RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 ZMYND12Q9H0C1 365 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 FANCLQ9NW38 375 aa18.02■□□□□ 0.48
USP43-204ENST00000573955 CFAP100Q494V2 611 aa18.02■□□□□ 0.47
USP43-204ENST00000573955 PRMT6Q96LA8 375 aaPredicted RBP18.02■□□□□ 0.47
USP43-204ENST00000573955 C6orf50Q9HD87 102 aa18.02■□□□□ 0.47
USP43-204ENST00000573955 KIF1CO43896 1103 aaKnown RBP18.01■□□□□ 0.47
USP43-204ENST00000573955 FMR1Q06787 632 aaKnown RBP eCLIP18.01■□□□□ 0.47
USP43-204ENST00000573955 TEX35Q5T0J7 233 aa18.01■□□□□ 0.47
USP43-204ENST00000573955 KANK3Q6NY19 840 aa18.01■□□□□ 0.47
USP43-204ENST00000573955 SMYD4Q8IYR2 804 aaPredicted RBP18.01■□□□□ 0.47
USP43-204ENST00000573955 DAGLBQ8NCG7 672 aa18.01■□□□□ 0.47
USP43-204ENST00000573955 CCNT1O60563 726 aaKnown RBP18.01■□□□□ 0.47
USP43-204ENST00000573955 SARSP49591 514 aaKnown RBP18.01■□□□□ 0.47
USP43-204ENST00000573955 FANCCQ00597 558 aa18.01■□□□□ 0.47
USP43-204ENST00000573955 KARSQ15046 597 aaKnown RBP18.01■□□□□ 0.47
USP43-204ENST00000573955 KLHL10Q6JEL2 608 aa18.01■□□□□ 0.47
USP43-204ENST00000573955 RASSF8Q8NHQ8 419 aa18.01■□□□□ 0.47
USP43-204ENST00000573955 CCDC12Q8WUD4 166 aaPredicted RBP18.01■□□□□ 0.47
USP43-204ENST00000573955 RIOX1Q9H6W3 641 aa18.01■□□□□ 0.47
USP43-204ENST00000573955 IKBKBO14920 756 aa18■□□□□ 0.47
USP43-204ENST00000573955 MORC3Q14149 939 aa18■□□□□ 0.47
USP43-204ENST00000573955 CERKLQ49MI3 558 aaPredicted RBP18■□□□□ 0.47
USP43-204ENST00000573955 ASPRV1Q53RT3 343 aa18■□□□□ 0.47
USP43-204ENST00000573955 C10orf71Q711Q0 1435 aa18■□□□□ 0.47
USP43-204ENST00000573955 TMC6Q7Z403 805 aa18■□□□□ 0.47
USP43-204ENST00000573955 ADGRF4Q8IZF3 695 aa18■□□□□ 0.47
USP43-204ENST00000573955 DPF2Q92785 391 aa18■□□□□ 0.47
USP43-204ENST00000573955 DEF6Q9H4E7 631 aa18■□□□□ 0.47
USP43-204ENST00000573955 CWC15Q9P013 229 aaKnown RBP18■□□□□ 0.47
USP43-204ENST00000573955 PI4KBQ9UBF8 816 aa18■□□□□ 0.47
USP43-204ENST00000573955 PAXBP1Q9Y5B6 917 aa18■□□□□ 0.47
USP43-204ENST00000573955 CLRN2A0PK11 232 aa18■□□□□ 0.47
USP43-204ENST00000573955 SERPINC1P01008 464 aa18■□□□□ 0.47
USP43-204ENST00000573955 ZNF543Q08ER8 600 aa18■□□□□ 0.47
USP43-204ENST00000573955 GALNT17Q6IS24 598 aa18■□□□□ 0.47
USP43-204ENST00000573955 SERPINA10Q9UK55 444 aa18■□□□□ 0.47
USP43-204ENST00000573955 GNA11P29992 359 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 SEPT2Q15019 361 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 NONOQ15233 471 aaKnown RBP eCLIP17.99■□□□□ 0.47
USP43-204ENST00000573955 NT5DC1Q5TFE4 455 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 DTHD1Q6ZMT9 781 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 ELOA2Q8IYF1 753 aaPredicted RBP17.99■□□□□ 0.47
USP43-204ENST00000573955 LARGE2Q8N3Y3 721 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 MNS1Q8NEH6 495 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 NEK11Q8NG66 645 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 CXorf56Q9H5V9 222 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 COL4A5P29400 1685 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 TCP10L2B9ZVM9 353 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 USP17L10C9JJH3 530 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 EEF2P13639 858 aaKnown RBP17.99■□□□□ 0.47
USP43-204ENST00000573955 CCDC91Q7Z6B0 441 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 REXO1Q8N1G1 1221 aaKnown RBP17.99■□□□□ 0.47
USP43-204ENST00000573955 TBCKQ8TEA7 893 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 IDI2Q9BXS1 227 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 DHX36Q9H2U1 1008 aaKnown RBP17.99■□□□□ 0.47
USP43-204ENST00000573955 JMJD4Q9H9V9 463 aa17.99■□□□□ 0.47
USP43-204ENST00000573955 COBLO75128 1261 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 SNHG28P0DPA3 235 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 STX17P56962 302 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 IQUBQ8NA54 791 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 SUPT20HQ8NEM7 779 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 PLCD4Q9BRC7 762 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 EHD4Q9H223 541 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 SHTN1A0MZ66 631 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 PPP1R11O60927 126 aaPredicted RBP17.98■□□□□ 0.47
USP43-204ENST00000573955 FKBP1AP62942 108 aaKnown RBP17.98■□□□□ 0.47
USP43-204ENST00000573955 BMS1Q14692 1282 aaKnown RBP17.98■□□□□ 0.47
USP43-204ENST00000573955 E2F4Q16254 413 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 ARL6IP4Q66PJ3 421 aaKnown RBP17.98■□□□□ 0.47
USP43-204ENST00000573955 KRT25Q7Z3Z0 450 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 LRRC8AQ8IWT6 810 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 CCDC34Q96HJ3 373 aa17.98■□□□□ 0.47
USP43-204ENST00000573955 IRF6O14896 467 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 HDLBPQ00341 1268 aaKnown RBP17.97■□□□□ 0.47
USP43-204ENST00000573955 UBE2SQ16763 222 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 CCDC93Q567U6 631 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 SH3RF1Q7Z6J0 888 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 MTRQ99707 1265 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 LCMT1Q9UIC8 334 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 NFE2L3Q9Y4A8 694 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 MYH4Q9Y623 1939 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 PSMD14O00487 310 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 LONP1P36776 959 aaKnown RBP17.97■□□□□ 0.47
USP43-204ENST00000573955 UBASH3AP57075 661 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 DPYDQ12882 1025 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 CUL4BQ13620 913 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 MLKLQ8NB16 471 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 SPATA20Q8TB22 786 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 MRIQ9BWK5 157 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 SUFUQ9UMX1 484 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 BCS1LQ9Y276 419 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 MYO3BQ8WXR4 1341 aa17.97■□□□□ 0.47
USP43-204ENST00000573955 CD44P16070 742 aaKnown RBP17.96■□□□□ 0.47
USP43-204ENST00000573955 SMARCA1P28370 1054 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 TXLNAP40222 546 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 STAT6P42226 847 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 ADCY7P51828 1080 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 SNAP25P60880 206 aa17.96■□□□□ 0.47
USP43-204ENST00000573955 MAP2K1Q02750 393 aaPredicted RBP17.96■□□□□ 0.47
USP43-204ENST00000573955 NEK8Q86SG6 692 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms