RNA–Protein interactions for RNA: ENST00000574070.5

CLDN7-207, Transcript of claudin 7, humanhuman

TSL 1 (best)

Gene CLDN7, Length 485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-207ENST00000574070 MAP3K14Q99558 947 aa20.07■□□□□ 0.8
CLDN7-207ENST00000574070 HMX1Q9NP08 348 aaPredicted RBP20.07■□□□□ 0.8
CLDN7-207ENST00000574070 ZNF236Q9UL36 1845 aa20.06■□□□□ 0.8
CLDN7-207ENST00000574070 KLF18A0A0U1RQI7 1052 aa20.06■□□□□ 0.8
CLDN7-207ENST00000574070 POTEB2H3BUK9 544 aa20.06■□□□□ 0.8
CLDN7-207ENST00000574070 GNAQP50148 359 aa20.06■□□□□ 0.8
CLDN7-207ENST00000574070 FBXO11Q86XK2 927 aa20.06■□□□□ 0.8
CLDN7-207ENST00000574070 PIBF1Q8WXW3 757 aa20.06■□□□□ 0.8
CLDN7-207ENST00000574070 MAML3Q96JK9 1138 aa20.06■□□□□ 0.8
CLDN7-207ENST00000574070 CYP46A1Q9Y6A2 500 aa20.06■□□□□ 0.8
CLDN7-207ENST00000574070 RPTORQ8N122 1335 aa20.05■□□□□ 0.8
CLDN7-207ENST00000574070 CUL9Q8IWT3 2517 aa20.05■□□□□ 0.8
CLDN7-207ENST00000574070 ZBTB43O43298 467 aa20.05■□□□□ 0.8
CLDN7-207ENST00000574070 CYP2C19P33261 490 aa20.05■□□□□ 0.8
CLDN7-207ENST00000574070 CACNB2Q08289 660 aaPredicted RBP20.05■□□□□ 0.8
CLDN7-207ENST00000574070 ZNF792Q3KQV3 632 aa20.05■□□□□ 0.8
CLDN7-207ENST00000574070 OLFML2BQ68BL8 750 aa20.05■□□□□ 0.8
CLDN7-207ENST00000574070 RUFY3Q7L099 469 aa20.05■□□□□ 0.8
CLDN7-207ENST00000574070 BRF1Q92994 677 aa20.05■□□□□ 0.8
CLDN7-207ENST00000574070 PIGSQ96S52 555 aa20.05■□□□□ 0.8
CLDN7-207ENST00000574070 LZTS2Q9BRK4 669 aa20.05■□□□□ 0.8
CLDN7-207ENST00000574070 A1CFQ9NQ94 594 aaKnown RBP20.05■□□□□ 0.8
CLDN7-207ENST00000574070 DIS3Q9Y2L1 958 aaKnown RBP20.05■□□□□ 0.8
CLDN7-207ENST00000574070 PFASO15067 1338 aa20.04■□□□□ 0.8
CLDN7-207ENST00000574070 ZNFX1Q9P2E3 1918 aaKnown RBP20.04■□□□□ 0.8
CLDN7-207ENST00000574070 PTPDC1A2A3K4 754 aa20.04■□□□□ 0.8
CLDN7-207ENST00000574070 SEC24BO95487 1268 aa20.04■□□□□ 0.8
CLDN7-207ENST00000574070 APOA5Q6Q788 366 aa20.04■□□□□ 0.8
CLDN7-207ENST00000574070 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.04■□□□□ 0.8
CLDN7-207ENST00000574070 FANCBQ8NB91 859 aa20.04■□□□□ 0.8
CLDN7-207ENST00000574070 AMNQ9BXJ7 453 aa20.04■□□□□ 0.8
CLDN7-207ENST00000574070 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.04■□□□□ 0.8
CLDN7-207ENST00000574070 ZSWIM6Q9HCJ5 1215 aa20.04■□□□□ 0.8
CLDN7-207ENST00000574070 BRPF3Q9ULD4 1205 aa20.04■□□□□ 0.8
CLDN7-207ENST00000574070 SZT2Q5T011 3432 aa20.04■□□□□ 0.8
CLDN7-207ENST00000574070 ABCB11O95342 1321 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 GOLGA8AA7E2F4 631 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 GOLGA8BA8MQT2 603 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 NFIBO00712 420 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 ZBTB5O15062 677 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 PLEKHA8P1O95397 391 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 CNGA1P29973 690 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 APOBRQ0VD83 1088 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 RTN1Q16799 776 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 CHRDL2Q6WN34 429 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 CMTR1Q8N1G2 835 aaKnown RBP20.03■□□□□ 0.8
CLDN7-207ENST00000574070 DEFB118Q96PH6 123 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 UPF3BQ9BZI7 483 aaKnown RBP20.03■□□□□ 0.8
CLDN7-207ENST00000574070 TM6SF1Q9BZW5 370 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 RIOX1Q9H6W3 641 aa20.03■□□□□ 0.8
CLDN7-207ENST00000574070 RBM28Q9NW13 759 aaKnown RBP20.03■□□□□ 0.8
CLDN7-207ENST00000574070 MRPL11Q9Y3B7 192 aaKnown RBP20.03■□□□□ 0.8
CLDN7-207ENST00000574070 CYTH3O43739 400 aa20.02■□□□□ 0.8
CLDN7-207ENST00000574070 GJB1P08034 283 aa20.02■□□□□ 0.8
CLDN7-207ENST00000574070 CALML3P27482 149 aa20.02■□□□□ 0.8
CLDN7-207ENST00000574070 CCND3P30281 292 aaPredicted RBP20.02■□□□□ 0.8
CLDN7-207ENST00000574070 BAATQ14032 418 aaPredicted RBP20.02■□□□□ 0.8
CLDN7-207ENST00000574070 C8orf34Q49A92 452 aa20.02■□□□□ 0.8
CLDN7-207ENST00000574070 RNF207Q6ZRF8 634 aa20.02■□□□□ 0.8
CLDN7-207ENST00000574070 CCDC82Q8N4S0 544 aa20.02■□□□□ 0.8
CLDN7-207ENST00000574070 RRP36Q96EU6 259 aaKnown RBP20.02■□□□□ 0.8
CLDN7-207ENST00000574070 TINF2Q9BSI4 451 aa20.02■□□□□ 0.8
CLDN7-207ENST00000574070 CYP39A1Q9NYL5 469 aa20.02■□□□□ 0.8
CLDN7-207ENST00000574070 SEC63Q9UGP8 760 aaKnown RBP20.02■□□□□ 0.8
CLDN7-207ENST00000574070 DNAJC25-GNG10A0A024R161 153 aa20.01■□□□□ 0.79
CLDN7-207ENST00000574070 ANAPC15P60006 121 aa20.01■□□□□ 0.79
CLDN7-207ENST00000574070 CNTN2Q02246 1040 aa20.01■□□□□ 0.79
CLDN7-207ENST00000574070 TRAF1Q13077 416 aa20.01■□□□□ 0.79
CLDN7-207ENST00000574070 MAP3K21Q5TCX8 1036 aa20.01■□□□□ 0.79
CLDN7-207ENST00000574070 SRBD1Q8N5C6 995 aaKnown RBP20.01■□□□□ 0.79
CLDN7-207ENST00000574070 CLEC4DQ8WXI8 215 aa20.01■□□□□ 0.79
CLDN7-207ENST00000574070 DPF3Q92784 378 aa20.01■□□□□ 0.79
CLDN7-207ENST00000574070 MTMR8Q96EF0 704 aa20.01■□□□□ 0.79
CLDN7-207ENST00000574070 SPZ1Q9BXG8 430 aa20.01■□□□□ 0.79
CLDN7-207ENST00000574070 PDRG1Q9NUG6 133 aa20.01■□□□□ 0.79
CLDN7-207ENST00000574070 PCDHA1Q9Y5I3 950 aa20.01■□□□□ 0.79
CLDN7-207ENST00000574070 PNMA6FA0A0J9YX94 578 aa20■□□□□ 0.79
CLDN7-207ENST00000574070 TFRCP02786 760 aaKnown RBP20■□□□□ 0.79
CLDN7-207ENST00000574070 SMARCA1P28370 1054 aa20■□□□□ 0.79
CLDN7-207ENST00000574070 METAP2P50579 478 aaKnown RBP eCLIP20■□□□□ 0.79
CLDN7-207ENST00000574070 SLC35G1Q2M3R5 365 aa20■□□□□ 0.79
CLDN7-207ENST00000574070 PRAMEF19Q5SWL8 479 aa20■□□□□ 0.79
CLDN7-207ENST00000574070 TMTC3Q6ZXV5 915 aa20■□□□□ 0.79
CLDN7-207ENST00000574070 MCF2L2Q86YR7 1114 aa20■□□□□ 0.79
CLDN7-207ENST00000574070 FAM133AQ8N9E0 248 aa20■□□□□ 0.79
CLDN7-207ENST00000574070 U2AF1L4Q8WU68 220 aaKnown RBP20■□□□□ 0.79
CLDN7-207ENST00000574070 PAK6Q9NQU5 681 aaPredicted RBP20■□□□□ 0.79
CLDN7-207ENST00000574070 CNPY2Q9Y2B0 182 aa20■□□□□ 0.79
CLDN7-207ENST00000574070 PLXNA1Q9UIW2 1896 aa20■□□□□ 0.79
CLDN7-207ENST00000574070 MYH6P13533 1939 aa20■□□□□ 0.79
CLDN7-207ENST00000574070 RANBP2P49792 3224 aaKnown RBP19.99■□□□□ 0.79
CLDN7-207ENST00000574070 SGPL1O95470 568 aa19.99■□□□□ 0.79
CLDN7-207ENST00000574070 SLC30A10Q6XR72 485 aa19.99■□□□□ 0.79
CLDN7-207ENST00000574070 ZNF467Q7Z7K2 595 aaPredicted RBP19.99■□□□□ 0.79
CLDN7-207ENST00000574070 MSL3Q8N5Y2 521 aaKnown RBP19.99■□□□□ 0.79
CLDN7-207ENST00000574070 ADD3Q9UEY8 706 aaKnown RBP19.99■□□□□ 0.79
CLDN7-207ENST00000574070 SMCHD1A6NHR9 2005 aa19.98■□□□□ 0.79
CLDN7-207ENST00000574070 SOWAHBA6NEL2 793 aa19.98■□□□□ 0.79
CLDN7-207ENST00000574070 ASB14A6NK59 587 aa19.98■□□□□ 0.79
CLDN7-207ENST00000574070 PPP1R11O60927 126 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms