RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 LRRC2Q9BYS8 371 aa15.46■□□□□ 0.07
RPAIN-216ENST00000575599 LY9Q9HBG7 655 aa15.46■□□□□ 0.07
RPAIN-216ENST00000575599 VAT1LQ9HCJ6 419 aa15.46■□□□□ 0.07
RPAIN-216ENST00000575599 SMCHD1A6NHR9 2005 aa15.45■□□□□ 0.06
RPAIN-216ENST00000575599 FRMPD3Q5JV73 1810 aa15.45■□□□□ 0.06
RPAIN-216ENST00000575599 SH2B2O14492 632 aaPredicted RBP15.45■□□□□ 0.06
RPAIN-216ENST00000575599 REC8O95072 547 aa15.45■□□□□ 0.06
RPAIN-216ENST00000575599 GRM4Q14833 912 aa15.45■□□□□ 0.06
RPAIN-216ENST00000575599 NFXL1Q6ZNB6 911 aa15.45■□□□□ 0.06
RPAIN-216ENST00000575599 RASEFQ8IZ41 740 aa15.45■□□□□ 0.06
RPAIN-216ENST00000575599 NUP133Q8WUM0 1156 aa15.45■□□□□ 0.06
RPAIN-216ENST00000575599 MYL10Q9BUA6 226 aa15.45■□□□□ 0.06
RPAIN-216ENST00000575599 DDX20Q9UHI6 824 aaKnown RBP15.45■□□□□ 0.06
RPAIN-216ENST00000575599 MAD2L2Q9UI95 211 aa15.45■□□□□ 0.06
RPAIN-216ENST00000575599 PFASO15067 1338 aa15.45■□□□□ 0.06
RPAIN-216ENST00000575599 WDR19Q8NEZ3 1342 aa15.45■□□□□ 0.06
RPAIN-216ENST00000575599 KLRF2D3W0D1 207 aa15.44■□□□□ 0.06
RPAIN-216ENST00000575599 NFIBO00712 420 aa15.44■□□□□ 0.06
RPAIN-216ENST00000575599 CNTN2Q02246 1040 aa15.44■□□□□ 0.06
RPAIN-216ENST00000575599 ANO1Q5XXA6 986 aa15.44■□□□□ 0.06
RPAIN-216ENST00000575599 ZNF654Q8IZM8 581 aa15.44■□□□□ 0.06
RPAIN-216ENST00000575599 DIS3LQ8TF46 1054 aaKnown RBP15.44■□□□□ 0.06
RPAIN-216ENST00000575599 TMEM87BQ96K49 555 aa15.44■□□□□ 0.06
RPAIN-216ENST00000575599 NEK1Q96PY6 1258 aa15.44■□□□□ 0.06
RPAIN-216ENST00000575599 PNMA2Q9UL42 364 aa15.44■□□□□ 0.06
RPAIN-216ENST00000575599 CNPY2Q9Y2B0 182 aa15.44■□□□□ 0.06
RPAIN-216ENST00000575599 PTPDC1A2A3K4 754 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 PALM3A6NDB9 673 aaPredicted RBP15.43■□□□□ 0.06
RPAIN-216ENST00000575599 CCDC69A6NI79 296 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 TROAPQ12815 778 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 QRICH1Q2TAL8 776 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 ADCK5Q3MIX3 580 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 FGD4Q96M96 766 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 TCEANC2Q96MN5 208 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 MTA3Q9BTC8 594 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 JMJD4Q9H9V9 463 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 CYP39A1Q9NYL5 469 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 OGDHLQ9ULD0 1010 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 MYH6P13533 1939 aa15.43■□□□□ 0.06
RPAIN-216ENST00000575599 SEPT4O43236 478 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 MSCO60682 206 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 EIF5BO60841 1220 aaKnown RBP15.42■□□□□ 0.06
RPAIN-216ENST00000575599 DDAH1O94760 285 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 CAPN2P17655 700 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 HSPA4P34932 840 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 KRT32Q14532 448 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 SLC30A10Q6XR72 485 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 ARMCX2Q7L311 632 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 UBE2Q1Q7Z7E8 422 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 ZNF467Q7Z7K2 595 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-216ENST00000575599 HOMER1Q86YM7 354 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 RAB11FIP4Q86YS3 637 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 MSL3Q8N5Y2 521 aaKnown RBP15.42■□□□□ 0.06
RPAIN-216ENST00000575599 FAM133AQ8N9E0 248 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 ANKLE1Q8NAG6 615 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 CTCFLQ8NI51 663 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-216ENST00000575599 CLEC4DQ8WXI8 215 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 PAWRQ96IZ0 340 aaKnown RBP15.42■□□□□ 0.06
RPAIN-216ENST00000575599 RTN4Q9NQC3 1192 aaKnown RBP15.42■□□□□ 0.06
RPAIN-216ENST00000575599 ZHX1Q9UKY1 873 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-216ENST00000575599 SYNGAP1Q96PV0 1343 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 LCTP09848 1927 aa15.42■□□□□ 0.06
RPAIN-216ENST00000575599 MCM3APO60318 1980 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 SOWAHBA6NEL2 793 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 RXRAP19793 462 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 CALML3P27482 149 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 BAATQ14032 418 aaPredicted RBP15.41■□□□□ 0.06
RPAIN-216ENST00000575599 TSGA10IPQ3SY00 556 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 MAMDC4Q6UXC1 1216 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 RNF207Q6ZRF8 634 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 FBXO11Q86XK2 927 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 CCDC144CPQ8IYA2 1237 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 TMTC2Q8N394 836 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 PURBQ96QR8 312 aaKnown RBP15.41■□□□□ 0.06
RPAIN-216ENST00000575599 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.41■□□□□ 0.06
RPAIN-216ENST00000575599 NRBP1Q9UHY1 535 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 ABCB11O95342 1321 aa15.41■□□□□ 0.06
RPAIN-216ENST00000575599 TNRC18O15417 2968 aaPredicted RBP15.41■□□□□ 0.06
RPAIN-216ENST00000575599 SNAI1O95863 264 aaPredicted RBP15.4■□□□□ 0.06
RPAIN-216ENST00000575599 LIFRP42702 1097 aa15.4■□□□□ 0.06
RPAIN-216ENST00000575599 MAMSTRQ6ZN01 415 aa15.4■□□□□ 0.06
RPAIN-216ENST00000575599 DHX32Q7L7V1 743 aaKnown RBP15.4■□□□□ 0.06
RPAIN-216ENST00000575599 NECAB2Q7Z6G3 386 aa15.4■□□□□ 0.06
RPAIN-216ENST00000575599 PIBF1Q8WXW3 757 aa15.4■□□□□ 0.06
RPAIN-216ENST00000575599 JAKMIP1Q96N16 626 aaKnown RBP15.4■□□□□ 0.06
RPAIN-216ENST00000575599 SNX14Q9Y5W7 946 aa15.4■□□□□ 0.06
RPAIN-216ENST00000575599 SLC12A7Q9Y666 1083 aa15.4■□□□□ 0.06
RPAIN-216ENST00000575599 DDX49Q9Y6V7 483 aaKnown RBP15.4■□□□□ 0.06
RPAIN-216ENST00000575599 ZBTB5O15062 677 aa15.39■□□□□ 0.05
RPAIN-216ENST00000575599 ZNF865P0CJ78 1059 aaPredicted RBP15.39■□□□□ 0.05
RPAIN-216ENST00000575599 AKR1A1P14550 325 aa15.39■□□□□ 0.05
RPAIN-216ENST00000575599 CPA1P15085 419 aa15.39■□□□□ 0.05
RPAIN-216ENST00000575599 KIF5BP33176 963 aa15.39■□□□□ 0.05
RPAIN-216ENST00000575599 MNX1P50219 401 aaPredicted RBP15.39■□□□□ 0.05
RPAIN-216ENST00000575599 RPS6P62753 249 aaKnown RBP15.39■□□□□ 0.05
RPAIN-216ENST00000575599 SLC35G1Q2M3R5 365 aa15.39■□□□□ 0.05
RPAIN-216ENST00000575599 MICU3Q86XE3 530 aa15.39■□□□□ 0.05
RPAIN-216ENST00000575599 KCNB2Q92953 911 aa15.39■□□□□ 0.05
RPAIN-216ENST00000575599 LENG1Q96BZ8 264 aaPredicted RBP15.39■□□□□ 0.05
RPAIN-216ENST00000575599 PIGSQ96S52 555 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms