RNA–Protein interactions for RNA: ENST00000571088.5

TRPV1-206, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,105 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-206ENST00000571088 DPH5Q9H2P9 285 aa14.97□□□□□ -0.01
TRPV1-206ENST00000571088 SPATS2LQ9NUQ6 558 aaKnown RBP14.97□□□□□ -0.01
TRPV1-206ENST00000571088 NFU1Q9UMS0 254 aa14.97□□□□□ -0.01
TRPV1-206ENST00000571088 ACTN4O43707 911 aaKnown RBP14.97□□□□□ -0.01
TRPV1-206ENST00000571088 PRR29P0C7W0 189 aa14.97□□□□□ -0.01
TRPV1-206ENST00000571088 PEX26Q7Z412 305 aa14.97□□□□□ -0.01
TRPV1-206ENST00000571088 LY9Q9HBG7 655 aa14.97□□□□□ -0.01
TRPV1-206ENST00000571088 UBN2Q6ZU65 1347 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 FAM170AA1A519 330 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 DCAF17Q5H9S7 520 aaPredicted RBP14.96□□□□□ -0.01
TRPV1-206ENST00000571088 SFMBT2Q5VUG0 894 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 UHMK1Q8TAS1 419 aaKnown RBP14.96□□□□□ -0.01
TRPV1-206ENST00000571088 C6orf50Q9HD87 102 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 NKIRAS1Q9NYS0 192 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 STIM2Q9P246 746 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 NEDD4P46934 1319 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 RGS16O15492 202 aaPredicted RBP14.96□□□□□ -0.01
TRPV1-206ENST00000571088 MOCS3O95396 460 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 PRPHP41219 470 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 IFNAR2P48551 515 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 ANTXR2P58335 489 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 ALX1Q15699 326 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 FAM212AQ96EL1 285 aa14.96□□□□□ -0.01
TRPV1-206ENST00000571088 ZRANB2O95218 330 aaKnown RBP eCLIP14.96□□□□□ -0.02
TRPV1-206ENST00000571088 FMR1Q06787 632 aaKnown RBP eCLIP14.96□□□□□ -0.02
TRPV1-206ENST00000571088 ASIC2Q16515 512 aa14.96□□□□□ -0.02
TRPV1-206ENST00000571088 TBC1D5Q92609 795 aa14.96□□□□□ -0.02
TRPV1-206ENST00000571088 NLRP3Q96P20 1036 aa14.96□□□□□ -0.02
TRPV1-206ENST00000571088 NHEJ1Q9H9Q4 299 aaPredicted RBP14.96□□□□□ -0.02
TRPV1-206ENST00000571088 BTG4Q9NY30 223 aa14.96□□□□□ -0.02
TRPV1-206ENST00000571088 L1RE1Q9UN81 338 aa14.96□□□□□ -0.02
TRPV1-206ENST00000571088 PRKAB2O43741 272 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 GSTO1P78417 241 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 CETN1Q12798 172 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 C6orf163Q5TEZ5 329 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 LRRC31Q6UY01 552 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 HNRNPLLQ8WVV9 542 aaKnown RBP14.95□□□□□ -0.02
TRPV1-206ENST00000571088 PAGE5Q96GU1 130 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 TRIM6Q9C030 488 aaPredicted RBP14.95□□□□□ -0.02
TRPV1-206ENST00000571088 KRIT1O00522 736 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 GNA11P29992 359 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 IRAK1P51617 712 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 GEMIN8Q9NWZ8 242 aaKnown RBP14.95□□□□□ -0.02
TRPV1-206ENST00000571088 HPS5Q9UPZ3 1129 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 PCP11498 1178 aaKnown RBP14.95□□□□□ -0.02
TRPV1-206ENST00000571088 TXKP42681 527 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 CCDC197Q8NCU1 140 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 PLVAPQ9BX97 442 aa14.95□□□□□ -0.02
TRPV1-206ENST00000571088 ACTR5Q9H9F9 607 aaPredicted RBP14.95□□□□□ -0.02
TRPV1-206ENST00000571088 AATFQ9NY61 560 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRPV1-206ENST00000571088 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.95□□□□□ -0.02
TRPV1-206ENST00000571088 HIP1RO75146 1068 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 ATP1A1P05023 1023 aaKnown RBP14.94□□□□□ -0.02
TRPV1-206ENST00000571088 EEF1GP26641 437 aaKnown RBP14.94□□□□□ -0.02
TRPV1-206ENST00000571088 COL9A3Q14050 684 aaPredicted RBP14.94□□□□□ -0.02
TRPV1-206ENST00000571088 DENND2CQ68D51 928 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 LCORLQ8N3X6 602 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 CNOT6LQ96LI5 555 aaKnown RBP14.94□□□□□ -0.02
TRPV1-206ENST00000571088 MMS19Q96T76 1030 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 SUFUQ9UMX1 484 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 USP17L12C9JPN9 530 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 USP17L21D6R901 530 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 CTNND1O60716 968 aaKnown RBP14.94□□□□□ -0.02
TRPV1-206ENST00000571088 ECM2O94769 699 aaPredicted RBP14.94□□□□□ -0.02
TRPV1-206ENST00000571088 RASGRF1Q13972 1273 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 DDAH1O94760 285 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 ALDH3A1P30838 453 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 TNNI2P48788 182 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 TCP11X2Q5H9J9 407 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 CABP7Q86V35 215 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 PPFIBP2Q8ND30 876 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 ZBTB1Q9Y2K1 713 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 CDHR2Q9BYE9 1310 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 SCG2P13521 617 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 HNRNPH1P31943 449 aaKnown RBP14.94□□□□□ -0.02
TRPV1-206ENST00000571088 TRAPPC10P48553 1259 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 ZBED6P86452 979 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 TRIM65Q6PJ69 517 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 ACSBG1Q96GR2 724 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 MTA3Q9BTC8 594 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 CCDC87Q9NVE4 849 aa14.94□□□□□ -0.02
TRPV1-206ENST00000571088 MROH7-TTC4A0A0A0MT08 1334 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 ESYT3A0FGR9 886 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 TBCAO75347 108 aaKnown RBP14.93□□□□□ -0.02
TRPV1-206ENST00000571088 FXR1P51114 621 aaKnown RBP eCLIP14.93□□□□□ -0.02
TRPV1-206ENST00000571088 VWA3BQ502W6 1294 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 CCDC38Q502W7 563 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 FOXR1Q6PIV2 292 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 FBXL16Q8N461 479 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 SH2D3CQ8N5H7 860 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 ANKRD42Q8N9B4 389 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 STAG1Q8WVM7 1258 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 VIPAS39Q9H9C1 493 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 SEMA3EO15041 775 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 TSNAXIP1Q2TAA8 658 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 ADAT2Q7Z6V5 191 aaKnown RBP14.93□□□□□ -0.02
TRPV1-206ENST00000571088 NBPF5PQ86XG9 351 aaPredicted RBP14.93□□□□□ -0.02
TRPV1-206ENST00000571088 SLF2Q8IX21 1173 aa14.93□□□□□ -0.02
TRPV1-206ENST00000571088 NAP1L3Q99457 506 aaPredicted RBP14.93□□□□□ -0.02
TRPV1-206ENST00000571088 CHP1Q99653 195 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms