RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 ZNF384Q8TF68 577 aa16.61■□□□□ 0.25
ABR-228ENST00000574437 NOC4LQ9BVI4 516 aaKnown RBP16.61■□□□□ 0.25
ABR-228ENST00000574437 CRNKL1Q9BZJ0 848 aaKnown RBP16.61■□□□□ 0.25
ABR-228ENST00000574437 MCM9Q9NXL9 1143 aa16.61■□□□□ 0.25
ABR-228ENST00000574437 TFCP2L1Q9NZI6 479 aa16.61■□□□□ 0.25
ABR-228ENST00000574437 ASIC1P78348 528 aa16.61■□□□□ 0.25
ABR-228ENST00000574437 SPA17Q15506 151 aa16.61■□□□□ 0.25
ABR-228ENST00000574437 PLCD3Q8N3E9 789 aa16.61■□□□□ 0.25
ABR-228ENST00000574437 ZNF507Q8TCN5 953 aa16.61■□□□□ 0.25
ABR-228ENST00000574437 CCDC42Q96M95 316 aa16.61■□□□□ 0.25
ABR-228ENST00000574437 DCP1AQ9NPI6 582 aaPredicted RBP16.61■□□□□ 0.25
ABR-228ENST00000574437 CCNL1Q9UK58 526 aaPredicted RBP16.61■□□□□ 0.25
ABR-228ENST00000574437 BAZ2AQ9UIF9 1905 aaKnown RBP16.61■□□□□ 0.25
ABR-228ENST00000574437 A0A1W2PQC6 194 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 GNPATO15228 680 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 CCDC70Q6NSX1 233 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 MSL3Q8N5Y2 521 aaKnown RBP16.6■□□□□ 0.25
ABR-228ENST00000574437 COG1Q8WTW3 980 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 HPS3Q969F9 1004 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 CNOT6LQ96LI5 555 aaKnown RBP16.6■□□□□ 0.25
ABR-228ENST00000574437 SELENOOQ9BVL4 669 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 THAP9Q9H5L6 903 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 LRWD1Q9UFC0 647 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 PDS5AQ29RF7 1337 aaKnown RBP16.6■□□□□ 0.25
ABR-228ENST00000574437 TFAP4Q01664 338 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 MECOMQ03112 1051 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 PAPD7Q5XG87 772 aaKnown RBP16.6■□□□□ 0.25
ABR-228ENST00000574437 C4orf32Q8N8J7 132 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 CCDC47Q96A33 483 aaKnown RBP16.6■□□□□ 0.25
ABR-228ENST00000574437 MKRN1Q9UHC7 482 aaKnown RBP16.6■□□□□ 0.25
ABR-228ENST00000574437 PCDHA4Q9UN74 947 aa16.6■□□□□ 0.25
ABR-228ENST00000574437 EIF3CLB5ME19 914 aaKnown RBP16.59■□□□□ 0.25
ABR-228ENST00000574437 PLEKP08567 350 aaPredicted RBP16.59■□□□□ 0.25
ABR-228ENST00000574437 PARP10Q53GL7 1025 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 TYW1BQ6NUM6 668 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 SECISBP2LQ93073 1101 aaKnown RBP16.59■□□□□ 0.25
ABR-228ENST00000574437 EIF3CQ99613 913 aaKnown RBP16.59■□□□□ 0.25
ABR-228ENST00000574437 DEF6Q9H4E7 631 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 USP17L8P0C7I0 530 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 KLRK1P26718 216 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 PRDX5P30044 214 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 TTI2Q6NXR4 508 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 C3orf67Q6ZVT6 689 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 PNMA1Q8ND90 353 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 FAM84BQ96KN1 310 aaPredicted RBP16.59■□□□□ 0.25
ABR-228ENST00000574437 NUP98P52948 1817 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 NTSR2O95665 410 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 SRGNP10124 158 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 CXCR5P32302 372 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 DNAJC21Q5F1R6 531 aaKnown RBP16.59■□□□□ 0.25
ABR-228ENST00000574437 ANKRD40Q6AI12 368 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.59■□□□□ 0.25
ABR-228ENST00000574437 SND1Q7KZF4 910 aaKnown RBP eCLIP16.59■□□□□ 0.25
ABR-228ENST00000574437 CPVLQ9H3G5 476 aa16.59■□□□□ 0.25
ABR-228ENST00000574437 WNK3Q9BYP7 1800 aa16.58■□□□□ 0.25
ABR-228ENST00000574437 KLRC4O43908 158 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 FCER1AP12319 257 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 PLCG1P19174 1290 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 EZH2Q15910 746 aaKnown RBP16.58■□□□□ 0.24
ABR-228ENST00000574437 DUSP9Q99956 384 aaKnown RBP16.58■□□□□ 0.24
ABR-228ENST00000574437 FAM207AQ9NSI2 230 aaPredicted RBP16.58■□□□□ 0.24
ABR-228ENST00000574437 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.58■□□□□ 0.24
ABR-228ENST00000574437 GOLGA6BA6NDN3 693 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 GOLGA8HP0CJ92 632 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 ZBED6P86452 979 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 SLC7A5Q01650 507 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 STK4Q13043 487 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 LETM2Q2VYF4 491 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 ANKRD13CQ8N6S4 541 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 GIMAP8Q8ND71 665 aaPredicted RBP16.58■□□□□ 0.24
ABR-228ENST00000574437 P2RX5Q93086 422 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 DYNLL2Q96FJ2 89 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 VIPAS39Q9H9C1 493 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 MLXIPQ9HAP2 919 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 TCP11L1Q9NUJ3 509 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 SMARCAL1Q9NZC9 954 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 STX8Q9UNK0 236 aa16.58■□□□□ 0.24
ABR-228ENST00000574437 NKRFO15226 690 aaKnown RBP eCLIP16.57■□□□□ 0.24
ABR-228ENST00000574437 DNA2P51530 1060 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 NAP1L1P55209 391 aaKnown RBP16.57■□□□□ 0.24
ABR-228ENST00000574437 ERFEQ4G0M1 354 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 TBC1D9BQ66K14 1250 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 CABP7Q86V35 215 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 C2CD5Q86YS7 1000 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 NSUN4Q96CB9 384 aaKnown RBP16.57■□□□□ 0.24
ABR-228ENST00000574437 RPGRIP1Q96KN7 1286 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 MMRN2Q9H8L6 949 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 RHOBTB3O94955 611 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 PCP11498 1178 aaKnown RBP16.57■□□□□ 0.24
ABR-228ENST00000574437 UBE4AQ14139 1066 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 CCNI2Q6ZMN8 369 aaPredicted RBP16.57■□□□□ 0.24
ABR-228ENST00000574437 FAM76AQ8TAV0 307 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 NUP58Q9BVL2 599 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 MKNK2Q9HBH9 465 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 ZNF804BA4D1E1 1349 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 GOLGA6CA6NDK9 693 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 ORC4O43929 436 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 USO1O60763 962 aaKnown RBP16.57■□□□□ 0.24
ABR-228ENST00000574437 MOCS3O95396 460 aa16.57■□□□□ 0.24
ABR-228ENST00000574437 GOLGA6DP0CG33 693 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms