RNA–Protein interactions for RNA: ENST00000567710.5

NSMCE1-213, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 472 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-213ENST00000567710 Q6ZUG5 572 aa12.5□□□□□ -0.41
NSMCE1-213ENST00000567710 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
NSMCE1-213ENST00000567710 CLEC4DQ8WXI8 215 aa12.5□□□□□ -0.41
NSMCE1-213ENST00000567710 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.5□□□□□ -0.41
NSMCE1-213ENST00000567710 ZSWIM6Q9HCJ5 1215 aa12.5□□□□□ -0.41
NSMCE1-213ENST00000567710 PAK6Q9NQU5 681 aaPredicted RBP12.5□□□□□ -0.41
NSMCE1-213ENST00000567710 BRPF3Q9ULD4 1205 aa12.5□□□□□ -0.41
NSMCE1-213ENST00000567710 PFASO15067 1338 aa12.5□□□□□ -0.41
NSMCE1-213ENST00000567710 RPTORQ8N122 1335 aa12.5□□□□□ -0.41
NSMCE1-213ENST00000567710 ABCB11O95342 1321 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 KLF18A0A0U1RQI7 1052 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 POTEB2H3BUK9 544 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 ZBTB5O15062 677 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 PLEKHA8P1O95397 391 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 GJB1P08034 283 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 GNAQP50148 359 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 CNTN2Q02246 1040 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 NSMFQ6X4W1 530 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 RUFY3Q7L099 469 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 FBXO11Q86XK2 927 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 HOMER1Q86YM7 354 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 FBXL16Q8N461 479 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 FAM133AQ8N9E0 248 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 FANCBQ8NB91 859 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 BRF1Q92994 677 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 FGD4Q96M96 766 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 PIGSQ96S52 555 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 SPZ1Q9BXG8 430 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 AGXT2Q9BYV1 514 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 TM6SF1Q9BZW5 370 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 HMX1Q9NP08 348 aaPredicted RBP12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 CYP39A1Q9NYL5 469 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 SMCHD1A6NHR9 2005 aa12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 MKI67P46013 3256 aaKnown RBP12.49□□□□□ -0.41
NSMCE1-213ENST00000567710 ZBTB43O43298 467 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 PPP1R11O60927 126 aaPredicted RBP12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 CYBAP13498 195 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 EN2P19622 333 aaPredicted RBP12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 CCND3P30281 292 aaPredicted RBP12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 GJA8P48165 433 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 ANAPC15P60006 121 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 APOBRQ0VD83 1088 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 BAATQ14032 418 aaPredicted RBP12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 TMTC3Q6ZXV5 915 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 ZNF467Q7Z7K2 595 aaPredicted RBP12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 CMTR1Q8N1G2 835 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 SRBD1Q8N5C6 995 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 TRPV1Q8NER1 839 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 SHISA4Q96DD7 197 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 DEFB118Q96PH6 123 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 LZTS2Q9BRK4 669 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 TINF2Q9BSI4 451 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 AMNQ9BXJ7 453 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 UPF3BQ9BZI7 483 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 CYP46A1Q9Y6A2 500 aa12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 ZNFX1Q9P2E3 1918 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 RBBP6Q7Z6E9 1792 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-213ENST00000567710 SYNGAP1Q96PV0 1343 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 PNMA6FA0A0J9YX94 578 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 PTPDC1A2A3K4 754 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 GOLGA8AA7E2F4 631 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 GOLGA8BA8MQT2 603 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 SMARCA1P28370 1054 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 RCAN1P53805 252 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 RTN1Q16799 776 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 MAMDC4Q6UXC1 1216 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 SLC30A10Q6XR72 485 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 MSL3Q8N5Y2 521 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 U2AF1L4Q8WU68 220 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 PIBF1Q8WXW3 757 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 RBM28Q9NW13 759 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 NAP1L2Q9ULW6 460 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 MRPL11Q9Y3B7 192 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 PCDHA1Q9Y5I3 950 aa12.47□□□□□ -0.41
NSMCE1-213ENST00000567710 PLXNA1Q9UIW2 1896 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 BAZ2BQ9UIF8 2168 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 ASTN1O14525 1302 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 SOWAHBA6NEL2 793 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 SGPL1O95470 568 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 CALML3P27482 149 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 RGS19P49795 217 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 METAP2P50579 478 aaKnown RBP eCLIP12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 RPS6P62753 249 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 TOB2Q14106 344 aaPredicted RBP12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 PRAMEF19Q5SWL8 479 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 RNF207Q6ZRF8 634 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 ARMCX2Q7L311 632 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 CCDC82Q8N4S0 544 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 RGS22Q8NE09 1264 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 RRP36Q96EU6 259 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 IL17RAQ96F46 866 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 PURBQ96QR8 312 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 FAM217BQ9NTX9 383 aaPredicted RBP12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 NRBP1Q9UHY1 535 aa12.46□□□□□ -0.41
NSMCE1-213ENST00000567710 NID2Q14112 1375 aa12.45□□□□□ -0.42
NSMCE1-213ENST00000567710 CNTNAP5Q8WYK1 1306 aa12.45□□□□□ -0.42
NSMCE1-213ENST00000567710 OPLAHO14841 1288 aa12.45□□□□□ -0.42
NSMCE1-213ENST00000567710 SNAI1O95863 264 aaPredicted RBP12.45□□□□□ -0.42
NSMCE1-213ENST00000567710 CNGA1P29973 690 aa12.45□□□□□ -0.42
NSMCE1-213ENST00000567710 CDC27P30260 824 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms