RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 TFAP4Q01664 338 aa22.84■■□□□ 1.25
NUP88-203ENST00000572019 PSRC1Q6PGN9 363 aaPredicted RBP22.84■■□□□ 1.25
NUP88-203ENST00000572019 NOL8Q76FK4 1167 aaKnown RBP22.84■■□□□ 1.25
NUP88-203ENST00000572019 EEPD1Q7L9B9 569 aa22.84■■□□□ 1.25
NUP88-203ENST00000572019 TLK2Q86UE8 772 aa22.84■■□□□ 1.25
NUP88-203ENST00000572019 HERVK_113Q902F9 699 aa22.84■■□□□ 1.25
NUP88-203ENST00000572019 WNT8AQ9H1J5 351 aa22.84■■□□□ 1.25
NUP88-203ENST00000572019 ISY1Q9ULR0 285 aaKnown RBP22.84■■□□□ 1.25
NUP88-203ENST00000572019 PATL2C9JE40 543 aaKnown RBP22.83■■□□□ 1.25
NUP88-203ENST00000572019 FOXP2O15409 715 aa22.83■■□□□ 1.25
NUP88-203ENST00000572019 B4GALT4O60513 344 aa22.83■■□□□ 1.25
NUP88-203ENST00000572019 NMT2O60551 498 aa22.83■■□□□ 1.25
NUP88-203ENST00000572019 MCCP23508 829 aa22.83■■□□□ 1.25
NUP88-203ENST00000572019 RABGGTBP53611 331 aa22.83■■□□□ 1.25
NUP88-203ENST00000572019 CCL23P55773 120 aa22.83■■□□□ 1.25
NUP88-203ENST00000572019 CCDC174Q6PII3 467 aa22.83■■□□□ 1.25
NUP88-203ENST00000572019 KCTD1Q719H9 257 aa22.83■■□□□ 1.25
NUP88-203ENST00000572019 OTOP2Q7RTS6 562 aa22.83■■□□□ 1.25
NUP88-203ENST00000572019 FBXO16Q8IX29 292 aaPredicted RBP22.83■■□□□ 1.25
NUP88-203ENST00000572019 OTUD7AQ8TE49 926 aaPredicted RBP22.83■■□□□ 1.25
NUP88-203ENST00000572019 GAS2L1Q99501 681 aaPredicted RBP22.83■■□□□ 1.25
NUP88-203ENST00000572019 HIPK3Q9H422 1215 aa22.83■■□□□ 1.25
NUP88-203ENST00000572019 TNFRSF10AO00220 468 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 TLR3O15455 904 aaKnown RBP22.82■■□□□ 1.24
NUP88-203ENST00000572019 TSPY3P0CV98 308 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 TSPY8P0CW00 308 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 ALAS1P13196 640 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 MYOGP15173 224 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 STAT2P52630 851 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 ITGA7Q13683 1181 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 FSCN1Q16658 493 aaKnown RBP22.82■■□□□ 1.24
NUP88-203ENST00000572019 TAPT1Q6NXT6 567 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 TRERF1Q96PN7 1200 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 NOC4LQ9BVI4 516 aaKnown RBP22.82■■□□□ 1.24
NUP88-203ENST00000572019 IL17RBQ9NRM6 502 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 RCAN3Q9UKA8 241 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 SYNPO2Q9UMS6 1093 aa22.82■■□□□ 1.24
NUP88-203ENST00000572019 DYNC1LI2O43237 492 aaPredicted RBP22.81■■□□□ 1.24
NUP88-203ENST00000572019 GNAT2P19087 354 aa22.81■■□□□ 1.24
NUP88-203ENST00000572019 AKNAD1Q5T1N1 836 aa22.81■■□□□ 1.24
NUP88-203ENST00000572019 STAG1Q8WVM7 1258 aa22.81■■□□□ 1.24
NUP88-203ENST00000572019 DCTPP1Q9H773 170 aa22.81■■□□□ 1.24
NUP88-203ENST00000572019 RBAK-RBAKDNI3L0D1 243 aa22.8■■□□□ 1.24
NUP88-203ENST00000572019 ZFYP08048 801 aaPredicted RBP22.8■■□□□ 1.24
NUP88-203ENST00000572019 IGFBP4P22692 258 aa22.8■■□□□ 1.24
NUP88-203ENST00000572019 SLC1A4P43007 532 aa22.8■■□□□ 1.24
NUP88-203ENST00000572019 PPARAQ07869 468 aa22.8■■□□□ 1.24
NUP88-203ENST00000572019 SCLYQ96I15 445 aa22.8■■□□□ 1.24
NUP88-203ENST00000572019 GMCL1Q96IK5 515 aa22.8■■□□□ 1.24
NUP88-203ENST00000572019 PRRC2BQ5JSZ5 2229 aaKnown RBP22.8■■□□□ 1.24
NUP88-203ENST00000572019 FGBP02675 491 aa22.79■■□□□ 1.24
NUP88-203ENST00000572019 IKQ13123 557 aaPredicted RBP22.79■■□□□ 1.24
NUP88-203ENST00000572019 PI4K2BQ8TCG2 481 aa22.79■■□□□ 1.24
NUP88-203ENST00000572019 PPP1R13LQ8WUF5 828 aa22.79■■□□□ 1.24
NUP88-203ENST00000572019 ASB2Q96Q27 587 aa22.79■■□□□ 1.24
NUP88-203ENST00000572019 CYP39A1Q9NYL5 469 aa22.79■■□□□ 1.24
NUP88-203ENST00000572019 THEGQ9P2T0 379 aa22.79■■□□□ 1.24
NUP88-203ENST00000572019 PRR12Q9ULL5 1215 aa22.79■■□□□ 1.24
NUP88-203ENST00000572019 MTMR7Q9Y216 660 aa22.79■■□□□ 1.24
NUP88-203ENST00000572019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.79■■□□□ 1.24
NUP88-203ENST00000572019 TET1Q8NFU7 2136 aa22.78■■□□□ 1.24
NUP88-203ENST00000572019 COL9A1P20849 921 aa22.78■■□□□ 1.24
NUP88-203ENST00000572019 CTDSPL2Q05D32 466 aa22.78■■□□□ 1.24
NUP88-203ENST00000572019 FAM160B2Q86V87 743 aa22.78■■□□□ 1.24
NUP88-203ENST00000572019 ZNF287Q9HBT7 754 aa22.78■■□□□ 1.24
NUP88-203ENST00000572019 MSRAQ9UJ68 235 aa22.78■■□□□ 1.24
NUP88-203ENST00000572019 PTPRSQ13332 1948 aa22.77■■□□□ 1.24
NUP88-203ENST00000572019 ASB14A6NK59 587 aa22.77■■□□□ 1.24
NUP88-203ENST00000572019 PDE4BQ07343 736 aa22.77■■□□□ 1.24
NUP88-203ENST00000572019 RAB30Q15771 203 aa22.77■■□□□ 1.24
NUP88-203ENST00000572019 ZMYM1Q5SVZ6 1142 aa22.77■■□□□ 1.24
NUP88-203ENST00000572019 TTBK2Q6IQ55 1244 aa22.77■■□□□ 1.24
NUP88-203ENST00000572019 ADAMTS19Q8TE59 1207 aa22.77■■□□□ 1.24
NUP88-203ENST00000572019 CHURC1Q8WUH1 139 aa22.77■■□□□ 1.24
NUP88-203ENST00000572019 ATXN2LQ8WWM7 1075 aaKnown RBP22.77■■□□□ 1.24
NUP88-203ENST00000572019 NECAB3Q96P71 396 aaPredicted RBP22.77■■□□□ 1.24
NUP88-203ENST00000572019 AP5M1Q9H0R1 490 aa22.77■■□□□ 1.24
NUP88-203ENST00000572019 NAPBQ9H115 298 aa22.77■■□□□ 1.24
NUP88-203ENST00000572019 CHMP4BQ9H444 224 aaKnown RBP22.77■■□□□ 1.24
NUP88-203ENST00000572019 SCN10AQ9Y5Y9 1956 aa22.77■■□□□ 1.24
NUP88-203ENST00000572019 FDX1P10109 184 aa22.76■■□□□ 1.23
NUP88-203ENST00000572019 NSMFQ6X4W1 530 aa22.76■■□□□ 1.23
NUP88-203ENST00000572019 GPATCH3Q96I76 525 aa22.76■■□□□ 1.23
NUP88-203ENST00000572019 TRMT13Q9NUP7 481 aaKnown RBP22.76■■□□□ 1.23
NUP88-203ENST00000572019 STX8Q9UNK0 236 aa22.76■■□□□ 1.23
NUP88-203ENST00000572019 TRIP12Q14669 1992 aaPredicted RBP22.76■■□□□ 1.23
NUP88-203ENST00000572019 CABYRO75952 493 aa22.75■■□□□ 1.23
NUP88-203ENST00000572019 CYP2C9P11712 490 aa22.75■■□□□ 1.23
NUP88-203ENST00000572019 TTLL4Q14679 1199 aa22.75■■□□□ 1.23
NUP88-203ENST00000572019 TKFCQ3LXA3 575 aa22.75■■□□□ 1.23
NUP88-203ENST00000572019 RCSD1Q6JBY9 416 aa22.75■■□□□ 1.23
NUP88-203ENST00000572019 SLC28A3Q9HAS3 691 aa22.75■■□□□ 1.23
NUP88-203ENST00000572019 CCPG1Q9ULG6 757 aa22.75■■□□□ 1.23
NUP88-203ENST00000572019 TANC1Q9C0D5 1861 aa22.75■■□□□ 1.23
NUP88-203ENST00000572019 RFXAPO00287 272 aa22.74■■□□□ 1.23
NUP88-203ENST00000572019 NFIBO00712 420 aa22.74■■□□□ 1.23
NUP88-203ENST00000572019 PLA2G6O60733 806 aa22.74■■□□□ 1.23
NUP88-203ENST00000572019 SLC16A2P36021 539 aa22.74■■□□□ 1.23
NUP88-203ENST00000572019 VPS53Q5VIR6 699 aa22.74■■□□□ 1.23
NUP88-203ENST00000572019 DIEXFQ68CQ4 756 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms