I3L0E3 225 aa16.06■□□□□ 0.16
SNORD3B-1-201ENST00000577988 PPP1R11O60927 126 aaPredicted RBP16.06■□□□□ 0.16
SNORD3B-1-201ENST00000577988 SGPL1O95470 568 aa16.06■□□□□ 0.16
SNORD3B-1-201ENST00000577988 CYBAP13498 195 aa16.06■□□□□ 0.16
SNORD3B-1-201ENST00000577988 CDC27P30260 824 aa16.06■□□□□ 0.16
SNORD3B-1-201ENST00000577988 CYP2C19P33261 490 aa16.06■□□□□ 0.16
SNORD3B-1-201ENST00000577988 GJA8P48165 433 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms