RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 PRKAB2O43741 272 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 CYBAP13498 195 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 PDIA4P13667 645 aaKnown RBP7.8□□□□□ -1.16
SMG6-204ENST00000570606 AKR1B1P15121 316 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 CTHP32929 405 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 ADD2P35612 726 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 RTP1P59025 263 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 KCNH2Q12809 1159 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 TJAP1Q5JTD0 557 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 GJC2Q5T442 439 aaPredicted RBP7.8□□□□□ -1.16
SMG6-204ENST00000570606 ANO1Q5XXA6 986 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 OLFML2BQ68BL8 750 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 DIEXFQ68CQ4 756 aaKnown RBP7.8□□□□□ -1.16
SMG6-204ENST00000570606 SHCBP1Q8NEM2 672 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 TRPV1Q8NER1 839 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 ATG4CQ96DT6 458 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 CHMP4BQ9H444 224 aaKnown RBP7.8□□□□□ -1.16
SMG6-204ENST00000570606 VCPKMTQ9H867 229 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 PRDM5Q9NQX1 630 aaPredicted RBP7.8□□□□□ -1.16
SMG6-204ENST00000570606 ATP8A2Q9NTI2 1148 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 ATP11BQ9Y2G3 1177 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 MCM3APO60318 1980 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 A0A0C4DFX4 3053 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 CYP2D7A0A087X1C5 515 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 PALM3A6NDB9 673 aaPredicted RBP7.79□□□□□ -1.16
SMG6-204ENST00000570606 STRNO43815 780 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 CDK8P49336 464 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 SEMA3FQ13275 785 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 SLFNL1Q499Z3 407 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 KIAA1755Q5JYT7 1200 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 ZSCAN25Q6NSZ9 544 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 RETREG2Q8NC44 543 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 ARRDC4Q8NCT1 418 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 CCDC17Q96LX7 622 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 MROH8Q9H579 483 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 TMX2Q9Y320 296 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 SLC4A4Q9Y6R1 1079 aa7.79□□□□□ -1.16
SMG6-204ENST00000570606 LAMA2P24043 3122 aaKnown RBP7.79□□□□□ -1.16
SMG6-204ENST00000570606 USP17L12C9JPN9 530 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 USP17L21D6R901 530 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 DLL1O00548 723 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 SEPT4O43236 478 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 COBLO75128 1261 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 SLC25A27O95847 323 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 FCER1AP12319 257 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 ATP5JP18859 108 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 FAM47AQ5JRC9 791 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 C16orf86Q6ZW13 317 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 SIRT2Q8IXJ6 389 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 ABRAQ8N0Z2 381 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 ZNF516Q92618 1163 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 PBXIP1Q96AQ6 731 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 GPATCH3Q96I76 525 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 MMP19Q99542 508 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 HAUS7Q99871 368 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 OCSTAMPQ9BR26 566 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 TRAIPQ9BWF2 469 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 LRRCC1Q9C099 1032 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 ZBTB40Q9NUA8 1239 aa7.78□□□□□ -1.16
SMG6-204ENST00000570606 ARPP21Q9UBL0 812 aaPredicted RBP7.78□□□□□ -1.16
SMG6-204ENST00000570606 MYO9BQ13459 2157 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.77□□□□□ -1.17
SMG6-204ENST00000570606 SMIM22K7EJ46 135 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 CHGBP05060 677 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 RARBP10826 455 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 EEF2P13639 858 aaKnown RBP7.77□□□□□ -1.17
SMG6-204ENST00000570606 COPB2P35606 906 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 PTPN5P54829 565 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 KCTD2Q14681 263 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 TMEM132BQ14DG7 1078 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 LRRC41Q15345 812 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 UBE3CQ15386 1083 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 TRIM60Q495X7 471 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 FAM83BQ5T0W9 1011 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 C12orf60Q5U649 245 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 PDXDC2PQ6P474 469 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 POTEGQ6S5H5 508 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 STK11IPQ8N1F8 1099 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 ARMC2Q8NEN0 867 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 GPKOWQ92917 476 aaPredicted RBP eCLIP7.77□□□□□ -1.17
SMG6-204ENST00000570606 FERMT2Q96AC1 680 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 MAML3Q96JK9 1138 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 KANSL2Q9H9L4 492 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 IL21Q9HBE4 155 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 XPNPEP3Q9NQH7 507 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 FBXO28Q9NVF7 368 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 MTMR10Q9NXD2 777 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 RCAN3Q9UKA8 241 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 PPP1R9AQ9ULJ8 1098 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 STXBP5LQ9Y2K9 1186 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 GPSM3Q9Y4H4 160 aa7.77□□□□□ -1.17
SMG6-204ENST00000570606 ROBO3Q96MS0 1386 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 SMARCA5O60264 1052 aaPredicted RBP7.76□□□□□ -1.17
SMG6-204ENST00000570606 PGK2P07205 417 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 RFX1P22670 979 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 STAT3P40763 770 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 ADCYAP1R1P41586 468 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 TDO2P48775 406 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 PRAMEF19Q5SWL8 479 aa7.76□□□□□ -1.17
SMG6-204ENST00000570606 ZNF697Q5TEC3 545 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms