RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 SYNRGQ9UMZ2 1314 aa13.83□□□□□ -0.2
NDE1-206ENST00000572967 ALAS1P13196 640 aa13.82□□□□□ -0.2
NDE1-206ENST00000572967 ADCYAP1R1P41586 468 aa13.82□□□□□ -0.2
NDE1-206ENST00000572967 TRIM60Q495X7 471 aa13.82□□□□□ -0.2
NDE1-206ENST00000572967 DHX32Q7L7V1 743 aaKnown RBP13.82□□□□□ -0.2
NDE1-206ENST00000572967 RASEFQ8IZ41 740 aa13.82□□□□□ -0.2
NDE1-206ENST00000572967 CHST13Q8NET6 341 aa13.82□□□□□ -0.2
NDE1-206ENST00000572967 CHURC1Q8WUH1 139 aa13.82□□□□□ -0.2
NDE1-206ENST00000572967 TMEM87BQ96K49 555 aa13.82□□□□□ -0.2
NDE1-206ENST00000572967 A1CFQ9NQ94 594 aaKnown RBP13.82□□□□□ -0.2
NDE1-206ENST00000572967 FBXO40Q9UH90 709 aa13.82□□□□□ -0.2
NDE1-206ENST00000572967 PRR12Q9ULL5 1215 aa13.82□□□□□ -0.2
NDE1-206ENST00000572967 ADCY6O43306 1168 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 SNAI1O95863 264 aaPredicted RBP13.81□□□□□ -0.2
NDE1-206ENST00000572967 SLC16A2P36021 539 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 MCM2P49736 904 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 CNTN2Q02246 1040 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 MUM1L1Q5H9M0 696 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 TTBK2Q6IQ55 1244 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 RCSD1Q6JBY9 416 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 RUFY3Q7L099 469 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.81□□□□□ -0.2
NDE1-206ENST00000572967 ARMCX2Q7L311 632 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 TDHQ8IZJ6 230 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 DCAF4Q8WV16 495 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 TMEM47Q9BQJ4 181 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 ZKSCAN3Q9BRR0 538 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 ZSWIM6Q9HCJ5 1215 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 GPCPD1Q9NPB8 672 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.81□□□□□ -0.2
NDE1-206ENST00000572967 PRKAG2Q9UGJ0 569 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 CCPG1Q9ULG6 757 aa13.81□□□□□ -0.2
NDE1-206ENST00000572967 DDX49Q9Y6V7 483 aaKnown RBP13.81□□□□□ -0.2
NDE1-206ENST00000572967 A0A1W2PQ45 241 aaPredicted RBP13.8□□□□□ -0.2
NDE1-206ENST00000572967 A0A1W2PQY0 241 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 MYADML2A6NDP7 307 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 B4E1Z4 1266 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 KDM4AO75164 1064 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 FDX1P10109 184 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 TOP1P11387 765 aaKnown RBP13.8□□□□□ -0.2
NDE1-206ENST00000572967 RPS6KB1P23443 525 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 BMP8BP34820 402 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 NOVP48745 357 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 MAMDC4Q6UXC1 1216 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 SLC39A5Q6ZMH5 540 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 ZNF467Q7Z7K2 595 aaPredicted RBP13.8□□□□□ -0.2
NDE1-206ENST00000572967 RNF180Q86T96 592 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 CCDC144CPQ8IYA2 1237 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 MB21D2Q8IYB1 491 aaPredicted RBP13.8□□□□□ -0.2
NDE1-206ENST00000572967 TMTC2Q8N394 836 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 MSL3Q8N5Y2 521 aaKnown RBP13.8□□□□□ -0.2
NDE1-206ENST00000572967 TRERF1Q96PN7 1200 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 PHF24Q9UPV7 400 aa13.8□□□□□ -0.2
NDE1-206ENST00000572967 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 PRC1O43663 620 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 PLA2G6O60733 806 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 ADAMTS4O75173 837 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 PDHBP11177 359 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 ANP32AP39687 249 aaKnown RBP13.79□□□□□ -0.2
NDE1-206ENST00000572967 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
NDE1-206ENST00000572967 SNX17Q15036 470 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 SYDE2Q5VT97 1194 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 NSMFQ6X4W1 530 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 STOX1Q6ZVD7 989 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 LBHD1Q9BQE6 289 aaPredicted RBP13.79□□□□□ -0.2
NDE1-206ENST00000572967 RANBP17Q9H2T7 1088 aaKnown RBP13.79□□□□□ -0.2
NDE1-206ENST00000572967 PDLIM7Q9NR12 457 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 PDRG1Q9NUG6 133 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 TCP11L1Q9NUJ3 509 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 FAM184BQ9ULE4 1060 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 ASTN1O14525 1302 aa13.79□□□□□ -0.2
NDE1-206ENST00000572967 IFIT3O14879 490 aaKnown RBP13.78□□□□□ -0.2
NDE1-206ENST00000572967 C6orf222P0C671 652 aaPredicted RBP13.78□□□□□ -0.2
NDE1-206ENST00000572967 NEK4P51957 841 aa13.78□□□□□ -0.2
NDE1-206ENST00000572967 ACVR2BQ13705 512 aa13.78□□□□□ -0.2
NDE1-206ENST00000572967 TKFCQ3LXA3 575 aa13.78□□□□□ -0.2
NDE1-206ENST00000572967 ADCK5Q3MIX3 580 aa13.78□□□□□ -0.2
NDE1-206ENST00000572967 SYNE3Q6ZMZ3 975 aa13.78□□□□□ -0.2
NDE1-206ENST00000572967 FAM133AQ8N9E0 248 aa13.78□□□□□ -0.2
NDE1-206ENST00000572967 TTC14Q96N46 770 aa13.78□□□□□ -0.2
NDE1-206ENST00000572967 ZSCAN10Q96SZ4 725 aaPredicted RBP13.78□□□□□ -0.2
NDE1-206ENST00000572967 UPF3BQ9BZI7 483 aaKnown RBP13.78□□□□□ -0.2
NDE1-206ENST00000572967 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.77□□□□□ -0.21
NDE1-206ENST00000572967 SOWAHBA6NEL2 793 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 NFIBO00712 420 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 PQBP1O60828 265 aaKnown RBP13.77□□□□□ -0.21
NDE1-206ENST00000572967 ICAM1P05362 532 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 PTGS1P23219 599 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 WTAPQ15007 396 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 CCDC144BQ3MJ40 725 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 TMEM67Q5HYA8 995 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 SH3RF1Q7Z6J0 888 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 DGKHQ86XP1 1220 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 FBXO16Q8IX29 292 aaPredicted RBP13.77□□□□□ -0.21
NDE1-206ENST00000572967 FBXL16Q8N461 479 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 PURBQ96QR8 312 aaKnown RBP13.77□□□□□ -0.21
NDE1-206ENST00000572967 KATNBL1Q9H079 304 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 ALDH8A1Q9H2A2 487 aaPredicted RBP13.77□□□□□ -0.21
NDE1-206ENST00000572967 ABHD16BQ9H3Z7 469 aa13.77□□□□□ -0.21
NDE1-206ENST00000572967 STARD7Q9NQZ5 370 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms