RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 STAT2P52630 851 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 RABGGTBP53611 331 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 CNTN2Q02246 1040 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 SLFNL1Q499Z3 407 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 BRDTQ58F21 947 aaPredicted RBP10.72□□□□□ -0.69
SMG6-218ENST00000575454 SLFN13Q68D06 897 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 STAG1Q8WVM7 1258 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 ALDH8A1Q9H2A2 487 aaPredicted RBP10.72□□□□□ -0.69
SMG6-218ENST00000575454 A1CFQ9NQ94 594 aaKnown RBP10.72□□□□□ -0.69
SMG6-218ENST00000575454 RNF146Q9NTX7 359 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 POLR3EQ9NVU0 708 aa10.72□□□□□ -0.69
SMG6-218ENST00000575454 LOC102724159A0A0B4J2E5 919 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 A0A0G2JMZ2 1700 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.71□□□□□ -0.69
SMG6-218ENST00000575454 GSG1L2A8MUP6 293 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 TMEM232C9JQI7 657 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 ASTN1O14525 1302 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 GRIN2DO15399 1336 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 PLA2G6O60733 806 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 ZFYP08048 801 aaPredicted RBP10.71□□□□□ -0.69
SMG6-218ENST00000575454 TDO2P48775 406 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 TFF2Q03403 129 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 IKQ13123 557 aaPredicted RBP10.71□□□□□ -0.69
SMG6-218ENST00000575454 PWP2Q15269 919 aaKnown RBP10.71□□□□□ -0.69
SMG6-218ENST00000575454 LRRFIP1Q32MZ4 808 aaKnown RBP10.71□□□□□ -0.69
SMG6-218ENST00000575454 UMODL1Q5DID0 1318 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 TMEM31Q5JXX7 168 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 MUC6Q6W4X9 2439 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 CEP95Q96GE4 821 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 GMCL1Q96IK5 515 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 TRERF1Q96PN7 1200 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 SLC9A7Q96T83 725 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 NACAP1Q9BZK3 213 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 WNT8AQ9H1J5 351 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 VTA1Q9NP79 307 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 GPHNQ9NQX3 736 aaPredicted RBP10.71□□□□□ -0.69
SMG6-218ENST00000575454 ISY1Q9ULR0 285 aaKnown RBP10.71□□□□□ -0.69
SMG6-218ENST00000575454 MTCH2Q9Y6C9 303 aa10.71□□□□□ -0.69
SMG6-218ENST00000575454 SOWAHBA6NEL2 793 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 APPP05067 770 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 CA3P07451 260 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 TSPY3P0CV98 308 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 TSPY8P0CW00 308 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 MYOGP15173 224 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 SLC1A4P43007 532 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 CPT1AP50416 773 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 PDE4BQ07343 736 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 STK11IPQ8N1F8 1099 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 RETREG2Q8NC44 543 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 NEDD1Q8NHV4 660 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 PANK1Q8TE04 598 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 HLA-CQ95604 372 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 AGBL1Q96MI9 1066 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 NECAB3Q96P71 396 aaPredicted RBP10.7□□□□□ -0.7
SMG6-218ENST00000575454 ADD3Q9UEY8 706 aaKnown RBP10.7□□□□□ -0.7
SMG6-218ENST00000575454 DDX19BQ9UMR2 479 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 FOCADQ5VW36 1801 aa10.7□□□□□ -0.7
SMG6-218ENST00000575454 CACNA1AO00555 2505 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 TNKSO95271 1327 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 PATL2C9JE40 543 aaKnown RBP10.69□□□□□ -0.7
SMG6-218ENST00000575454 PITPNM1O00562 1244 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 KPNA6O60684 536 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 PRDM1O75626 825 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 CHGBP05060 677 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 ALAS1P13196 640 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 KCNQ1P51787 676 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 PSMC6P62333 389 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 TTLL4Q14679 1199 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 DUSP28Q4G0W2 176 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 TAPT1Q6NXT6 567 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 KIAA1211Q6ZU35 1233 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 FBXO16Q8IX29 292 aaPredicted RBP10.69□□□□□ -0.7
SMG6-218ENST00000575454 SIRT2Q8IXJ6 389 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 LRRC47Q8N1G4 583 aaKnown RBP10.69□□□□□ -0.7
SMG6-218ENST00000575454 KBTBD3Q8NAB2 608 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 MORC4Q8TE76 937 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 APPBP2Q92624 585 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 SCLYQ96I15 445 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 GPATCH3Q96I76 525 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 MPHOSPH6Q99547 160 aaKnown RBP10.69□□□□□ -0.7
SMG6-218ENST00000575454 LRFN3Q9BTN0 628 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 LRRCC1Q9C099 1032 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 ECHDC1Q9NTX5 307 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 ZBTB40Q9NUA8 1239 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 CYP39A1Q9NYL5 469 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 TRANK1O15050 2925 aa10.69□□□□□ -0.7
SMG6-218ENST00000575454 FRMPD3Q5JV73 1810 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 ZNF536O15090 1300 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 RAD50Q92878 1312 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 RNF113AO15541 343 aaKnown RBP10.68□□□□□ -0.7
SMG6-218ENST00000575454 GPAA1O43292 621 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 TLL1O43897 1013 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 BAIAP3O94812 1187 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 PTPN11Q06124 597 aaPredicted RBP10.68□□□□□ -0.7
SMG6-218ENST00000575454 BFSP2Q13515 415 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 RCSD1Q6JBY9 416 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 EEPD1Q7L9B9 569 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 DEFB128Q7Z7B8 93 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 ARNTL2Q8WYA1 636 aa10.68□□□□□ -0.7
SMG6-218ENST00000575454 OSBP2Q969R2 916 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms