RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 CCDC144CPQ8IYA2 1237 aa29.46■■■□□ 2.31
FANCA-228ENST00000567943 UBA5Q9GZZ9 404 aa29.46■■■□□ 2.31
FANCA-228ENST00000567943 RBM27Q9P2N5 1060 aaKnown RBP29.46■■■□□ 2.31
FANCA-228ENST00000567943 NFIBO00712 420 aa29.45■■■□□ 2.31
FANCA-228ENST00000567943 RARBP10826 455 aa29.45■■■□□ 2.31
FANCA-228ENST00000567943 AKR1A1P14550 325 aa29.45■■■□□ 2.31
FANCA-228ENST00000567943 ACVR2BQ13705 512 aa29.45■■■□□ 2.31
FANCA-228ENST00000567943 CLEC4DQ8WXI8 215 aa29.45■■■□□ 2.31
FANCA-228ENST00000567943 XPNPEP3Q9NQH7 507 aa29.45■■■□□ 2.31
FANCA-228ENST00000567943 ZMYND8Q9ULU4 1186 aaPredicted RBP29.45■■■□□ 2.31
FANCA-228ENST00000567943 SLC34A2O95436 690 aa29.44■■■□□ 2.3
FANCA-228ENST00000567943 PGK1P00558 417 aa29.44■■■□□ 2.3
FANCA-228ENST00000567943 NCOA7Q8NI08 942 aa29.44■■■□□ 2.3
FANCA-228ENST00000567943 ZHX1Q9UKY1 873 aaPredicted RBP29.44■■■□□ 2.3
FANCA-228ENST00000567943 MYH6P13533 1939 aa29.43■■■□□ 2.3
FANCA-228ENST00000567943 MYCNP04198 464 aaPredicted RBP29.43■■■□□ 2.3
FANCA-228ENST00000567943 ATN1P54259 1190 aaPredicted RBP29.43■■■□□ 2.3
FANCA-228ENST00000567943 IFIT1BQ5T764 474 aaKnown RBP29.43■■■□□ 2.3
FANCA-228ENST00000567943 NSMFQ6X4W1 530 aa29.43■■■□□ 2.3
FANCA-228ENST00000567943 ABHD16BQ9H3Z7 469 aa29.43■■■□□ 2.3
FANCA-228ENST00000567943 SENP2Q9HC62 589 aa29.43■■■□□ 2.3
FANCA-228ENST00000567943 ADAMTS4O75173 837 aa29.42■■■□□ 2.3
FANCA-228ENST00000567943 SYN1P17600 705 aa29.42■■■□□ 2.3
FANCA-228ENST00000567943 WDR19Q8NEZ3 1342 aa29.42■■■□□ 2.3
FANCA-228ENST00000567943 KBTBD13C9JR72 458 aa29.41■■■□□ 2.3
FANCA-228ENST00000567943 ADCYAP1R1P41586 468 aa29.41■■■□□ 2.3
FANCA-228ENST00000567943 BAATQ14032 418 aaPredicted RBP29.41■■■□□ 2.3
FANCA-228ENST00000567943 CCDC144BQ3MJ40 725 aa29.41■■■□□ 2.3
FANCA-228ENST00000567943 ASPRV1Q53RT3 343 aa29.41■■■□□ 2.3
FANCA-228ENST00000567943 FAM184BQ9ULE4 1060 aa29.41■■■□□ 2.3
FANCA-228ENST00000567943 SYNRGQ9UMZ2 1314 aa29.41■■■□□ 2.3
FANCA-228ENST00000567943 IFIT3O14879 490 aaKnown RBP29.4■■■□□ 2.3
FANCA-228ENST00000567943 SLC27A2O14975 620 aa29.4■■■□□ 2.3
FANCA-228ENST00000567943 IRX5P78411 483 aaPredicted RBP29.4■■■□□ 2.3
FANCA-228ENST00000567943 CHST3Q7LGC8 479 aa29.4■■■□□ 2.3
FANCA-228ENST00000567943 ADGRF4Q8IZF3 695 aa29.4■■■□□ 2.3
FANCA-228ENST00000567943 STAG2Q8N3U4 1231 aa29.4■■■□□ 2.3
FANCA-228ENST00000567943 PARP1P09874 1014 aaKnown RBP29.39■■■□□ 2.3
FANCA-228ENST00000567943 ANTXR2P58335 489 aa29.39■■■□□ 2.3
FANCA-228ENST00000567943 COL9A3Q14050 684 aaPredicted RBP29.39■■■□□ 2.3
FANCA-228ENST00000567943 NECTIN1Q15223 517 aa29.39■■■□□ 2.3
FANCA-228ENST00000567943 CREB3L3Q68CJ9 461 aa29.39■■■□□ 2.3
FANCA-228ENST00000567943 SLC39A5Q6ZMH5 540 aa29.39■■■□□ 2.3
FANCA-228ENST00000567943 FERMT2Q96AC1 680 aa29.39■■■□□ 2.3
FANCA-228ENST00000567943 GDF15Q99988 308 aa29.39■■■□□ 2.3
FANCA-228ENST00000567943 PHF24Q9UPV7 400 aa29.39■■■□□ 2.3
FANCA-228ENST00000567943 ERICH2A1L162 156 aa29.38■■■□□ 2.29
FANCA-228ENST00000567943 DUSP11O75319 330 aaKnown RBP29.38■■■□□ 2.29
FANCA-228ENST00000567943 SNX17Q15036 470 aa29.38■■■□□ 2.29
FANCA-228ENST00000567943 CCSAPQ6IQ19 270 aaPredicted RBP29.38■■■□□ 2.29
FANCA-228ENST00000567943 SLC30A10Q6XR72 485 aa29.38■■■□□ 2.29
FANCA-228ENST00000567943 MB21D2Q8IYB1 491 aaPredicted RBP29.38■■■□□ 2.29
FANCA-228ENST00000567943 KLHDC9Q8NEP7 349 aa29.38■■■□□ 2.29
FANCA-228ENST00000567943 MYADML2A6NDP7 307 aa29.37■■■□□ 2.29
FANCA-228ENST00000567943 ASB14A6NK59 587 aa29.37■■■□□ 2.29
FANCA-228ENST00000567943 FXR1P51114 621 aaKnown RBP eCLIP29.37■■■□□ 2.29
FANCA-228ENST00000567943 RTP1P59025 263 aa29.37■■■□□ 2.29
FANCA-228ENST00000567943 CDC37Q16543 378 aaPredicted RBP29.37■■■□□ 2.29
FANCA-228ENST00000567943 RNF180Q86T96 592 aa29.37■■■□□ 2.29
FANCA-228ENST00000567943 MORC4Q8TE76 937 aa29.37■■■□□ 2.29
FANCA-228ENST00000567943 JMJD4Q9H9V9 463 aa29.37■■■□□ 2.29
FANCA-228ENST00000567943 MAD2L2Q9UI95 211 aa29.37■■■□□ 2.29
FANCA-228ENST00000567943 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.36■■■□□ 2.29
FANCA-228ENST00000567943 SART3Q15020 963 aaKnown RBP29.36■■■□□ 2.29
FANCA-228ENST00000567943 SLC35G1Q2M3R5 365 aa29.36■■■□□ 2.29
FANCA-228ENST00000567943 USH1GQ495M9 461 aa29.36■■■□□ 2.29
FANCA-228ENST00000567943 PNMA2Q9UL42 364 aa29.36■■■□□ 2.29
FANCA-228ENST00000567943 BAZ2BQ9UIF8 2168 aaKnown RBP29.36■■■□□ 2.29
FANCA-228ENST00000567943 PTPDC1A2A3K4 754 aa29.35■■■□□ 2.29
FANCA-228ENST00000567943 PTGS1P23219 599 aa29.35■■■□□ 2.29
FANCA-228ENST00000567943 RPS6P62753 249 aaKnown RBP29.35■■■□□ 2.29
FANCA-228ENST00000567943 WTAPQ15007 396 aa29.35■■■□□ 2.29
FANCA-228ENST00000567943 IGDCC4Q8TDY8 1250 aa29.35■■■□□ 2.29
FANCA-228ENST00000567943 LAMA2P24043 3122 aaKnown RBP29.34■■■□□ 2.29
FANCA-228ENST00000567943 PALM3A6NDB9 673 aaPredicted RBP29.34■■■□□ 2.29
FANCA-228ENST00000567943 CTAGE5O15320 804 aa29.34■■■□□ 2.29
FANCA-228ENST00000567943 MAGEA10P43363 369 aaPredicted RBP29.34■■■□□ 2.29
FANCA-228ENST00000567943 QRICH1Q2TAL8 776 aa29.34■■■□□ 2.29
FANCA-228ENST00000567943 TMEM67Q5HYA8 995 aa29.34■■■□□ 2.29
FANCA-228ENST00000567943 TMEM63BQ5T3F8 832 aa29.34■■■□□ 2.29
FANCA-228ENST00000567943 TAPT1Q6NXT6 567 aa29.34■■■□□ 2.29
FANCA-228ENST00000567943 RNF207Q6ZRF8 634 aa29.34■■■□□ 2.29
FANCA-228ENST00000567943 UPF3AQ9H1J1 476 aaKnown RBP29.34■■■□□ 2.29
FANCA-228ENST00000567943 VAT1LQ9HCJ6 419 aa29.34■■■□□ 2.29
FANCA-228ENST00000567943 PDGFCQ9NRA1 345 aa29.34■■■□□ 2.29
FANCA-228ENST00000567943 A0A1W2PQ45 241 aaPredicted RBP29.33■■■□□ 2.29
FANCA-228ENST00000567943 A0A1W2PQY0 241 aa29.33■■■□□ 2.29
FANCA-228ENST00000567943 CALML3P27482 149 aa29.33■■■□□ 2.29
FANCA-228ENST00000567943 ALDH5A1P51649 535 aaPredicted RBP29.33■■■□□ 2.29
FANCA-228ENST00000567943 GJA9P57773 515 aa29.33■■■□□ 2.29
FANCA-228ENST00000567943 TROAPQ12815 778 aa29.33■■■□□ 2.29
FANCA-228ENST00000567943 RNF20Q5VTR2 975 aa29.33■■■□□ 2.29
FANCA-228ENST00000567943 C1orf53Q5VUE5 145 aa29.33■■■□□ 2.29
FANCA-228ENST00000567943 EEPD1Q7L9B9 569 aa29.33■■■□□ 2.29
FANCA-228ENST00000567943 FBXO16Q8IX29 292 aaPredicted RBP29.33■■■□□ 2.29
FANCA-228ENST00000567943 TBC1D5Q92609 795 aa29.33■■■□□ 2.29
FANCA-228ENST00000567943 TSEN34Q9BSV6 310 aaKnown RBP29.33■■■□□ 2.29
FANCA-228ENST00000567943 GPHNQ9NQX3 736 aaPredicted RBP29.33■■■□□ 2.29
FANCA-228ENST00000567943 LTBP2Q14767 1821 aa29.33■■■□□ 2.29
FANCA-228ENST00000567943 KLRF2D3W0D1 207 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms