RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 NEK3P51956 506 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 STAG2Q8N3U4 1231 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 SKA1Q96BD8 255 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 MAP3K14Q99558 947 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 SH3GLB2Q9NR46 395 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 SEL1LQ9UBV2 794 aa7.49□□□□□ -1.21
SMG1-217ENST00000569764 EYA2O00167 538 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 PIP5K1CO60331 668 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 KRT10P13645 584 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 SMARCA1P28370 1054 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 TTLL7Q6ZT98 887 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 SYAP1Q96A49 352 aaPredicted RBP7.48□□□□□ -1.21
SMG1-217ENST00000569764 HVCN1Q96D96 273 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 GBP4Q96PP9 640 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 FBXO2Q9UK22 296 aaPredicted RBP7.48□□□□□ -1.21
SMG1-217ENST00000569764 PRKAB1Q9Y478 270 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 MAP3K7O43318 606 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 TIPRLO75663 272 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 HOXC6P09630 235 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 SEC13P55735 322 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 DDR1Q08345 913 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 FAAH2Q6GMR7 532 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 SSH3Q8TE77 659 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 CHURC1Q8WUH1 139 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 KIF1BPQ96EK5 621 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 PPP1R37O75864 691 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 PDE1AP54750 535 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 KIF23Q02241 960 aaPredicted RBP7.48□□□□□ -1.21
SMG1-217ENST00000569764 MTMR3Q13615 1198 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 SH3D19Q5HYK7 790 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 CPXCR1Q8N123 301 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 SUCLG2Q96I99 432 aa7.48□□□□□ -1.21
SMG1-217ENST00000569764 NUP188Q5SRE5 1749 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 LBX1P52954 281 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 FKBP1CQ5VVH2 108 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 UBR7Q8N806 425 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 SOCS4Q8WXH5 440 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 SLC4A9Q96Q91 983 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 CPSF2Q9P2I0 782 aaKnown RBP7.47□□□□□ -1.21
SMG1-217ENST00000569764 LAMB4A4D0S4 1761 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 ZKSCAN1P17029 563 aaPredicted RBP7.47□□□□□ -1.21
SMG1-217ENST00000569764 STIP1P31948 543 aaKnown RBP7.47□□□□□ -1.21
SMG1-217ENST00000569764 KIF5BP33176 963 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 RFC5P40937 340 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 PTK7Q13308 1070 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 TBC1D16Q8TBP0 767 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 NELL2Q99435 816 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.47□□□□□ -1.21
SMG1-217ENST00000569764 HOXC10Q9NYD6 342 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 HERC5Q9UII4 1024 aaKnown RBP7.47□□□□□ -1.21
SMG1-217ENST00000569764 SUFUQ9UMX1 484 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 TJP1Q07157 1748 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 TRIM64A6NGJ6 449 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 TRIM64BA6NI03 449 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 SNX2O60749 519 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 VCAM1P19320 739 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 GNL2Q13823 731 aaKnown RBP7.47□□□□□ -1.21
SMG1-217ENST00000569764 NECAB2Q7Z6G3 386 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 SLAIN1Q8ND83 568 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 CDCA5Q96FF9 252 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 TIGD1Q96MW7 591 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 NUDT12Q9BQG2 462 aa7.47□□□□□ -1.21
SMG1-217ENST00000569764 SLKQ9H2G2 1235 aaPredicted RBP7.47□□□□□ -1.21
SMG1-217ENST00000569764 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.47□□□□□ -1.21
SMG1-217ENST00000569764 RASA4BC9J798 803 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 H3BRB1 525 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 PSMD14O00487 310 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 ENTPD3O75355 529 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 LGR5O75473 907 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 PLS1Q14651 629 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 KRT77Q7Z794 578 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 IQCA1Q86XH1 822 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 MYLK4Q86YV6 388 aaPredicted RBP7.46□□□□□ -1.21
SMG1-217ENST00000569764 DCLK2Q8N568 766 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 JMYQ8N9B5 988 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 WRNIP1Q96S55 665 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 SLC39A3Q9BRY0 314 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 NACA2Q9H009 215 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 TUT1Q9H6E5 874 aaKnown RBP7.46□□□□□ -1.21
SMG1-217ENST00000569764 TMEM165Q9HC07 324 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 LUZP4Q9P127 313 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 TLL2Q9Y6L7 1015 aa7.46□□□□□ -1.21
SMG1-217ENST00000569764 TCP10L2B9ZVM9 353 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 KIF3CO14782 793 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 SLC4A1P02730 911 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 YBX3P16989 372 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMG1-217ENST00000569764 AMHR2Q16671 573 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 PARD3BQ8TEW8 1205 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 GLULP15104 373 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 CYP7A1P22680 504 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 ATP6V1E1P36543 226 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 RGS2P41220 211 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 RASA3Q14644 834 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 SAMD3Q8N6K7 520 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 CHMP5Q9NZZ3 219 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 ADD3Q9UEY8 706 aaKnown RBP7.46□□□□□ -1.22
SMG1-217ENST00000569764 ABCC12Q96J65 1359 aa7.46□□□□□ -1.22
SMG1-217ENST00000569764 USP17L5A8MUK1 530 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 RASA4O43374 803 aa7.45□□□□□ -1.22
SMG1-217ENST00000569764 KRT38O76015 456 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms