RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 RANBP2P49792 3224 aaKnown RBP11.44□□□□□ -0.58
CIITA-207ENST00000571545 WDR19Q8NEZ3 1342 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 DCDC2CA8MYV0 355 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 ZEB2O60315 1214 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 IGHDP01880 384 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 CLTBP09497 229 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 C6orf222P0C671 652 aaPredicted RBP11.44□□□□□ -0.58
CIITA-207ENST00000571545 PDHBP11177 359 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 TAL1P17542 331 aaPredicted RBP11.44□□□□□ -0.58
CIITA-207ENST00000571545 ACLYP53396 1101 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 HAND2P61296 217 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 CCDC144BQ3MJ40 725 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 CCDC174Q6PII3 467 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 RUFY2Q8WXA3 655 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 FERMT2Q96AC1 680 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 KRT23Q9C075 422 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 UPF3AQ9H1J1 476 aaKnown RBP11.44□□□□□ -0.58
CIITA-207ENST00000571545 PDLIM7Q9NR12 457 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 CYP39A1Q9NYL5 469 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 MTMR7Q9Y216 660 aa11.44□□□□□ -0.58
CIITA-207ENST00000571545 A0A0U1RQG5 324 aaPredicted RBP11.43□□□□□ -0.58
CIITA-207ENST00000571545 CABYRO75952 493 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 SNHG28P0DPA3 235 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 GJA9P57773 515 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 NKX3-2P78367 333 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 ZNF543Q08ER8 600 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 KCNA10Q16322 511 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 NSMFQ6X4W1 530 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 ANKRD33Q7Z3H0 272 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 KLHDC9Q8NEP7 349 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 KAT14Q9H8E8 782 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 VTA1Q9NP79 307 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 Q9Y3F1 56 aa11.43□□□□□ -0.58
CIITA-207ENST00000571545 NEDD4P46934 1319 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 FRMPD2Q68DX3 1309 aaPredicted RBP11.42□□□□□ -0.58
CIITA-207ENST00000571545 SOX1O00570 391 aaPredicted RBP11.42□□□□□ -0.58
CIITA-207ENST00000571545 TLR3O15455 904 aaKnown RBP11.42□□□□□ -0.58
CIITA-207ENST00000571545 PQBP1O60828 265 aaKnown RBP11.42□□□□□ -0.58
CIITA-207ENST00000571545 RAG1P15918 1043 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 CNTN2Q02246 1040 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 TNFAIP2Q03169 654 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 TLE2Q04725 743 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 ASPRV1Q53RT3 343 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 GNASQ5JWF2 1037 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 NOL8Q76FK4 1167 aaKnown RBP11.42□□□□□ -0.58
CIITA-207ENST00000571545 TBC1D10CQ8IV04 446 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 LRCH3Q96II8 777 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 FGD4Q96M96 766 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 UBAC1Q9BSL1 405 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 AP5M1Q9H0R1 490 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 INCENPQ9NQS7 918 aa11.42□□□□□ -0.58
CIITA-207ENST00000571545 SUPT16HQ9Y5B9 1047 aaKnown RBP11.42□□□□□ -0.58
CIITA-207ENST00000571545 MYH6P13533 1939 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 PTPDC1A2A3K4 754 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 KIAA0355O15063 1070 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 KDM4AO75164 1064 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 ASGR1P07306 291 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 SLC16A2P36021 539 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 TRDNQ13061 729 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 BRDTQ58F21 947 aaPredicted RBP11.41□□□□□ -0.58
CIITA-207ENST00000571545 TTC22Q5TAA0 569 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 IQSEC1Q6DN90 963 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 FAM109BQ6ICB4 259 aaPredicted RBP11.41□□□□□ -0.58
CIITA-207ENST00000571545 CCSAPQ6IQ19 270 aaPredicted RBP11.41□□□□□ -0.58
CIITA-207ENST00000571545 TLK2Q86UE8 772 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 DEFB123Q8N688 67 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 PNMA1Q8ND90 353 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 DNERQ8NFT8 737 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 SPDYE1Q8NFV5 336 aaPredicted RBP11.41□□□□□ -0.58
CIITA-207ENST00000571545 MORC4Q8TE76 937 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 VTI1AQ96AJ9 217 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 LENG1Q96BZ8 264 aaPredicted RBP11.41□□□□□ -0.58
CIITA-207ENST00000571545 GPCPD1Q9NPB8 672 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 TMEM39AQ9NV64 488 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 LCTP09848 1927 aa11.41□□□□□ -0.58
CIITA-207ENST00000571545 NKRFO15226 690 aaKnown RBP eCLIP11.4□□□□□ -0.58
CIITA-207ENST00000571545 ALDH5A1P51649 535 aaPredicted RBP11.4□□□□□ -0.58
CIITA-207ENST00000571545 FPGSQ05932 587 aa11.4□□□□□ -0.58
CIITA-207ENST00000571545 TRAF1Q13077 416 aa11.4□□□□□ -0.58
CIITA-207ENST00000571545 MUM1L1Q5H9M0 696 aa11.4□□□□□ -0.58
CIITA-207ENST00000571545 TTBK2Q6IQ55 1244 aa11.4□□□□□ -0.58
CIITA-207ENST00000571545 RNF207Q6ZRF8 634 aa11.4□□□□□ -0.58
CIITA-207ENST00000571545 RGS22Q8NE09 1264 aa11.4□□□□□ -0.58
CIITA-207ENST00000571545 ANKS1AQ92625 1134 aa11.4□□□□□ -0.58
CIITA-207ENST00000571545 BADQ92934 168 aa11.4□□□□□ -0.58
CIITA-207ENST00000571545 CHMP4CQ96CF2 233 aa11.4□□□□□ -0.58
CIITA-207ENST00000571545 ZSCAN10Q96SZ4 725 aaPredicted RBP11.4□□□□□ -0.58
CIITA-207ENST00000571545 KATNBL1Q9H079 304 aa11.4□□□□□ -0.58
CIITA-207ENST00000571545 DNAH12Q6ZR08 3092 aa11.39□□□□□ -0.59
CIITA-207ENST00000571545 TNKSO95271 1327 aa11.39□□□□□ -0.59
CIITA-207ENST00000571545 ABCB11O95342 1321 aa11.39□□□□□ -0.59
CIITA-207ENST00000571545 TRIM43BA6NCK2 446 aa11.39□□□□□ -0.59
CIITA-207ENST00000571545 SOWAHBA6NEL2 793 aa11.39□□□□□ -0.59
CIITA-207ENST00000571545 B4E1Z4 1266 aa11.39□□□□□ -0.59
CIITA-207ENST00000571545 ARVCFO00192 962 aa11.39□□□□□ -0.59
CIITA-207ENST00000571545 CPT1AP50416 773 aa11.39□□□□□ -0.59
CIITA-207ENST00000571545 BAATQ14032 418 aaPredicted RBP11.39□□□□□ -0.59
CIITA-207ENST00000571545 SART3Q15020 963 aaKnown RBP11.39□□□□□ -0.59
CIITA-207ENST00000571545 FSCN1Q16658 493 aaKnown RBP11.39□□□□□ -0.59
CIITA-207ENST00000571545 ZNF697Q5TEC3 545 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms