RNA–Protein interactions for RNA: ENST00000575313.1

CLDN7-208, Transcript of claudin 7, humanhuman

TSL 3

Gene CLDN7, Length 605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-208ENST00000575313 STK3Q13188 491 aa20.72■□□□□ 0.91
CLDN7-208ENST00000575313 ME3Q16798 604 aa20.72■□□□□ 0.91
CLDN7-208ENST00000575313 SH3TC2Q8TF17 1288 aa20.72■□□□□ 0.91
CLDN7-208ENST00000575313 RIOX1Q9H6W3 641 aa20.72■□□□□ 0.91
CLDN7-208ENST00000575313 RBM28Q9NW13 759 aaKnown RBP20.72■□□□□ 0.91
CLDN7-208ENST00000575313 BIN2Q9UBW5 565 aaPredicted RBP20.72■□□□□ 0.91
CLDN7-208ENST00000575313 LARGE1O95461 756 aa20.71■□□□□ 0.91
CLDN7-208ENST00000575313 HMGCRP04035 888 aa20.71■□□□□ 0.91
CLDN7-208ENST00000575313 ELNP15502 786 aa20.71■□□□□ 0.91
CLDN7-208ENST00000575313 UBXN2AP68543 259 aa20.71■□□□□ 0.91
CLDN7-208ENST00000575313 TRAF1Q13077 416 aa20.71■□□□□ 0.91
CLDN7-208ENST00000575313 QRICH1Q2TAL8 776 aa20.71■□□□□ 0.91
CLDN7-208ENST00000575313 ANKRD35Q8N283 1001 aa20.71■□□□□ 0.91
CLDN7-208ENST00000575313 MTMR8Q96EF0 704 aa20.71■□□□□ 0.91
CLDN7-208ENST00000575313 DDX11Q96FC9 970 aa20.71■□□□□ 0.91
CLDN7-208ENST00000575313 TMX3Q96JJ7 454 aa20.71■□□□□ 0.91
CLDN7-208ENST00000575313 SPZ1Q9BXG8 430 aa20.71■□□□□ 0.91
CLDN7-208ENST00000575313 K7ELQ4 463 aaPredicted RBP20.7■□□□□ 0.9
CLDN7-208ENST00000575313 ZBTB5O15062 677 aa20.7■□□□□ 0.9
CLDN7-208ENST00000575313 PFKFB2O60825 505 aa20.7■□□□□ 0.9
CLDN7-208ENST00000575313 RXRAP19793 462 aa20.7■□□□□ 0.9
CLDN7-208ENST00000575313 PPP2R5BQ15173 497 aa20.7■□□□□ 0.9
CLDN7-208ENST00000575313 FBXO11Q86XK2 927 aa20.7■□□□□ 0.9
CLDN7-208ENST00000575313 CCDC144CPQ8IYA2 1237 aa20.7■□□□□ 0.9
CLDN7-208ENST00000575313 ZNF333Q96JL9 665 aa20.7■□□□□ 0.9
CLDN7-208ENST00000575313 AMNQ9BXJ7 453 aa20.7■□□□□ 0.9
CLDN7-208ENST00000575313 SLKQ9H2G2 1235 aaPredicted RBP20.7■□□□□ 0.9
CLDN7-208ENST00000575313 SH2B1Q9NRF2 756 aaPredicted RBP20.7■□□□□ 0.9
CLDN7-208ENST00000575313 DIS3Q9Y2L1 958 aaKnown RBP20.7■□□□□ 0.9
CLDN7-208ENST00000575313 PFASO15067 1338 aa20.7■□□□□ 0.9
CLDN7-208ENST00000575313 GOLGA8AA7E2F4 631 aa20.69■□□□□ 0.9
CLDN7-208ENST00000575313 CYTH3O43739 400 aa20.69■□□□□ 0.9
CLDN7-208ENST00000575313 COBLO75128 1261 aa20.69■□□□□ 0.9
CLDN7-208ENST00000575313 METAP2P50579 478 aaKnown RBP eCLIP20.69■□□□□ 0.9
CLDN7-208ENST00000575313 CCT2P78371 535 aaKnown RBP20.69■□□□□ 0.9
CLDN7-208ENST00000575313 BECN1Q14457 450 aa20.69■□□□□ 0.9
CLDN7-208ENST00000575313 RTN1Q16799 776 aa20.69■□□□□ 0.9
CLDN7-208ENST00000575313 NECAB1Q8N987 351 aa20.69■□□□□ 0.9
CLDN7-208ENST00000575313 TRIB2Q92519 343 aa20.69■□□□□ 0.9
CLDN7-208ENST00000575313 MAF1Q9H063 256 aa20.69■□□□□ 0.9
CLDN7-208ENST00000575313 ABCB11O95342 1321 aa20.69■□□□□ 0.9
CLDN7-208ENST00000575313 DNAJC25-GNG10A0A024R161 153 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 PNMA6FA0A0J9YX94 578 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 CCDC196A0A1B0GTZ2 297 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 INHAP05111 366 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 PGK2P07205 417 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 SLC35G1Q2M3R5 365 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 USH1GQ495M9 461 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 MUM1L1Q5H9M0 696 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 OLFML2BQ68BL8 750 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 TMTC3Q6ZXV5 915 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 HOMER1Q86YM7 354 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 NPLOC4Q8TAT6 608 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 RRP36Q96EU6 259 aaKnown RBP20.68■□□□□ 0.9
CLDN7-208ENST00000575313 PIGSQ96S52 555 aa20.68■□□□□ 0.9
CLDN7-208ENST00000575313 A1CFQ9NQ94 594 aaKnown RBP20.68■□□□□ 0.9
CLDN7-208ENST00000575313 CCDC85CA6NKD9 419 aa20.67■□□□□ 0.9
CLDN7-208ENST00000575313 PLEKHA8P1O95397 391 aa20.67■□□□□ 0.9
CLDN7-208ENST00000575313 CCL14Q16627 93 aa20.67■□□□□ 0.9
CLDN7-208ENST00000575313 ZNF792Q3KQV3 632 aa20.67■□□□□ 0.9
CLDN7-208ENST00000575313 MFSD14CQ5VZR4 134 aa20.67■□□□□ 0.9
CLDN7-208ENST00000575313 SRBD1Q8N5C6 995 aaKnown RBP20.67■□□□□ 0.9
CLDN7-208ENST00000575313 MAML3Q96JK9 1138 aa20.67■□□□□ 0.9
CLDN7-208ENST00000575313 NCOA5Q9HCD5 579 aaKnown RBP20.67■□□□□ 0.9
CLDN7-208ENST00000575313 SEC63Q9UGP8 760 aaKnown RBP20.67■□□□□ 0.9
CLDN7-208ENST00000575313 MRPL11Q9Y3B7 192 aaKnown RBP20.67■□□□□ 0.9
CLDN7-208ENST00000575313 NID2Q14112 1375 aa20.67■□□□□ 0.9
CLDN7-208ENST00000575313 HTTP42858 3142 aa20.67■□□□□ 0.9
CLDN7-208ENST00000575313 POTEB2H3BUK9 544 aa20.66■□□□□ 0.9
CLDN7-208ENST00000575313 TAL1P17542 331 aaPredicted RBP20.66■□□□□ 0.9
CLDN7-208ENST00000575313 CDC27P30260 824 aa20.66■□□□□ 0.9
CLDN7-208ENST00000575313 ADD1P35611 737 aaKnown RBP20.66■□□□□ 0.9
CLDN7-208ENST00000575313 SCRN1Q12765 414 aa20.66■□□□□ 0.9
CLDN7-208ENST00000575313 NSMFQ6X4W1 530 aa20.66■□□□□ 0.9
CLDN7-208ENST00000575313 CCDC83Q8IWF9 413 aa20.66■□□□□ 0.9
CLDN7-208ENST00000575313 RGS22Q8NE09 1264 aa20.66■□□□□ 0.9
CLDN7-208ENST00000575313 CLEC4DQ8WXI8 215 aa20.66■□□□□ 0.9
CLDN7-208ENST00000575313 GTF3C6Q969F1 213 aa20.66■□□□□ 0.9
CLDN7-208ENST00000575313 FAM217BQ9NTX9 383 aaPredicted RBP20.66■□□□□ 0.9
CLDN7-208ENST00000575313 CYP39A1Q9NYL5 469 aa20.66■□□□□ 0.9
CLDN7-208ENST00000575313 NFIBO00712 420 aa20.65■□□□□ 0.9
CLDN7-208ENST00000575313 ZNF467Q7Z7K2 595 aaPredicted RBP20.65■□□□□ 0.9
CLDN7-208ENST00000575313 MCF2L2Q86YR7 1114 aa20.65■□□□□ 0.9
CLDN7-208ENST00000575313 MSL3Q8N5Y2 521 aaKnown RBP20.65■□□□□ 0.9
CLDN7-208ENST00000575313 FLRT1Q9NZU1 646 aa20.65■□□□□ 0.9
CLDN7-208ENST00000575313 PCDHA1Q9Y5I3 950 aa20.65■□□□□ 0.9
CLDN7-208ENST00000575313 ZNFX1Q9P2E3 1918 aaKnown RBP20.65■□□□□ 0.9
CLDN7-208ENST00000575313 PPP1R11O60927 126 aaPredicted RBP20.64■□□□□ 0.89
CLDN7-208ENST00000575313 IGHA2P01877 340 aa20.64■□□□□ 0.89
CLDN7-208ENST00000575313 ST3GAL1Q11201 340 aa20.64■□□□□ 0.89
CLDN7-208ENST00000575313 CUL4AQ13619 759 aa20.64■□□□□ 0.89
CLDN7-208ENST00000575313 MAP3K21Q5TCX8 1036 aa20.64■□□□□ 0.89
CLDN7-208ENST00000575313 RNF207Q6ZRF8 634 aa20.64■□□□□ 0.89
CLDN7-208ENST00000575313 CMTR1Q8N1G2 835 aaKnown RBP20.64■□□□□ 0.89
CLDN7-208ENST00000575313 FAM133AQ8N9E0 248 aa20.64■□□□□ 0.89
CLDN7-208ENST00000575313 TMEM106CQ9BVX2 250 aa20.64■□□□□ 0.89
CLDN7-208ENST00000575313 MYH6P13533 1939 aa20.63■□□□□ 0.89
CLDN7-208ENST00000575313 RPTORQ8N122 1335 aa20.63■□□□□ 0.89
CLDN7-208ENST00000575313 PTPDC1A2A3K4 754 aa20.63■□□□□ 0.89
CLDN7-208ENST00000575313 CCL5P13501 91 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms