RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 STOX1Q6ZVD7 989 aa9.09□□□□□ -0.95
SMG6-211ENST00000572369 DDX11Q96FC9 970 aa9.09□□□□□ -0.95
SMG6-211ENST00000572369 SLC38A10Q9HBR0 1119 aa9.09□□□□□ -0.95
SMG6-211ENST00000572369 HOMER2Q9NSB8 354 aa9.09□□□□□ -0.95
SMG6-211ENST00000572369 GJD2Q9UKL4 321 aa9.09□□□□□ -0.95
SMG6-211ENST00000572369 ZNF214Q9UL59 606 aaPredicted RBP9.09□□□□□ -0.95
SMG6-211ENST00000572369 PRR12Q9ULL5 1215 aa9.09□□□□□ -0.95
SMG6-211ENST00000572369 TAF6LQ9Y6J9 622 aa9.09□□□□□ -0.95
SMG6-211ENST00000572369 ZNF236Q9UL36 1845 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 FAM86C2PA6NEL3 165 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 CCDC69A6NI79 296 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 PRC1O43663 620 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 ST18O60284 1047 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 ALAS1P13196 640 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 OAZ1P54368 228 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 FGD1P98174 961 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 ZNF543Q08ER8 600 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 GRB14Q14449 540 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 KRT32Q14532 448 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 ASPRV1Q53RT3 343 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 MFSD14CQ5VZR4 134 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 ANKRD35Q8N283 1001 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 ANKLE1Q8NAG6 615 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 REPS2Q8NFH8 660 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 TRIB2Q92519 343 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 ANKS1AQ92625 1134 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 NEK1Q96PY6 1258 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 UBA5Q9GZZ9 404 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 VAT1LQ9HCJ6 419 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 HMX1Q9NP08 348 aaPredicted RBP9.08□□□□□ -0.96
SMG6-211ENST00000572369 PAK6Q9NQU5 681 aaPredicted RBP9.08□□□□□ -0.96
SMG6-211ENST00000572369 FBXO40Q9UH90 709 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 CCPG1Q9ULG6 757 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 ZDBF2Q9HCK1 2354 aa9.08□□□□□ -0.96
SMG6-211ENST00000572369 C5orf42Q9H799 3197 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 ATP2A1O14983 1001 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 KRT37O76014 449 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 XRCC5P13010 732 aaKnown RBP9.07□□□□□ -0.96
SMG6-211ENST00000572369 CNGA1P29973 690 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 SMAD3P84022 425 aaKnown RBP9.07□□□□□ -0.96
SMG6-211ENST00000572369 SEC23AQ15436 765 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 CCL14Q16627 93 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 CATIPQ7Z7H3 387 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 MB21D2Q8IYB1 491 aaPredicted RBP9.07□□□□□ -0.96
SMG6-211ENST00000572369 ABRAQ8N0Z2 381 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 TMTC2Q8N394 836 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 CHST13Q8NET6 341 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 NPLOC4Q8TAT6 608 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 NUP133Q8WUM0 1156 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 PPM1EQ8WY54 764 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 USP6NLQ92738 828 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 TMEM87BQ96K49 555 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 AGBL1Q96MI9 1066 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 ACAD9Q9H845 621 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 RNF146Q9NTX7 359 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 RIPK3Q9Y572 518 aa9.07□□□□□ -0.96
SMG6-211ENST00000572369 CACNA1BQ00975 2339 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 ICAM1P05362 532 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 PGK2P07205 417 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 SNHG28P0DPA3 235 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 PRKAR2AP13861 404 aaKnown RBP9.06□□□□□ -0.96
SMG6-211ENST00000572369 ANTXR2P58335 489 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 TRIM32Q13049 653 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 TKFCQ3LXA3 575 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 BTNL9Q6UXG8 535 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 SYNE3Q6ZMZ3 975 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 CTCFLQ8NI51 663 aaPredicted RBP9.06□□□□□ -0.96
SMG6-211ENST00000572369 TRERF1Q96PN7 1200 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 RANBP17Q9H2T7 1088 aaKnown RBP9.06□□□□□ -0.96
SMG6-211ENST00000572369 CPVLQ9H3G5 476 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 C11orf49Q9H6J7 331 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 PNMA2Q9UL42 364 aa9.06□□□□□ -0.96
SMG6-211ENST00000572369 NAP1L2Q9ULW6 460 aaPredicted RBP9.06□□□□□ -0.96
SMG6-211ENST00000572369 KMT2BQ9UMN6 2715 aaPredicted RBP9.05□□□□□ -0.96
SMG6-211ENST00000572369 PTPDC1A2A3K4 754 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 KLRF2D3W0D1 207 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 EIF5BO60841 1220 aaKnown RBP9.05□□□□□ -0.96
SMG6-211ENST00000572369 COBLO75128 1261 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 HMGB1P09429 215 aaKnown RBP9.05□□□□□ -0.96
SMG6-211ENST00000572369 HOXC6P09630 235 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 PSMA5P28066 241 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 CYP2C19P33261 490 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 HSPA4P34932 840 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 CACNB2Q08289 660 aaPredicted RBP9.05□□□□□ -0.96
SMG6-211ENST00000572369 GRIN2CQ14957 1233 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 USH1GQ495M9 461 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 NSMFQ6X4W1 530 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 ADGRF4Q8IZF3 695 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 ZNF654Q8IZM8 581 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 IGDCC4Q8TDY8 1250 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 MAML3Q96JK9 1138 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 JAKMIP1Q96N16 626 aaKnown RBP9.05□□□□□ -0.96
SMG6-211ENST00000572369 MTA3Q9BTC8 594 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 LRRC2Q9BYS8 371 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMG6-211ENST00000572369 LY9Q9HBG7 655 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 SENP2Q9HC62 589 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 FLRT1Q9NZU1 646 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 PFASO15067 1338 aa9.05□□□□□ -0.96
SMG6-211ENST00000572369 ZNF536O15090 1300 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms