RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 SKAP1Q86WV1 359 aa9.19□□□□□ -0.94
CDH3-209ENST00000569080 PNMA1Q8ND90 353 aa9.19□□□□□ -0.94
CDH3-209ENST00000569080 KLHDC9Q8NEP7 349 aa9.19□□□□□ -0.94
CDH3-209ENST00000569080 MORC4Q8TE76 937 aa9.19□□□□□ -0.94
CDH3-209ENST00000569080 PURBQ96QR8 312 aaKnown RBP9.19□□□□□ -0.94
CDH3-209ENST00000569080 ZSCAN10Q96SZ4 725 aaPredicted RBP9.19□□□□□ -0.94
CDH3-209ENST00000569080 UPF3AQ9H1J1 476 aaKnown RBP9.19□□□□□ -0.94
CDH3-209ENST00000569080 CPVLQ9H3G5 476 aa9.19□□□□□ -0.94
CDH3-209ENST00000569080 ABHD16BQ9H3Z7 469 aa9.19□□□□□ -0.94
CDH3-209ENST00000569080 GPCPD1Q9NPB8 672 aa9.19□□□□□ -0.94
CDH3-209ENST00000569080 ZSWIM5Q9P217 1185 aa9.19□□□□□ -0.94
CDH3-209ENST00000569080 CTNNA3Q9UI47 895 aa9.19□□□□□ -0.94
CDH3-209ENST00000569080 ZHX1Q9UKY1 873 aaPredicted RBP9.19□□□□□ -0.94
CDH3-209ENST00000569080 CDH23Q9H251 3354 aa9.19□□□□□ -0.94
CDH3-209ENST00000569080 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.18□□□□□ -0.94
CDH3-209ENST00000569080 A0A1W2PQ45 241 aaPredicted RBP9.18□□□□□ -0.94
CDH3-209ENST00000569080 A0A1W2PQY0 241 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 SOX1O00570 391 aaPredicted RBP9.18□□□□□ -0.94
CDH3-209ENST00000569080 DUSP11O75319 330 aaKnown RBP9.18□□□□□ -0.94
CDH3-209ENST00000569080 GOLGA8HP0CJ92 632 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 MYH6P13533 1939 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 PTGS1P23219 599 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 ADCYAP1R1P41586 468 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 CCDC144BQ3MJ40 725 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 TRIM60Q495X7 471 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 GPATCH4Q5T3I0 446 aaKnown RBP9.18□□□□□ -0.94
CDH3-209ENST00000569080 SLC39A5Q6ZMH5 540 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 IQCA1Q86XH1 822 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 KRT23Q9C075 422 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 CNNM2Q9H8M5 875 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 PDLIM7Q9NR12 457 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 FAM184BQ9ULE4 1060 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 EYSQ5T1H1 3165 aa9.18□□□□□ -0.94
CDH3-209ENST00000569080 EDNRBP24530 442 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 GJA9P57773 515 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 COL9A3Q14050 684 aaPredicted RBP9.17□□□□□ -0.94
CDH3-209ENST00000569080 CDC37Q16543 378 aaPredicted RBP9.17□□□□□ -0.94
CDH3-209ENST00000569080 SLC35G1Q2M3R5 365 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 ASPRV1Q53RT3 343 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 CCDC178Q5BJE1 867 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 TAPT1Q6NXT6 567 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 NSMFQ6X4W1 530 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 RNF180Q86T96 592 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 RUFY2Q8WXA3 655 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 MAP4K1Q92918 833 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 FERMT2Q96AC1 680 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 KAT14Q9H8E8 782 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 SENP2Q9HC62 589 aa9.17□□□□□ -0.94
CDH3-209ENST00000569080 GNEQ9Y223 722 aaKnown RBP9.17□□□□□ -0.94
CDH3-209ENST00000569080 U3KPZ7 1027 aaPredicted RBP9.17□□□□□ -0.94
CDH3-209ENST00000569080 MOXD2PA6NHM9 499 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 ASB14A6NK59 587 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 MYCNP04198 464 aaPredicted RBP9.16□□□□□ -0.94
CDH3-209ENST00000569080 ALDH5A1P51649 535 aaPredicted RBP9.16□□□□□ -0.94
CDH3-209ENST00000569080 ACLYP53396 1101 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 ANTXR2P58335 489 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 RPS6P62753 249 aaKnown RBP9.16□□□□□ -0.94
CDH3-209ENST00000569080 BAATQ14032 418 aaPredicted RBP9.16□□□□□ -0.94
CDH3-209ENST00000569080 TMEM63BQ5T3F8 832 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 SH3RF1Q7Z6J0 888 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 FBXO16Q8IX29 292 aaPredicted RBP9.16□□□□□ -0.94
CDH3-209ENST00000569080 MB21D2Q8IYB1 491 aaPredicted RBP9.16□□□□□ -0.94
CDH3-209ENST00000569080 ADGRF4Q8IZF3 695 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 STAG2Q8N3U4 1231 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 MTMR8Q96EF0 704 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 UBAC1Q9BSL1 405 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 TSEN34Q9BSV6 310 aaKnown RBP9.16□□□□□ -0.94
CDH3-209ENST00000569080 UBA5Q9GZZ9 404 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 LSG1Q9H089 658 aaKnown RBP9.16□□□□□ -0.94
CDH3-209ENST00000569080 PNMA2Q9UL42 364 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 ATP11BQ9Y2G3 1177 aa9.16□□□□□ -0.94
CDH3-209ENST00000569080 LOC102724159A0A0B4J2E5 919 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 TRIM43BA6NCK2 446 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 E7EWF7 191 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 OPLAHO14841 1288 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 PPP1R11O60927 126 aaPredicted RBP9.15□□□□□ -0.94
CDH3-209ENST00000569080 SMPD1P17405 629 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 ITGB8P26012 769 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 MDM2Q00987 491 aaPredicted RBP9.15□□□□□ -0.94
CDH3-209ENST00000569080 PWP2Q15269 919 aaKnown RBP9.15□□□□□ -0.94
CDH3-209ENST00000569080 KCNA10Q16322 511 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 QRICH1Q2TAL8 776 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 LRIT3Q3SXY7 679 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 BMP2KLQ5H9B9 411 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 IFIT1BQ5T764 474 aaKnown RBP9.15□□□□□ -0.94
CDH3-209ENST00000569080 CENPQQ7L2Z9 268 aaPredicted RBP9.15□□□□□ -0.94
CDH3-209ENST00000569080 ANKRD33Q7Z3H0 272 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 TLK2Q86UE8 772 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 TDHQ8IZJ6 230 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 TRIM43Q96BQ3 446 aaPredicted RBP9.15□□□□□ -0.94
CDH3-209ENST00000569080 LRCH3Q96II8 777 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 ESYT1Q9BSJ8 1104 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 JMJD4Q9H9V9 463 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 VTA1Q9NP79 307 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 PDGFCQ9NRA1 345 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 COL20A1Q9P218 1284 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 MAD2L2Q9UI95 211 aa9.15□□□□□ -0.94
CDH3-209ENST00000569080 RBM8AQ9Y5S9 174 aaKnown RBP9.15□□□□□ -0.94
CDH3-209ENST00000569080 ABCB11O95342 1321 aa9.14□□□□□ -0.95
CDH3-209ENST00000569080 SCN10AQ9Y5Y9 1956 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms