RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 ABHD16BQ9H3Z7 469 aa23.58■■□□□ 1.37
ABCA3-206ENST00000569062 RBM8AQ9Y5S9 174 aaKnown RBP23.58■■□□□ 1.37
ABCA3-206ENST00000569062 MYH6P13533 1939 aa23.58■■□□□ 1.37
ABCA3-206ENST00000569062 ADCY6O43306 1168 aa23.57■■□□□ 1.36
ABCA3-206ENST00000569062 ADCYAP1R1P41586 468 aa23.57■■□□□ 1.36
ABCA3-206ENST00000569062 BAATQ14032 418 aaPredicted RBP23.57■■□□□ 1.36
ABCA3-206ENST00000569062 FERMT2Q96AC1 680 aa23.57■■□□□ 1.36
ABCA3-206ENST00000569062 ADAMTS4O75173 837 aa23.56■■□□□ 1.36
ABCA3-206ENST00000569062 SLC34A2O95436 690 aa23.56■■□□□ 1.36
ABCA3-206ENST00000569062 CCDC144BQ3MJ40 725 aa23.56■■□□□ 1.36
ABCA3-206ENST00000569062 ASPRV1Q53RT3 343 aa23.56■■□□□ 1.36
ABCA3-206ENST00000569062 BMP2KLQ5H9B9 411 aa23.56■■□□□ 1.36
ABCA3-206ENST00000569062 ADGRF4Q8IZF3 695 aa23.56■■□□□ 1.36
ABCA3-206ENST00000569062 CLEC4DQ8WXI8 215 aa23.56■■□□□ 1.36
ABCA3-206ENST00000569062 ESYT1Q9BSJ8 1104 aa23.56■■□□□ 1.36
ABCA3-206ENST00000569062 LSG1Q9H089 658 aaKnown RBP23.56■■□□□ 1.36
ABCA3-206ENST00000569062 WDR19Q8NEZ3 1342 aa23.56■■□□□ 1.36
ABCA3-206ENST00000569062 SYNRGQ9UMZ2 1314 aa23.56■■□□□ 1.36
ABCA3-206ENST00000569062 PARP1P09874 1014 aaKnown RBP23.55■■□□□ 1.36
ABCA3-206ENST00000569062 SLC39A5Q6ZMH5 540 aa23.55■■□□□ 1.36
ABCA3-206ENST00000569062 CHST3Q7LGC8 479 aa23.55■■□□□ 1.36
ABCA3-206ENST00000569062 RALYLQ86SE5 291 aaKnown RBP23.55■■□□□ 1.36
ABCA3-206ENST00000569062 RNF180Q86T96 592 aa23.55■■□□□ 1.36
ABCA3-206ENST00000569062 NCOA7Q8NI08 942 aa23.55■■□□□ 1.36
ABCA3-206ENST00000569062 PTPDC1A2A3K4 754 aa23.54■■□□□ 1.36
ABCA3-206ENST00000569062 ASB14A6NK59 587 aa23.54■■□□□ 1.36
ABCA3-206ENST00000569062 IRX5P78411 483 aaPredicted RBP23.54■■□□□ 1.36
ABCA3-206ENST00000569062 CDC37Q16543 378 aaPredicted RBP23.54■■□□□ 1.36
ABCA3-206ENST00000569062 USH1GQ495M9 461 aa23.54■■□□□ 1.36
ABCA3-206ENST00000569062 KIAA1211Q6ZU35 1233 aa23.54■■□□□ 1.36
ABCA3-206ENST00000569062 STAG2Q8N3U4 1231 aa23.54■■□□□ 1.36
ABCA3-206ENST00000569062 SENP2Q9HC62 589 aa23.54■■□□□ 1.36
ABCA3-206ENST00000569062 PHF24Q9UPV7 400 aa23.54■■□□□ 1.36
ABCA3-206ENST00000569062 IFIT3O14879 490 aaKnown RBP23.53■■□□□ 1.36
ABCA3-206ENST00000569062 DUSP11O75319 330 aaKnown RBP23.53■■□□□ 1.36
ABCA3-206ENST00000569062 RTP1P59025 263 aa23.53■■□□□ 1.36
ABCA3-206ENST00000569062 SLC30A10Q6XR72 485 aa23.53■■□□□ 1.36
ABCA3-206ENST00000569062 CCDC136Q96JN2 1154 aa23.53■■□□□ 1.36
ABCA3-206ENST00000569062 GDF15Q99988 308 aa23.53■■□□□ 1.36
ABCA3-206ENST00000569062 VAT1LQ9HCJ6 419 aa23.53■■□□□ 1.36
ABCA3-206ENST00000569062 PNMA2Q9UL42 364 aa23.53■■□□□ 1.36
ABCA3-206ENST00000569062 TRIOBPQ9H2D6 2365 aa23.53■■□□□ 1.36
ABCA3-206ENST00000569062 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.52■■□□□ 1.36
ABCA3-206ENST00000569062 MYADML2A6NDP7 307 aa23.52■■□□□ 1.36
ABCA3-206ENST00000569062 CALML3P27482 149 aa23.52■■□□□ 1.36
ABCA3-206ENST00000569062 FXR1P51114 621 aaKnown RBP eCLIP23.52■■□□□ 1.36
ABCA3-206ENST00000569062 ANTXR2P58335 489 aa23.52■■□□□ 1.36
ABCA3-206ENST00000569062 RNF207Q6ZRF8 634 aa23.52■■□□□ 1.36
ABCA3-206ENST00000569062 EEPD1Q7L9B9 569 aa23.52■■□□□ 1.36
ABCA3-206ENST00000569062 KLHDC9Q8NEP7 349 aa23.52■■□□□ 1.36
ABCA3-206ENST00000569062 JMJD4Q9H9V9 463 aa23.52■■□□□ 1.36
ABCA3-206ENST00000569062 MAD2L2Q9UI95 211 aa23.52■■□□□ 1.36
ABCA3-206ENST00000569062 ATP11BQ9Y2G3 1177 aa23.52■■□□□ 1.36
ABCA3-206ENST00000569062 DHX16O60231 1041 aaKnown RBP23.51■■□□□ 1.35
ABCA3-206ENST00000569062 MAGEA10P43363 369 aaPredicted RBP23.51■■□□□ 1.35
ABCA3-206ENST00000569062 ALDH5A1P51649 535 aaPredicted RBP23.51■■□□□ 1.35
ABCA3-206ENST00000569062 RPS6P62753 249 aaKnown RBP23.51■■□□□ 1.35
ABCA3-206ENST00000569062 SNX17Q15036 470 aa23.51■■□□□ 1.35
ABCA3-206ENST00000569062 MB21D2Q8IYB1 491 aaPredicted RBP23.51■■□□□ 1.35
ABCA3-206ENST00000569062 A0A1W2PQ45 241 aaPredicted RBP23.5■■□□□ 1.35
ABCA3-206ENST00000569062 A0A1W2PQY0 241 aa23.5■■□□□ 1.35
ABCA3-206ENST00000569062 ERICH2A1L162 156 aa23.5■■□□□ 1.35
ABCA3-206ENST00000569062 WTAPQ15007 396 aa23.5■■□□□ 1.35
ABCA3-206ENST00000569062 QRICH1Q2TAL8 776 aa23.5■■□□□ 1.35
ABCA3-206ENST00000569062 TRIM60Q495X7 471 aa23.5■■□□□ 1.35
ABCA3-206ENST00000569062 CCSAPQ6IQ19 270 aaPredicted RBP23.5■■□□□ 1.35
ABCA3-206ENST00000569062 FBXO16Q8IX29 292 aaPredicted RBP23.5■■□□□ 1.35
ABCA3-206ENST00000569062 MORC4Q8TE76 937 aa23.5■■□□□ 1.35
ABCA3-206ENST00000569062 ANO2Q9NQ90 1003 aa23.5■■□□□ 1.35
ABCA3-206ENST00000569062 PDGFCQ9NRA1 345 aa23.5■■□□□ 1.35
ABCA3-206ENST00000569062 ADD3Q9UEY8 706 aaKnown RBP23.5■■□□□ 1.35
ABCA3-206ENST00000569062 PALM3A6NDB9 673 aaPredicted RBP23.49■■□□□ 1.35
ABCA3-206ENST00000569062 KLRF2D3W0D1 207 aa23.49■■□□□ 1.35
ABCA3-206ENST00000569062 SLC27A2O14975 620 aa23.49■■□□□ 1.35
ABCA3-206ENST00000569062 C6orf222P0C671 652 aaPredicted RBP23.49■■□□□ 1.35
ABCA3-206ENST00000569062 ACLYP53396 1101 aa23.49■■□□□ 1.35
ABCA3-206ENST00000569062 GJA9P57773 515 aa23.49■■□□□ 1.35
ABCA3-206ENST00000569062 TNFAIP2Q03169 654 aa23.49■■□□□ 1.35
ABCA3-206ENST00000569062 KCNA10Q16322 511 aa23.49■■□□□ 1.35
ABCA3-206ENST00000569062 TAPT1Q6NXT6 567 aa23.49■■□□□ 1.35
ABCA3-206ENST00000569062 IGDCC4Q8TDY8 1250 aa23.49■■□□□ 1.35
ABCA3-206ENST00000569062 TBC1D5Q92609 795 aa23.49■■□□□ 1.35
ABCA3-206ENST00000569062 TSEN34Q9BSV6 310 aaKnown RBP23.49■■□□□ 1.35
ABCA3-206ENST00000569062 UPF3AQ9H1J1 476 aaKnown RBP23.49■■□□□ 1.35
ABCA3-206ENST00000569062 LTBP2Q14767 1821 aa23.48■■□□□ 1.35
ABCA3-206ENST00000569062 PTGS1P23219 599 aa23.48■■□□□ 1.35
ABCA3-206ENST00000569062 BMP8BP34820 402 aa23.48■■□□□ 1.35
ABCA3-206ENST00000569062 COL9A3Q14050 684 aaPredicted RBP23.48■■□□□ 1.35
ABCA3-206ENST00000569062 GRM4Q14833 912 aa23.48■■□□□ 1.35
ABCA3-206ENST00000569062 SART3Q15020 963 aaKnown RBP23.48■■□□□ 1.35
ABCA3-206ENST00000569062 NECTIN1Q15223 517 aa23.48■■□□□ 1.35
ABCA3-206ENST00000569062 TMEM67Q5HYA8 995 aa23.48■■□□□ 1.35
ABCA3-206ENST00000569062 TMEM63BQ5T3F8 832 aa23.48■■□□□ 1.35
ABCA3-206ENST00000569062 ABCB11O95342 1321 aa23.48■■□□□ 1.35
ABCA3-206ENST00000569062 SZT2Q5T011 3432 aa23.47■■□□□ 1.35
ABCA3-206ENST00000569062 CTAGE5O15320 804 aa23.47■■□□□ 1.35
ABCA3-206ENST00000569062 SMPD1P17405 629 aa23.47■■□□□ 1.35
ABCA3-206ENST00000569062 CST5P28325 142 aaPredicted RBP23.47■■□□□ 1.35
ABCA3-206ENST00000569062 MDM2Q00987 491 aaPredicted RBP23.47■■□□□ 1.35
ABCA3-206ENST00000569062 SLC35G1Q2M3R5 365 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms